DN617895

Overview
NameDN617895
Unique NameDN617895
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13133 contig Csv1_Contig13133:12..644. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HSP82_TOBAC (Heat shock protein 82 (Fragment) OS=Nicotiana tabacum GN=HSP82 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.633e-44
Identity = 96/129 (74.42%), Postives = 104/129 (80.62%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSI-EEDAGDADADMPPLEDAADDAEGSKMEEVD 631
            TGEYGWTANMERIMKAQALRD+SM+ YMSSKKTMEINP+N IMEELRKRA+ADKNDKSVKD          LTSGFSLDDPNTF  RIHRMLKLGLSI EE+    DADMP LE+  ++   SKMEEVD
Sbjct:  374 TGEYGWTANMERIMKAQALRDSSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFAARIHRMLKLGLSIDEEEEAVEDADMPALEETGEE---SKMEEVD 499          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HS90B_DANRE (Heat shock protein HSP 90-beta OS=Danio rerio GN=hsp90ab1 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 2.793e-36
Identity = 81/137 (59.12%), Postives = 97/137 (70.80%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEED---------AGDADADMPPLEDAADDAEGSKMEEVD 631
            T  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PIME LR++A+ADKNDK+VKD          L+SGFSLDDP T  NRI+RM+KLGL I+ED         +  A  D+PPLE    D + S+MEEVD
Sbjct:  592 TSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIMETLRQKAEADKNDKAVKDLVILLFETALLSSGFSLDDPQTHSNRIYRMIKLGLGIDEDEDVPVEEPSSAAAPEDIPPLE---GDDDASRMEEVD 725          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HSP90_PLAFP (Heat shock 90 kDa protein homolog (Fragment) OS=Plasmodium falciparum (isolate Palo Alto / Uganda) PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 8.126e-36
Identity = 78/128 (60.94%), Postives = 96/128 (75.00%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 631
            T E+GW+ANMERIMKAQALRDNSM  YM SKK MEIN  +PI+  L+++ADADK+DK+VK           LTSGF+L++P TF  RIHRM+KLGLSI+E+  + D D+PPLE+   DA  SKMEEVD
Sbjct:   68 TSEFGWSANMERIMKAQALRDNSMTSYMLSKKIMEINARHPIISALKQKADADKSDKTVKYLIWLLFDTSLLTSGFALEEPTTFSKRIHRMIKLGLSIDEEENN-DIDLPPLEETV-DATDSKMEEVD 193          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HS90A_PIG (Heat shock protein HSP 90-alpha OS=Sus scrofa GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 2.364e-35
Identity = 80/135 (59.26%), Postives = 97/135 (71.85%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 631
            T  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   AD        +MPPLE    D + S+MEEVD
Sbjct:  602 TSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDSSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.364e-35
Identity = 80/135 (59.26%), Postives = 97/135 (71.85%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 631
            T  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   AD        +MPPLE    D + S+MEEVD
Sbjct:  602 TSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HS90A_MACFA (Heat shock protein HSP 90-alpha OS=Macaca fascicularis GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 2.364e-35
Identity = 80/135 (59.26%), Postives = 97/135 (71.85%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 631
            T  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   AD        +MPPLE    D + S+MEEVD
Sbjct:  602 TSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HS90A_HUMAN (Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5)

HSP 1 Score: 148.673 bits (374), Expect = 2.364e-35
Identity = 80/135 (59.26%), Postives = 97/135 (71.85%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 631
            T  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   AD        +MPPLE    D + S+MEEVD
Sbjct:  601 TSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLE---GDDDTSRMEEVD 732          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HS90A_BOVIN (Heat shock protein HSP 90-alpha OS=Bos taurus GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 2.364e-35
Identity = 80/135 (59.26%), Postives = 97/135 (71.85%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 631
            T  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   AD        +MPPLE    D + S+MEEVD
Sbjct:  602 TSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDSSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HS90B_RAT (Heat shock protein HSP 90-beta OS=Rattus norvegicus GN=Hsp90ab1 PE=1 SV=4)

HSP 1 Score: 147.902 bits (372), Expect = 4.033e-35
Identity = 78/135 (57.78%), Postives = 97/135 (71.85%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 631
            T  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  593 TSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HS90B_MOUSE (Heat shock protein HSP 90-beta OS=Mus musculus GN=Hsp90ab1 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 4.033e-35
Identity = 78/135 (57.78%), Postives = 97/135 (71.85%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 631
            T  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  593 TSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
The following BLAST results are available for this feature:
BLAST of DN617895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
HSP82_TOBAC1.633e-4474.42Heat shock protein 82 (Fragment) OS=Nicotiana taba... [more]
HS90B_DANRE2.793e-3659.12Heat shock protein HSP 90-beta OS=Danio rerio GN=h... [more]
HSP90_PLAFP8.126e-3660.94Heat shock 90 kDa protein homolog (Fragment) OS=Pl... [more]
HS90A_PIG2.364e-3559.26Heat shock protein HSP 90-alpha OS=Sus scrofa GN=H... [more]
HS90A_PANTR2.364e-3559.26Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]
HS90A_MACFA2.364e-3559.26Heat shock protein HSP 90-alpha OS=Macaca fascicul... [more]
HS90A_HUMAN2.364e-3559.26Heat shock protein HSP 90-alpha OS=Homo sapiens GN... [more]
HS90A_BOVIN2.364e-3559.26Heat shock protein HSP 90-alpha OS=Bos taurus GN=H... [more]
HS90B_RAT4.033e-3557.78Heat shock protein HSP 90-beta OS=Rattus norvegicu... [more]
HS90B_MOUSE4.033e-3557.78Heat shock protein HSP 90-beta OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01N08_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001N08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617895 ID=DN617895; Name=DN617895; organism=Citrus sinensis; type=EST; length=633bp
TTTTTACCAAGAATATAAACTGGGCCGCATTAAGATAACTATATCAAATA
AGATAGATTCGGAAACAGCATACTTTTTAAGCATTTGCAAAACAATAAAA
CAAAACCTCCACCAAAGAGGGAAAATAAAAATATAAAAGCACTAATCCCA
CAGTACTACCACCACAGAACGCATAACAAAAAGAAACTACCTAGTTAAAA
GAGTTTCATGAAAAAAGACTAGTATATCAGACTATTATAGCTTCTTAATC
AACTTCCTCCATCTTGCTGCCCTCAGCATCGTCAGCAGCATCCTCCAATG
GTGGCATGTCAGCATCAGCATCACCAGCATCCTCCTCGATGCTCAGCCCG
AGTTTCAACATCCTGTGGATTCTGTTGCCGAAAGTGTTAGGGTCATCAAG
GCTGAAACCAGAAGTGAGGAGAGCAGTCTCAAAGAGCAGAAGGACAAGGT
CCTTCACAGACTTGTCATTCTTGTCCGCATCAGCCCTCTTCCTGAGCTCC
TCCATGATGGGGTTCTCCGGATTGATCTCCATGGTCTTCTTGCTGGACAT
GTAACCAGCCATGCTGTTGTCTCTCAAGGCCTGAGCCTTCATGATCCTCT
CCATGTTGGCTGTCCATCCATACTCACCAGTCA
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