DN617910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RB11A_RABIT (Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2 SV=3) HSP 1 Score: 226.868 bits (577), Expect = 5.482e-59 Identity = 107/161 (66.46%), Postives = 137/161 (85.09%), Query Frame = 2 Query: 80 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVE 162
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RB11A_PONAB (Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3) HSP 1 Score: 226.868 bits (577), Expect = 5.482e-59 Identity = 107/161 (66.46%), Postives = 137/161 (85.09%), Query Frame = 2 Query: 80 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVE 162
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RB11A_PIG (Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3) HSP 1 Score: 226.868 bits (577), Expect = 5.482e-59 Identity = 107/161 (66.46%), Postives = 137/161 (85.09%), Query Frame = 2 Query: 80 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVE 162
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RB11A_MOUSE (Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3) HSP 1 Score: 226.868 bits (577), Expect = 5.482e-59 Identity = 107/161 (66.46%), Postives = 137/161 (85.09%), Query Frame = 2 Query: 80 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVE 162
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RB11A_HUMAN (Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3) HSP 1 Score: 226.868 bits (577), Expect = 5.482e-59 Identity = 107/161 (66.46%), Postives = 137/161 (85.09%), Query Frame = 2 Query: 80 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVE 162
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3) HSP 1 Score: 226.868 bits (577), Expect = 5.482e-59 Identity = 107/161 (66.46%), Postives = 137/161 (85.09%), Query Frame = 2 Query: 80 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL LRAVPT++A+ FA++ L F+ETSAL++TNVE Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVE 162
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2) HSP 1 Score: 226.483 bits (576), Expect = 7.160e-59 Identity = 108/154 (70.13%), Postives = 133/154 (86.36%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 DY+FKVVLIGDS VGKS LL+RF RNEFS++SK+TIGVEF T++L +D K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL ELR H D NIV+ML+GNK DL L AV T++ + FA+RE+L+FMETSALE+TNVE Sbjct: 12 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVE 165
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 7.160e-59 Identity = 108/158 (68.35%), Postives = 133/158 (84.18%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 + + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GNK DL LRAV +D +++E L F+ETSALEATN+E Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIE 163
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 225.713 bits (574), Expect = 1.221e-58 Identity = 107/161 (66.46%), Postives = 136/161 (84.47%), Query Frame = 2 Query: 80 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 G + + DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +D KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML+GNK DL LRAVPT++A+ FA++ L F+ETSAL+ TNVE Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVE 162
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 1.595e-58 Identity = 108/154 (70.13%), Postives = 131/154 (85.06%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 DY+FK VLIGDS VGKS LL RF RNEF+++SK+TIGVEF T+ + +D+K +KAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+TK+ SFD++ RWL ELR HAD NIVIML+GNK DL LRAV TE+AQ FA NL F+ETSA++A+NVE Sbjct: 8 DYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVE 161 The following BLAST results are available for this feature:
BLAST of DN617910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617910 ID=DN617910; Name=DN617910; organism=Citrus sinensis; type=EST; length=565bpback to top |