DN617910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 1.595e-58 Identity = 109/158 (68.99%), Postives = 133/158 (84.18%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 + + DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF TK+L+ID K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+ RWL ELR H D NIV+MLIGNK DL L V TED + FA++E+L+FMETSALEATNVE Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVE 164
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 2.083e-58 Identity = 108/161 (67.08%), Postives = 135/161 (83.85%), Query Frame = 2 Query: 80 GDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 G + + Y+FK+VLIGDS VGKS +L+RF RN FS+DSK+TIGVEF TK+L ++ KT+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQSFD++ RWL ELR HAD +IVIM++GNK DL LRAV ++ + A++E LFF+ETSA+EA NVE Sbjct: 3 GRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVE 163
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 2.721e-58 Identity = 107/158 (67.72%), Postives = 136/158 (86.08%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 + + DY+FK+VLIGDS VGKS LL+RF +NEF+++SK+TIGVEF TK+L+ID+K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +++++ RWL ELR H D NIV+MLIGNK DL L AV T++A+ A+RE L+FMETSALEATNVE Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVE 164
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 8.753e-57 Identity = 104/155 (67.10%), Postives = 132/155 (85.16%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVET 565 +Y+FK+V+IGDSAVGKS LL R+ARNEF+ +SKATIGVEFQT+++ ID K VKAQIWDTAGQER+RAVTSAYYRGAVGA++VYD+T+ +F+++ RWLDEL H+D + MLIGNKCDL S+RAV E+ + A+ E LFFMETSAL++TNV+T Sbjct: 10 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKT 164
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 1.493e-56 Identity = 102/155 (65.81%), Postives = 134/155 (86.45%), Query Frame = 2 Query: 101 DYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVET 565 +Y+FK+V+IGDSAVGKS LL+R+ARNEFS +SKATIGVEFQT+++ I+ K VKAQIWDTAGQER+RAVTSAYYRGAVGA++VYD+T+R +F+ + RWLDEL+ H+D + ML+GNKCDL ++RAV E+ + A+ E LFF+ETSAL++TNV+T Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKT 164
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 1.950e-56 Identity = 106/158 (67.09%), Postives = 130/158 (82.28%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 + + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQIWDTAGQERYRA+TSAYYRGAVGA+L YD+TKRQ+FD++ RWL ELR H D NIVI+L GNK DL LRAV +D Q ++E L F+ETSALEA NV+ Sbjct: 6 DHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVD 163
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: YPT31_YEAST (GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae GN=YPT31 PE=1 SV=3) HSP 1 Score: 213.386 bits (542), Expect = 6.273e-55 Identity = 102/160 (63.75%), Postives = 127/160 (79.38%), Query Frame = 2 Query: 83 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 DY D +FK+VLIGDS VGKS LL+RF +NEF++DSK+TIGVEF T+TL ID K +KAQIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD N+ + LIGNK DL LRAVPTE+++ FAQ L F ETSAL + NV+ Sbjct: 5 DYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVD 164
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 9.058e-54 Identity = 97/157 (61.78%), Postives = 133/157 (84.71%), Query Frame = 2 Query: 92 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 ++ DY++K+VLIGDS VGKS LL+RF RNEFS+++K+TIGVEF T+T+ + KT+KAQ+WDTAGQERYRA+TSAYYRGAVGA+LVYD+ K+ ++ + RW+ ELR +AD+NI IML+GNK DL LR V T++A+EF+++ L F+ETSAL+++NVE Sbjct: 8 EEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVE 164
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: YPT32_YEAST (GTP-binding protein YPT32/YPT11 OS=Saccharomyces cerevisiae GN=YPT32 PE=1 SV=3) HSP 1 Score: 208.379 bits (529), Expect = 2.018e-53 Identity = 96/160 (60.00%), Postives = 127/160 (79.38%), Query Frame = 2 Query: 83 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 DY DY+FK+VLIGDS VGKS LL+RF +EF+++SK+TIGVEF T+T+ +++K +KAQIWDTAGQERYRA+TSAYYRGAVGA++VYD++K S+++ WL ELR +AD N+ + LIGNK DL LRAVPT++A+ FA + F ETSAL + NV+ Sbjct: 5 DYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVD 164
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB25_HUMAN (Ras-related protein Rab-25 OS=Homo sapiens GN=RAB25 PE=1 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 3.805e-52 Identity = 101/160 (63.12%), Postives = 125/160 (78.12%), Query Frame = 2 Query: 83 DYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 DYN +VFKVVLIG+S VGK+ LL+RF RNEFS DS+ TIGVEF T+T+ + VKAQIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ + RWL EL HA+ IV+ML+GNK DL R VPTE+A+ FA+ L F+ETSAL++TNVE Sbjct: 8 DYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVE 163 The following BLAST results are available for this feature:
BLAST of DN617910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617910 ID=DN617910; Name=DN617910; organism=Citrus sinensis; type=EST; length=565bpback to top |