DN617896
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617896 vs. ExPASy Swiss-Prot
Match: MPPA_MOUSE (Mitochondrial-processing peptidase subunit alpha OS=Mus musculus GN=Pmpca PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.571e-22 Identity = 56/154 (36.36%), Postives = 87/154 (56.49%), Query Frame = -3 Query: 115 GAPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYE 576 G PGKGM+SRLY VLN + + +++ + Y +G+ I + V + +++ +E I + VD V+L+RAK S ++MNLESR V+ ED+GRQVL RK + V +DI VA K+L +A+ GD+ ++P+YE Sbjct: 352 GGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRT--VDLVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVASKMLRGKPAVAALGDLTDLPTYE 503 HSP 2 Score: 22.3274 bits (46), Expect = 3.571e-22 Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = -2 Query: 563 GSFSAGGPWK 592 GSFSAGGP K Sbjct: 347 GSFSAGGPGK 356
BLAST of DN617896 vs. ExPASy Swiss-Prot
Match: MPPA_SCHPO (Probable mitochondrial-processing peptidase subunit alpha OS=Schizosaccharomyces pombe GN=mas2 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.024e-21 Identity = 58/146 (39.73%), Postives = 88/146 (60.27%), Query Frame = -3 Query: 142 GAPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTY-GERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYG 576 G PGKGMYSRLY VLN++P V++ AF++ Y SG+FG+ T D A L REL + T V + +RAK KS++LMNLESRM+ ED+GRQ+ T G + ++ ++ +T D++ VA+++L+ ++ G Sbjct: 322 GGPGKGMYSRLYLNVLNQYPWVETCMAFNHSYTDSGLFGMFVTILDDAAHLAAPLIIRELCN--TVLSVTSEETERAKNQLKSSLLMNLESRMISLEDLGRQIQTQNGLYITPKEMIEKIDALTPSDLSRVARRVLTGNVSNPGNG 465 HSP 2 Score: 22.3274 bits (46), Expect = 1.024e-21 Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = -2 Query: 563 GSFSAGGPWK 592 GSFSAGGP K Sbjct: 317 GSFSAGGPGK 326
BLAST of DN617896 vs. ExPASy Swiss-Prot
Match: MPPA1_DICDI (Mitochondrial-processing peptidase subunit alpha-1 OS=Dictyostelium discoideum GN=mppA1 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.093e-19 Identity = 55/143 (38.46%), Postives = 82/143 (57.34%), Query Frame = -3 Query: 148 GAPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMAS 576 G PGKGM SRL V+ +V++ AF ++N +FGI TT S F+ I+L +EL+ + + + Q +L+RAK+S KS IL NLE R V +D+ R +L++G K E K ++ VT DI + KL S ++ S Sbjct: 486 GGPGKGMQSRLNLNVVYSSHRVKNCHAFLFVFNKVSLFGISLTTQSGFLQDGIELVLQELLMLRS--SMTQQELERAKRSQKSQILQNLEMRSVQCDDMARHILSFGSYKSPEQICKLIDSVTLDDIKKLISKLAQSNPSVVS 626
BLAST of DN617896 vs. ExPASy Swiss-Prot
Match: MPPA2_DICDI (Mitochondrial-processing peptidase subunit alpha-2 OS=Dictyostelium discoideum GN=mppA2 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.027e-14 Identity = 53/154 (34.42%), Postives = 79/154 (51.30%), Query Frame = -3 Query: 115 APGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVA-TPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYE 573 APG G SRL+ N V S AF+ Y SG+FG+ V K + L E+++ + T G+ +L+RAK TKS++L ESR E IG+Q + + F + + VT++DI VA+K+ S T+ GDV + P+ E Sbjct: 289 APGHGRTSRLFSLTKNNSNIVNS-EAFNLTYGDSGLFGVVAEVEGATVGKTVSLITSEIVAASKTAGQ----ELERAKAVTKSSVLEQAESRTSALEFIGKQAIYTDKVLTPAEFAEEISKVTSEDIKRVAKKMTSKKPTLVVVGDVSDAPTIE 437
BLAST of DN617896 vs. ExPASy Swiss-Prot
Match: MPPB_ARATH (Probable mitochondrial-processing peptidase subunit beta OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.478e-12 Identity = 45/155 (29.03%), Postives = 79/155 (50.97%), Query Frame = -3 Query: 109 GKGMYSRLYRRV-LNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQK-LLSSPLTMASYGDVINVPSYE*F 567 GK + S L +RV +NE +S AF+ Y +G+FG+ +D + E+ +A V + RA+ KS++L++++ ++EDIGRQ+LTYG R P ++ V A + VA K + + +++ G + ++P Y F Sbjct: 372 GKHVGSDLTQRVAINEI--AESIMAFNTNYKDTGLFGVYAVAKADCLDDLSYAIMYEVTKLAY--RVSDADVTRARNQLKSSLLLHMDGTSPIAEDIGRQLLTYGRRIPTAELFARIDAVDASTVKRVANKYIYDKDIAISAIGPIQDLPDYNKF 522
BLAST of DN617896 vs. ExPASy Swiss-Prot
Match: MPPB_YEAST (Mitochondrial-processing peptidase subunit beta OS=Saccharomyces cerevisiae GN=MAS1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.740e-11 Identity = 41/133 (30.83%), Postives = 73/133 (54.89%), Query Frame = -3 Query: 121 SFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISV---ATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQ-KLLSSPLTMASYGDVINVPS 507 S+ +FS Y SG++G+ T S+ + L E++ G++ +++RAK K+A+L++L+ + EDIGRQV+T G+R E + V+ +T DI A +L + P++M + G+ VP+ Sbjct: 322 SYMSFSTSYADSGLWGMYIVTDSN--EHNVQLIVNEILKEWKRIKSGKISDAEVNRAKAQLKAALLLSLDGSTAIVEDIGRQVVTTGKRLSPEEVFEQVDKITKDDIIMWANYRLQNKPVSMVALGNTSTVPN 452
BLAST of DN617896 vs. ExPASy Swiss-Prot
Match: MPPB_NEUCR (Mitochondrial-processing peptidase subunit beta OS=Neurospora crassa GN=pep PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11 Identity = 39/132 (29.55%), Postives = 73/132 (55.30%), Query Frame = -3 Query: 118 SFSAFSNIYNHSGMFGIQGTTGS-DFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVA-QKLLSSPLTMASYGDVINVPSY 507 SF +FS Y+ +G++GI T D V + + RE + + V + +++RAK K++IL++L+ V+EDIGRQ++T G R + ++ V+AKD+ A +K+ + +++ G + + Y Sbjct: 335 SFMSFSTSYSDTGLWGIYLVTDKLDRVDDLVHFSLREWTRLCS--NVSEAEVERAKAQLKASILLSLDGTTAVAEDIGRQIVTTGRRMSPAEIERIIDAVSAKDVMDFANKKIWDQDIAISAVGSIEGLFDY 464
BLAST of DN617896 vs. ExPASy Swiss-Prot
Match: QCR2_HUMAN (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Homo sapiens GN=UQCRC2 PE=1 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 7.972e-11 Identity = 44/152 (28.95%), Postives = 69/152 (45.39%), Query Frame = -3 Query: 124 GKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGI----QGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVP 567 G S L++ V Q SAF+ Y+ SG+FGI Q T D + AA + G + + AK K+ LM++ES E++G Q L G P L+ ++ V DI + A+K +S +MA+ G++ + P Sbjct: 302 GSNTTSHLHQAVAKATQQPFDVSAFNASYSDSGLFGIYTISQATAAGDVIK-----AAYNQVKTIAQGNLSNTDVQAAKNKLKAGYLMSVESSECFLEEVGSQALVAGSYMPPSTVLQQIDSVANADIINAAKKFVSGQKSMAASGNLGHTP 448 The following BLAST results are available for this feature:
BLAST of DN617896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617896 ID=DN617896; Name=DN617896; organism=Citrus sinensis; type=EST; length=593bpback to top |