DN617910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 168.318 bits (425), Expect = 2.314e-41 Identity = 82/158 (51.90%), Postives = 115/158 (72.78%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 N + DY+FK++LIGDS VGKS LL RF+ + + +TIGV+F+ +T+ D KT+K QIWDTAGQER+R +TS+YYRGA G ++VYD+T +SF+++ +WL E+ +A N+ +L+GNK DL RA+P E A+ FA + FMETSA +ATNVE Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVE 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 8.793e-41 Identity = 80/158 (50.63%), Postives = 116/158 (73.42%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 N + DY+FK++LIGDS VGKS LL RFA + ++ +TIGV+F+ +T+ +D KT+K QIWDTAGQER+R +TS+YYRGA G ++VYD+T R+S+ ++ +WL E+ +A +N+ +L+GNK DL + + V A+EFA + F+ETSA ATNVE Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVE 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.148e-40 Identity = 81/158 (51.27%), Postives = 116/158 (73.42%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 N + DY+FK++LIGDS VGKS LL RFA + + +TIGV+F+ +T+ D KT+K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++SF+++ +WL+E+ +A N+ +L+GNK DL + + V TE A+ FA + FMETSA ATNV+ Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQ 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.148e-40 Identity = 77/153 (50.33%), Postives = 110/153 (71.90%), Query Frame = 2 Query: 104 YVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 ++FK ++IGD+ VGKS LL +F F TIGVEF + ++ID+K +K QIWDTAGQE +R++T +YYRG+ GA+LVYD+T+R +F+H+ WL + R +A+ N+ I+LIGNK D+ S RAV E+ ++FA L F+ETSA A+NVE Sbjct: 4 FLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVE 156
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.148e-40 Identity = 82/166 (49.40%), Postives = 121/166 (72.89%), Query Frame = 2 Query: 65 MSNLYGDYNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 MS + DY DY+FK++LIGDS VGKS LL RFA + ++ +TIGV+F+ +T+ +D KT+K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++SF+++ +WL E+ +A +N+ +L+GNK DL + + V A+E+A + + F+ETSA ATNVE Sbjct: 1 MSTMNPDY----DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVE 162
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 1.500e-40 Identity = 80/158 (50.63%), Postives = 115/158 (72.78%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 N + DY+FK++LIGDS VGKS LL RFA + + +TIGV+F+ +T+ D KT+K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++SF+++ +WL+E+ +A +N+ +L+GNKCDL R V E + A + F+ETSA +ATNVE Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVE 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.558e-40 Identity = 80/158 (50.63%), Postives = 116/158 (73.42%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 N + DY+FK++LIGDS VGKS LL RFA + ++ +TIGV+F+ +T+ +D KT+K QIWDTAGQER+R VTS+YYRGA G ++VYD+T ++S+ ++ +WL E+ +A +N+ +L+GNK DL + + V A+EFA + F+ETSA ATNVE Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVE 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB1B_PONAB (Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.558e-40 Identity = 79/158 (50.00%), Postives = 116/158 (73.42%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 N + DY+FK++LIGDS VGKS LL RFA + ++ +TIGV+F+ +T+ +D KT+K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++S+ ++ +WL E+ +A +N+ +L+GNK DL + + V A+EFA + F+ETSA ATNVE Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVE 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB1B_HUMAN (Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.558e-40 Identity = 79/158 (50.00%), Postives = 116/158 (73.42%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 N + DY+FK++LIGDS VGKS LL RFA + ++ +TIGV+F+ +T+ +D KT+K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++S+ ++ +WL E+ +A +N+ +L+GNK DL + + V A+EFA + F+ETSA ATNVE Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVE 159
BLAST of DN617910 vs. ExPASy Swiss-Prot
Match: RAB1B_BOVIN (Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.558e-40 Identity = 79/158 (50.00%), Postives = 116/158 (73.42%), Query Frame = 2 Query: 89 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSVDSKATIGVEFQTKTLSIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLDELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVE 562 N + DY+FK++LIGDS VGKS LL RFA + ++ +TIGV+F+ +T+ +D KT+K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++S+ ++ +WL E+ +A +N+ +L+GNK DL + + V A+EFA + F+ETSA ATNVE Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVE 159 The following BLAST results are available for this feature:
BLAST of DN617910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617910 ID=DN617910; Name=DN617910; organism=Citrus sinensis; type=EST; length=565bpback to top |