DN617919

Overview
NameDN617919
Unique NameDN617919
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: CP11A_CAPHI (Cholesterol side-chain cleavage enzyme, mitochondrial OS=Capra hircus GN=CYP11A1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.800e-14
Identity = 53/163 (32.52%), Postives = 86/163 (52.76%), Query Frame = -3
Query:  241 SLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHL----PYIQAIIKESLRIHPPIPLISRKAVEDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATLAAMIQCFNFKV 717
            +L+W L E+     V    Q+ L + V   R   E D+  +    P ++A IKE+LR+HP    + R    D  + +Y+IP  T++ V +++MGRDP  + NP +F P R+L +     D   +H++ L FG G R C G  +A  E+   L  +++  NFK+
Sbjct:  333 TLQWHLYEMARSLNV----QEMLREEVLNARRQAEGDISKMLQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSNPDKFDPTRWLGK-----DKDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILE--NFKI 484          
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: CP11A_BOVIN (Cholesterol side-chain cleavage enzyme, mitochondrial OS=Bos taurus GN=CYP11A1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.800e-14
Identity = 54/163 (33.13%), Postives = 87/163 (53.37%), Query Frame = -3
Query:  241 SLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHL----PYIQAIIKESLRIHPPIPLISRKAVEDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATLAAMIQCFNFKV 717
            +L+W L E+     V    Q+ L + V   R   E D+  +    P ++A IKE+LR+HP    + R    D  + +Y+IP  T++ V +++MGRDP  + +P +F P R+LS+     D   +H++ L FG G R C G  +A  E+   L  +++  NFKV
Sbjct:  333 TLQWHLYEMARSLNV----QEMLREEVLNARRQAEGDISKMLQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSK-----DKDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILE--NFKV 484          
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: C13A1_CAEEL (Putative cytochrome P450 CYP13A1 OS=Caenorhabditis elegans GN=cyp-13A1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.800e-14
Identity = 48/160 (30.00%), Postives = 88/160 (55.00%), Query Frame = -3
Query:  244 SLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLI-SRKAVEDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLE-FQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATLAAMIQCFNFK 717
            SL ++   L  HP + ++ Q+E+++    N  V    +  L Y++ + KE+LR++P      SR+ + + K+GN  +   T++ V+ W++  DP IW +  E F+PER+ + ++ +I  K     ++PFG G R C G+ LA  E    L  +++ F F+
Sbjct:  334 SLSYATYLLATHPEIQKKLQEEVNRECP-NPEVTIDQLSKLKYMECVFKEALRLYPLGAFANSRRCMRNTKLGNMKVEVGTMIQVDTWTLHTDPNIWGDDAEDFKPERWQTPNSDQIYQKS---GYIPFGLGPRQCIGMRLAYMEEKILLVHILRKFTFE 489          
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: CP4B1_RABIT (Cytochrome P450 4B1 OS=Oryctolagus cuniculus GN=CYP4B1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.964e-14
Identity = 42/160 (26.25%), Postives = 81/160 (50.62%), Query Frame = -3
Query:  241 LEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLISRKAVEDCK-IGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLH-YQFLPFGTGRRGCPGLSLAMQELPATLAAMIQCFNFKV 714
            + W L  +  +P   Q  ++E+ +++G     Q  D+  + Y+   +KE  R++PP+P + R+  +    +    +P  +++ ++++++ R+  +W +P  F P RF  +++S     G H Y F+PF  G R C G   AM E+    A  +  F F V
Sbjct:  319 ISWFLYCMALYPEHQQRCREEVREILGDQDSFQWEDLAKMTYLTMCMKECFRLYPPVPQVYRQLSKPVSFVDGRSLPAGSLISLHIYALHRNSDVWPDPEVFDPLRFSPENSS-----GRHPYAFIPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFSV 473          
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: CP4A6_RABIT (Cytochrome P450 4A6 OS=Oryctolagus cuniculus GN=CYP4A6 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.964e-14
Identity = 48/176 (27.27%), Postives = 78/176 (44.32%), Query Frame = -3
Query:  190 LEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLISRKAVEDCKI-GNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATLAAMIQCFNFKVTSPDGVVDMTERPGLAS 714
            + W    L  HP      ++E+  ++G    +    +  +PY    IKE+LR++PP+P + R+            +PK  ++ ++++++  +PK+W NP  F P  F   S          + FLPF  G R C G   AM EL   +A  +  F   +  P  V D   R  L S
Sbjct:  330 ISWIFYALATHPEHQHRCREEIQGLLGDGASITWEHLDQMPYTTMCIKEALRLYPPVPGVGRQLSSPVTFPDGRSLPKGVIVTLSIYALHHNPKVWPNPEVFDPFPFAPGSARH------SHAFLPFSGGPRNCIGKQFAMNELKVAVALTLVRFEL-LPDPKRVPDQKPRLVLKS 498          
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: CP19A_TAEGU (Cytochrome P450 19A1 OS=Taeniopygia guttata GN=CYP19A1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.964e-14
Identity = 52/154 (33.77%), Postives = 83/154 (53.90%), Query Frame = -3
Query:  259 SLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLISRKAVEDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPE-RFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATLAAMIQ 717
            +L + L  +  HP V +E  +E++ VVG +R +Q  D+P+L  ++  I ES+R  P + LI RKA++D  I  Y + K T + +N+  M        + LEF P+    S  N E +V   ++Q  PFG G R C G  +AM  + A L  +++
Sbjct:  314 TLFFMLILIAEHPTVEEEMMREIETVVG-DRDIQSDDMPNLKIVENFIYESMRYQPVVDLIMRKALQDDVIDGYPVKKGTNIILNIGRM--------HKLEFFPKPNEFSLENFEKNVPSRYFQ--PFGFGPRSCVGKFIAMVMMKAILVTLLR 456          
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: C521A_DICDI (Probable cytochrome P450 521A1 OS=Dictyostelium discoideum GN=cyp521a1 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.964e-14
Identity = 59/172 (34.30%), Postives = 86/172 (50.00%), Query Frame = -3
Query:  223 WSLAELINHPMVLQEAQQELDQVV---GRNRLVQESDVPHLPYIQAIIKESLRIHPPIPL-ISRKAVEDCKIGNYVIPKDTVLFVNLW-SMGRDPKIWKNPLEFQPERFLSQSNSEIDVK-----GLHYQFLPFGTGRRGCPGLSLAMQELPATLAAMIQCFNFKVTSPDGV 708
            W    +IN+  V  +  QE+ +V+   GR+ +  E D+  LPYI  IIKE  RIHP  PL + R A+ D  I  Y IPK   +F N + ++    K    P + +PER++       D K      L    LPF +G R CPG+  A  EL    + +I   NF ++SP+ +
Sbjct:  299 WFFVLMINYQDVQLKGYQEIIKVLECTGRDHVTIE-DIDKLPYIDGIIKEISRIHPAGPLSVPRTAINDIMINGYFIPKGCHVFQNTYGAVYNYMKESDEPCKMKPERWIENEKLRKDGKLDPTNDLALISLPFSSGIRNCPGVGFAEYELFLLFSNII--LNFHLSSPNNL 467          
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: C520B_DICDI (Putative cytochrome P450 520B1 OS=Dictyostelium discoideum GN=cyp520b1 PE=5 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.964e-14
Identity = 54/175 (30.86%), Postives = 91/175 (52.00%), Query Frame = -3
Query:  235 LEWSLAELINHPMVLQEAQQELDQVVGRN-RLVQESDVPHLPYIQAIIKESLRIHPPIPL-ISRKAVEDCKIGNYV-IPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQ-SNSEIDVKG-----------LHYQFLPFGTGRRGCPGLSLAMQELPATLAAMIQCFNFKVTS 714
            L+W +   IN+P + ++   E+ +VVG++ ++++   +  +PY+    +ESLRI P  PL + R A  D  I + + IPK   +  N++ MG D K    P +F+PER++    N +++  G           L    +PFG G+R C  LS AM E  + L+      N+K+ S
Sbjct:  280 LQWFVLFCINYPEIQEKLYNEIIEVVGKDCKVLKYEHISKMPYLYGCFRESLRIRPVTPLSLPRVAKCDTYIKDDIFIPKGATIIQNIFGMGNDEKYISEPNKFKPERWVEYIKNKKVNKNGNENSVNKYFNDLDKISIPFGVGKRQC--LSPAMAEQESLLSIATVVLNYKLKS 452          
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: C11B1_PIG (Cytochrome P450 11B1, mitochondrial OS=Sus scrofa GN=CYP11B1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.964e-14
Identity = 48/151 (31.79%), Postives = 76/151 (50.33%), Query Frame = -3
Query:  253 SLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLISRKAVEDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATLAAMIQCF 705
            +L EL  +P V Q  +QE      R     +  +  LP ++A +KE+LR++P    + R    D  + NY IP  T++ V L+S+GR+P ++  P  + P+R+L    S     G  +  L FG G R C G  LA  E+   L  +++ F
Sbjct:  326 TLFELARNPEVQQALRQESLAAAARISENPQKAITELPLLRAALKETLRLYPVGIFLDRCVTSDLVLQNYHIPAGTLVKVLLYSLGRNPAVFARPERYHPQRWLDNQGS-----GTRFPHLAFGFGMRQCLGRRLAQVEMLLLLHHVLKNF 471          
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: CP6D1_MUSDO (Cytochrome P450 6d1 OS=Musca domestica GN=CYP6D1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.483e-14
Identity = 44/163 (26.99%), Postives = 87/163 (53.37%), Query Frame = -3
Query:  244 WSLAELINHPMVLQEAQQELDQVVGRN------RLVQESDVPHLPYIQAIIKESLRIHPPIPLISRKAVEDCKIGN--YVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATLAAMIQCFNFK 708
            +++ EL  +P +L++AQ E+D+ + R+      RL  E+ +  + Y+   + E+ R +P +P ++RK  +D ++ +    IPK+T + ++L  + RDP+ +  P +++PERF  +S            ++PFG G R C    + +      LA ++  FN +
Sbjct:  329 FTIYELAMYPEILKKAQSEVDECLQRHGLKPQGRLTYEA-IQDMKYLDLCVMETTRKYPGLPFLNRKCTQDFQVPDTKLTIPKETGIIISLLGIHRDPQYFPQPEDYRPERFADESKDYDPA-----AYMPFGEGPRHCIAQRMGVMNSKVALAKILANFNIQ 485          
The following BLAST results are available for this feature:
BLAST of DN617919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP11A_CAPHI3.800e-1432.52Cholesterol side-chain cleavage enzyme, mitochondr... [more]
CP11A_BOVIN3.800e-1433.13Cholesterol side-chain cleavage enzyme, mitochondr... [more]
C13A1_CAEEL3.800e-1430.00Putative cytochrome P450 CYP13A1 OS=Caenorhabditis... [more]
CP4B1_RABIT4.964e-1426.25Cytochrome P450 4B1 OS=Oryctolagus cuniculus GN=CY... [more]
CP4A6_RABIT4.964e-1427.27Cytochrome P450 4A6 OS=Oryctolagus cuniculus GN=CY... [more]
CP19A_TAEGU4.964e-1433.77Cytochrome P450 19A1 OS=Taeniopygia guttata GN=CYP... [more]
C521A_DICDI4.964e-1434.30Probable cytochrome P450 521A1 OS=Dictyostelium di... [more]
C520B_DICDI4.964e-1430.86Putative cytochrome P450 520B1 OS=Dictyostelium di... [more]
C11B1_PIG4.964e-1431.79Cytochrome P450 11B1, mitochondrial OS=Sus scrofa ... [more]
CP6D1_MUSDO6.483e-1426.99Cytochrome P450 6d1 OS=Musca domestica GN=CYP6D1 P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01N20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001N20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617919 ID=DN617919; Name=DN617919; organism=Citrus sinensis; type=EST; length=719bp
TTTTTTTTAATAAAAATGTAATTTTTATTATATTAACCGGTTAAAAACCG
GTTGTACCGGTTGCATGCCAACGCTGTATGAGATACACGCTGCATGGTAG
GTTGACTGTTAATTTCAACGTACATCCTAATTTAGGATACTAGGAGCACA
ACGTGCAACTGGTACACACACAAGATCCTGTGCTCTTGGAGATGCTAATC
CTGGGCGTTCAGTCATATCAACCACACCATCCGGACTCGTTACTTTGAAA
TTGAAGCACTGAATCATAGCTGCTAGAGTTGCTGGCAACTCTTGCATGGC
TAAAGAAAGGCCAGGGCAGCCTCTTCTCCCAGTTCCAAATGGCAGGAATT
GGTAATGCAATCCCTTAACGTCAATCTCACTATTTGACTGTGATAAGAAC
CGTTCTGGCTGAAATTCCAATGGGTTCTTCCAAATTTTGGGGTCCCTACC
CATGGACCAAAGGTTCACAAACAACACAGTGTCTTTAGGAATTACGTAGT
TGCCAATTTTACAGTCTTCTACTGCTTTCCTGCTAATCAATGGAATTGGT
GGATGAATCCGCAATGATTCTTTAATGATGGCTTGAATATAGGGGAGATG
AGGAACGTCAGATTCTTGAACAAGCCTGTTTCTTCCCACAACTTGATCAA
GCTCTTGCTGTGCTTCCTGAAGCACCATTGGATGGTTTATGAGCTCTGCC
AATGACCATTCCAATGACG
back to top