DN617897
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617897 vs. ExPASy Swiss-Prot
Match: MPPB_PONAB (Mitochondrial-processing peptidase subunit beta OS=Pongo abelii GN=PMPCB PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.815e-17 Identity = 45/132 (34.09%), Postives = 75/132 (56.82%), Query Frame = 2 Query: 227 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNN 622 +T+++ L +G+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ RS L + E+E +G ++ A SREQ Y A +P VE+L D ++N + E+ + + E+ EV N Sbjct: 57 ETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETN 188
BLAST of DN617897 vs. ExPASy Swiss-Prot
Match: MPPB_HUMAN (Mitochondrial-processing peptidase subunit beta OS=Homo sapiens GN=PMPCB PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.815e-17 Identity = 45/132 (34.09%), Postives = 75/132 (56.82%), Query Frame = 2 Query: 227 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNN 622 +T+++ L +G+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ RS L + E+E +G ++ A SREQ Y A +P VE+L D ++N + E+ + + E+ EV N Sbjct: 57 ETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETN 188
BLAST of DN617897 vs. ExPASy Swiss-Prot
Match: QCR1_BOVIN (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus GN=UQCRC1 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 4.801e-17 Identity = 43/128 (33.59%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 227 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISE 610 +T++S L NG+++ASE S P ++ +++ GS YES + G + +E +AF+ T+NR + +EVE++G ++ A ++RE Y AL +P+ VELL D V+N D ++ ++ + E+ E Sbjct: 47 ETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPGNALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERDVILQELQE 174
BLAST of DN617897 vs. ExPASy Swiss-Prot
Match: QCR2_MOUSE (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus GN=Uqcrc2 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.189e-17 Identity = 42/127 (33.07%), Postives = 76/127 (59.84%), Query Frame = 2 Query: 215 VEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVK 595 ++P + + LPNG+ IAS + +P++ I L+V GS YE + GT+HLL + +T+ S +I R +EA+GG + +A+RE M Y+ + +++ + ++E L++ P F WEV +++K Sbjct: 33 LQPQDLEFTKLPNGLVIASLENYAPLSRIGLFVKAGSRYEDSNNLGTSHLLRLASSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRSDIEILMEFLLNVTTAPEFRRWEVAALRSQLK 159
BLAST of DN617897 vs. ExPASy Swiss-Prot
Match: MPPB_ARATH (Probable mitochondrial-processing peptidase subunit beta OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 8.189e-17 Identity = 44/130 (33.85%), Postives = 80/130 (61.54%), Query Frame = 2 Query: 227 KTKISTLPNGVKIASETSVSP-VASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEV 613 +T+++TLPNG+++A+E+++S A++ +++ GS +ES + GT H LE M F+ T R+ + E+E IGG++ A SREQ Y L + V + +++L D ++N F + +N + + E+ EV Sbjct: 96 ETRVTTLPNGLRVATESNLSAKTATVGVWIDAGSRFESDETNGTAHFLEHMIFKGTDRRTVRALEEEIEDIGGHLNAYTSREQTTYYAKVLDSNVNQALDVLADILQNSKFEEQRINRERDVILREMQEV 225
BLAST of DN617897 vs. ExPASy Swiss-Prot
Match: QCR1_MOUSE (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus GN=Uqcrc1 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.397e-16 Identity = 43/128 (33.59%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 227 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISE 610 +T++S L NG+++ASE S ++ +++ GS YE+ + G + LE +AF+ T+NR + +EVE+IG ++ A ++RE Y AL +P++VELL D V+N D ++ ++ + E+ E Sbjct: 47 ETQVSILDNGLRVASEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQE 174
BLAST of DN617897 vs. ExPASy Swiss-Prot
Match: MPPB_DICDI (Mitochondrial-processing peptidase subunit beta OS=Dictyostelium discoideum GN=mppB PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.824e-16 Identity = 46/126 (36.51%), Postives = 73/126 (57.94%), Query Frame = 2 Query: 227 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNR-SHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSE 601 +TKI+TL NG+++A+E + VAS+ ++V GS+YE+ + G H LE M F+ T R + I E+E +GG++ A SRE Y LK VP V++L D ++N F + ++ + SE Sbjct: 34 ETKITTLSNGIRVATEQTYGEVASVGVWVDSGSVYETDKNNGVAHFLEHMIFKGTAKRPTPQSIETEIENMGGSLNAFTSREHSAYYMKVLKDNVPNAVDILSDILQNSKFETSLIEQERDTILSE 159
BLAST of DN617897 vs. ExPASy Swiss-Prot
Match: QCR2_RAT (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus GN=Uqcrc2 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.112e-16 Identity = 41/127 (32.28%), Postives = 76/127 (59.84%), Query Frame = 2 Query: 215 VEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVK 595 ++P + + + LPNG+ IAS + +P++ I L++ GS YE+ GT+HLL + +T+ S +I R +EA+GG + +A+RE M Y+ + ++ + ++E L++ P F WEV +++K Sbjct: 32 LQPQELEFTKLPNGLVIASLENYAPLSRIGLFIKAGSRYENYNYLGTSHLLRLASTLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRDDIEILMEFLLNVTTAPEFRRWEVAALRSQLK 158
BLAST of DN617897 vs. ExPASy Swiss-Prot
Match: QCR2_BOVIN (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Bos taurus GN=UQCRC2 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 5.308e-16 Identity = 41/117 (35.04%), Postives = 69/117 (58.97%), Query Frame = 2 Query: 221 PGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEV 571 P + + LPNG+ IAS + +P + I L++ GS YE+ + GT+HLL + +T+ S +I R +EA+GG + +++RE M Y+ + L+ V ++E L++ P F WEV Sbjct: 35 PQDLEFTRLPNGLVIASLENYAPASRIGLFIKAGSRYENSNNLGTSHLLRLASSLTTKGASSFKITRGIEAVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTAPEFRRWEV 151
BLAST of DN617897 vs. ExPASy Swiss-Prot
Match: QCR1_HUMAN (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Homo sapiens GN=UQCRC1 PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 5.308e-16 Identity = 42/128 (32.81%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 227 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISE 610 +T++S L NG+++ASE S P ++ +++ GS +E+ + G + LE +AF+ T+NR + +EVE++G ++ A ++RE Y AL +P+ VELL D V+N D ++ ++ + E+ E Sbjct: 47 ETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLGDIVQNCSLEDSQIEKERDVILREMQE 174 The following BLAST results are available for this feature:
BLAST of DN617897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617897 ID=DN617897; Name=DN617897; organism=Citrus sinensis; type=EST; length=622bpback to top |