DN617910

Overview
NameDN617910
Unique NameDN617910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length565
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RASH_MSVNS (GTPase HRas OS=Murine sarcoma virus NS.C58 GN=H-RAS PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.790e-16
Identity = 50/152 (32.89%), Postives = 86/152 (56.58%), Query Frame = 2
Query:  110 FKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADK-NIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562
            +K+V++G   VGKS L  +  +N F  +   TI   ++ K + ID +T    I DTAGQE Y A+   Y R   G + V+ +   +SF+ + ++ ++++   D  ++ ++L+GNKCDL + R V +  AQ+ A+   + ++ETSA     VE
Sbjct:    4 YKLVVVGARGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAA-RTVESRQAQDLARSYGIPYIETSAKTRQGVE 153          
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RABM_DICDI (Ras-related protein RabM OS=Dictyostelium discoideum GN=rabM PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 9.790e-16
Identity = 43/157 (27.39%), Postives = 86/157 (54.78%), Query Frame = 2
Query:  113 KVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSL-RAVPTEDAQEFAQR-------ENLFFMETSALEATNV 559
            K++ +GDS VGK+ +   F   ++ ++ + T+   F +KTL+I+++ V   +WDT  QER+  ++  YYR +    L +D+   +SF ++ +W+DE R      +  +LIG K D+    +++  E  +++ +        + + + ETSA  + N+
Sbjct:    7 KIITLGDSYVGKTSVFNNFVTGKYEIN-ECTVSPSFYSKTLTIENEPVILNVWDTCSQERFNGLSPIYYRWSNCYTLCFDIHNEKSFKNLDKWMDEARKFCIGKVPFVLIGTKKDIPRTDKSISKERIEQWCKNIEDQGIIDRVHYFETSAKFSQNI 162          
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAS_LENED (Ras-like protein OS=Lentinula edodes PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.279e-15
Identity = 50/152 (32.89%), Postives = 80/152 (52.63%), Query Frame = 2
Query:  110 FKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDE-LRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562
            +K+V++G   VGKS L  +F ++ F  +   TI   ++ K   ID +     + DTAGQE Y A+   Y R   G +LVY +T R SF+ ++ +  + LR        ++++ NKCDL   R V   + ++ A+     F+ETSA    NV+
Sbjct:   11 YKLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYR-KQCVIDDEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRNSFEEISTFHQQILRVKDQDTFPVVVVANKCDLEYERQVGMNEGRDLARHFGCKFVETSAKVRINVD 161          
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RASN_PONAB (GTPase NRas OS=Pongo abelii GN=NRAS PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.279e-15
Identity = 52/152 (34.21%), Postives = 84/152 (55.26%), Query Frame = 2
Query:  110 FKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADK-NIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562
            +K+V++G   VGKS L  +  +N F  +   TI   ++ K + ID +T    I DTAGQE Y A+   Y R   G + V+ +   +SF  +  + ++++   D  ++ ++L+GNKCDL + R V T+ A E A+   + F+ETSA     VE
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGLLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPT-RTVDTKQAHELAKSYGIPFIETSAKTRQGVE 153          
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAP2A_PONAB (Ras-related protein Rap-2a OS=Pongo abelii GN=RAP2A PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.279e-15
Identity = 50/152 (32.89%), Postives = 79/152 (51.97%), Query Frame = 2
Query:  110 FKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDE-LRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562
            +KVV++G   VGKS L  +F    F      TI  +F  K + +D      +I DTAG E++ ++   Y +   G +LVY +  +QSF  +    D+ +R    + + ++L+GNK DL S R V + + +  A+     FMETSA   T V+
Sbjct:    4 YKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSNEGRALAEEWGCPFMETSAKSKTMVD 154          
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAP2A_MOUSE (Ras-related protein Rap-2a OS=Mus musculus GN=Rap2a PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.279e-15
Identity = 50/152 (32.89%), Postives = 79/152 (51.97%), Query Frame = 2
Query:  110 FKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDE-LRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562
            +KVV++G   VGKS L  +F    F      TI  +F  K + +D      +I DTAG E++ ++   Y +   G +LVY +  +QSF  +    D+ +R    + + ++L+GNK DL S R V + + +  A+     FMETSA   T V+
Sbjct:    4 YKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSNEGRALAEEWGCPFMETSAKSKTMVD 154          
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAP2A_HUMAN (Ras-related protein Rap-2a OS=Homo sapiens GN=RAP2A PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.279e-15
Identity = 50/152 (32.89%), Postives = 79/152 (51.97%), Query Frame = 2
Query:  110 FKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDE-LRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562
            +KVV++G   VGKS L  +F    F      TI  +F  K + +D      +I DTAG E++ ++   Y +   G +LVY +  +QSF  +    D+ +R    + + ++L+GNK DL S R V + + +  A+     FMETSA   T V+
Sbjct:    4 YKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSSEGRALAEEWGCPFMETSAKSKTMVD 154          
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: DJ27A_XENLA (DnaJ homolog subfamily C member 27-A OS=Xenopus laevis GN=dnajc27-A PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.279e-15
Identity = 44/149 (29.53%), Postives = 82/149 (55.03%), Query Frame = 2
Query:  113 KVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELR------GHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSA 541
            KV+ +G++ VGKS ++ R+    F    +ATIG+++    + I  + +K  I+D AG   +  V + +Y+   G +LVYD+  +++F+ +  WL E++      G+ D NIV  +  NK D    R+V   + + +++ +   + ETSA
Sbjct:   18 KVISMGNAEVGKSCIIKRYCEKRFVPKYQATIGIDYGVTKVHIKDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGHKETFESLDGWLAEMKQELGPQGNID-NIVFAVCANKIDSTKHRSVDESEGRLWSESKGFLYFETSA 165          
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RRAS_MOUSE (Ras-related protein R-Ras OS=Mus musculus GN=Rras PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.670e-15
Identity = 50/151 (33.11%), Postives = 81/151 (53.64%), Query Frame = 2
Query:  113 KVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADK-NIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562
            K+V++G   VGKS L  +F ++ F  D   TI   + TK  ++D    +  I DTAGQE + A+   Y R   G +LV+ +  RQSF+ + +   ++    D+ +  I+L+GNK DL + R V   +A  F+   ++ + E SA    NV+
Sbjct:   31 KLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSY-TKICTVDGIPARLDILDTAGQEEFGAMREQYMRAGNGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPIVLVGNKADLENQRQVLRSEASSFSASHHMTYFEASAKLRLNVD 180          
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RASY_DICDI (Ras-like protein rasY OS=Dictyostelium discoideum GN=rasY PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.670e-15
Identity = 52/159 (32.70%), Postives = 84/159 (52.83%), Query Frame = 2
Query:   89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADK-NIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562
            N+    + K+ ++GD  VGK+ +  +F  N F      TI   ++ + L ID +     I DTAGQ+   A+   + R   G +LVY +T R SFD +  + +++    D+ ++ IM+IGNK DL   R V  ++ ++ A+   + FME SA    NVE
Sbjct:    4 NKSNGNLVKLCIMGDGGVGKTSVTIQFISNHFVHYYDPTIEDSYRKQCL-IDDQVYMLDILDTAGQDELTAMRDQWIRSCEGFILVYSVTSRSSFDQVQFFREQIIRVLDRDDVPIMMIGNKSDLDDERQVTFQEGKDLARCLGMSFMEVSAKTRLNVE 161          
The following BLAST results are available for this feature:
BLAST of DN617910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RASH_MSVNS9.790e-1632.89GTPase HRas OS=Murine sarcoma virus NS.C58 GN=H-RA... [more]
RABM_DICDI9.790e-1627.39Ras-related protein RabM OS=Dictyostelium discoide... [more]
RAS_LENED1.279e-1532.89Ras-like protein OS=Lentinula edodes PE=3 SV=1[more]
RASN_PONAB1.279e-1534.21GTPase NRas OS=Pongo abelii GN=NRAS PE=2 SV=1[more]
RAP2A_PONAB1.279e-1532.89Ras-related protein Rap-2a OS=Pongo abelii GN=RAP2... [more]
RAP2A_MOUSE1.279e-1532.89Ras-related protein Rap-2a OS=Mus musculus GN=Rap2... [more]
RAP2A_HUMAN1.279e-1532.89Ras-related protein Rap-2a OS=Homo sapiens GN=RAP2... [more]
DJ27A_XENLA1.279e-1529.53DnaJ homolog subfamily C member 27-A OS=Xenopus la... [more]
RRAS_MOUSE1.670e-1533.11Ras-related protein R-Ras OS=Mus musculus GN=Rras ... [more]
RASY_DICDI1.670e-1532.70Ras-like protein rasY OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01N16_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001N16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617910 ID=DN617910; Name=DN617910; organism=Citrus sinensis; type=EST; length=565bp
TTGATTTTATGCGAATCTTTAGAGGAAATTAGGTTTATATAGCAATTGTT
TGGTGGCGTCGACGATGTCAAATTTGTACGGAGATTACAATCAAAAGATT
GATTATGTATTCAAAGTTGTATTAATAGGGGATTCGGCGGTGGGGAAATC
ACAGCTACTGGCGCGTTTTGCTAGAAATGAATTCAGCGTCGATTCCAAGG
CCACGATTGGTGTCGAATTTCAAACCAAAACCCTTTCCATTGATCACAAA
ACTGTCAAAGCTCAGATTTGGGACACTGCCGGCCAAGAAAGGTACAGGGC
TGTGACAAGCGCATATTACCGAGGAGCAGTTGGGGCAATGTTAGTTTATG
ACATGACGAAGCGTCAGTCATTTGACCACATGGCAAGATGGCTGGATGAA
CTAAGGGGGCATGCTGATAAGAATATTGTTATTATGCTCATTGGCAACAA
GTGTGACTTGGGAAGTCTTCGTGCGGTGCCAACGGAAGATGCCCAAGAGT
TTGCCCAAAGAGAAAACCTTTTCTTTATGGAGACATCAGCTCTCGAGGCC
ACCAATGTTGAAACT
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