DN617895

Overview
NameDN617895
Unique NameDN617895
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HS90A_CRIGR (Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.001e-34
Identity = 78/135 (57.78%), Postives = 96/135 (71.11%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 631
            T  YGWTANMERI+KAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED    D        +MPPLE    D + S+MEEVD
Sbjct:  602 TSTYGWTANMERIIKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTVDDTSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: H90A1_DANRE (Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=2 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 2.614e-34
Identity = 77/135 (57.04%), Postives = 97/135 (71.85%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEED-------AGDADADMPPLEDAADDAEGSKMEEVD 631
            T  YGWTANMERIMK+QALRDNS  GYM++KK +EINP +PI+E LR++A+ADKNDK+VKD          L+SGF+LDDP T  NRI+RM+KLGL I++D       +  A+ DMP LE    D + S+MEEVD
Sbjct:  594 TSTYGWTANMERIMKSQALRDNSTMGYMTAKKHLEINPAHPIVETLREKAEADKNDKAVKDLVILLFETALLSSGFTLDDPQTHANRIYRMIKLGLGIDDDDSVVEEISQPAEEDMPVLE---GDDDTSRMEEVD 725          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 7.605e-34
Identity = 76/129 (58.91%), Postives = 95/129 (73.64%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSI-EEDAGDADADMPPLEDAADDAEGSKMEEVD 631
            T E+GW+ANMERIMKAQALRD+S+  YM SKK MEINP + IM+EL+ RA  DK DK+VKD          LTSGF+LD+P  FGNRI+RM+KLGLS+ +E+  + D+ MPPL++   D   SKMEEVD
Sbjct:  596 TSEFGWSANMERIMKAQALRDSSITSYMLSKKIMEINPRHSIMKELKTRAANDKTDKTVKDLVWLLYDTALLTSGFNLDEPTQFGNRIYRMIKLGLSLDDEEHVEEDSSMPPLDEPVVD---SKMEEVD 721          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 9.933e-34
Identity = 76/129 (58.91%), Postives = 95/129 (73.64%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSI-EEDAGDADADMPPLEDAADDAEGSKMEEVD 631
            T E+GW+ANMERIMKAQALRD+S+  YM SKK MEINP + IM+EL+ RA  DK DK+VKD          LTSGF+LD+P  FGNRI+RM+KLGLS+ +E+  + D+ MPPL++   D   SKMEEVD
Sbjct:  597 TSEFGWSANMERIMKAQALRDSSITSYMLSKKIMEINPRHSIMKELKARAANDKTDKTVKDLVWLLYDTALLTSGFNLDEPTQFGNRIYRMIKLGLSLDDEEHVEDDSSMPPLDEPVVD---SKMEEVD 722          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HS90A_HORSE (Heat shock protein HSP 90-alpha (Fragment) OS=Equus caballus GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.297e-33
Identity = 77/132 (58.33%), Postives = 94/132 (71.21%), Query Frame = -3
Query:  257 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKME 631
            T  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   AD        +MPPLE    D + S+ME
Sbjct:  591 TSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDSSAAVTEEMPPLE---GDDDTSRME 719          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 141.739 bits (356), Expect = 2.890e-33
Identity = 77/142 (54.23%), Postives = 96/142 (67.61%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEED--------------AGDADADMPPLEDAADDAEGSKMEEVD 631
            T +YGW+ANMERIMKAQALRD+S  GYM+ KK +EINP++ I+E LR+RA+ADKNDK+VKD          L+SGFSLD+P T  +RI+RM+KLGL I+ED              A  A  D PPL D ++D   S MEEVD
Sbjct:  581 TSQYGWSANMERIMKAQALRDSSAMGYMAGKKHLEINPDHAIIETLRQRAEADKNDKAVKDLVILLFETALLSSGFSLDEPGTHASRIYRMIKLGLGIDEDEPMTTEESSSGAAAAAPASGDAPPLVDDSEDL--SHMEEVD 720          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.890e-33
Identity = 75/135 (55.56%), Postives = 94/135 (69.63%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 631
            T  YGWTANME+IMKAQALRDNS  GYM +KK +EINP++PIME LR++A+ADKNDK+VKD          L+SGFSL+DP T  N I+ M+KLGL  +ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  466 TSTYGWTANMEQIMKAQALRDNSTMGYMMAKKHLEINPDHPIMETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNHIYHMIKLGLGTDEDEVAAEEPSDAVPDEIPPLE---GDEDASRMEEVD 597          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HSP85_TRYCR (Heat shock-like 85 kDa protein OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.195e-32
Identity = 70/129 (54.26%), Postives = 95/129 (73.64%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSI-EEDAGDADADMPPLEDAADDAEGSKMEEVD 631
            T E+GW+A+ME+IM+ QALRD+SM+ YM SKKTMEINP +PI++EL++R +AD+NDK+VKD          LTSGF+LDDP ++  RIHRM+KLGLS+ +ED G+ +A+      A   A  S ME+VD
Sbjct:  576 TSEFGWSAHMEQIMRNQALRDSSMSAYMMSKKTMEINPAHPIVKELKRRVEADENDKAVKDLVYLLFDTALLTSGFTLDDPTSYAERIHRMIKLGLSLDDEDNGNEEAEPAAAVPAEPVAGTSSMEQVD 704          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HSP83_DROME (Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.297e-32
Identity = 74/134 (55.22%), Postives = 94/134 (70.15%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEED----AGDADA--DMPPLEDAADDAEGSKMEEVD 631
            T ++GW+ANMERIMKAQALRD +  GYM+ KK +EINP++PI+E LR++ADADKNDK+VKD          L+SGFSLD P    +RI+RM+KLGL I+ED      DA +  D P L +  +DA  S MEEVD
Sbjct:  586 TSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVETLRQKADADKNDKAVKDLVILLFETSLLSSGFSLDSPQVHASRIYRMIKLGLGIDEDEPMTTDDAQSAGDAPSLVEDTEDA--SHMEEVD 717          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HSP90_BRUPA (Heat shock protein 90 OS=Brugia pahangi GN=HSP90 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.214e-31
Identity = 73/137 (53.28%), Postives = 96/137 (70.07%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEED---------AGDADADMPPLEDAADDAEGSKMEEVD 631
            T EYGW+ANMERIMKAQALRD+S  GYM++KK +EINP++ +++ LR+R +ADKNDK+VKD          L+SGFSL+DP    +RI+RM+KLGL I ED         +G+ D  +P L  A +DA  S+MEEVD
Sbjct:  583 TSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHSVIKALRERVEADKNDKTVKDLVVLLFETALLSSGFSLEDPQLHASRIYRMIKLGLDITEDEEEEAIASVSGEKDECVPNLVGAEEDA--SRMEEVD 717          
The following BLAST results are available for this feature:
BLAST of DN617895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
HS90A_CRIGR2.001e-3457.78Heat shock protein HSP 90-alpha OS=Cricetulus gris... [more]
H90A1_DANRE2.614e-3457.04Heat shock protein HSP 90-alpha 1 OS=Danio rerio G... [more]
HSP90_THEPA7.605e-3458.91Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]
HSP90_THEAN9.933e-3458.91Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HS90A_HORSE1.297e-3358.33Heat shock protein HSP 90-alpha (Fragment) OS=Equu... [more]
HSP83_ANOGA2.890e-3354.23Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8... [more]
H90B3_HUMAN2.890e-3355.56Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]
HSP85_TRYCR3.195e-3254.26Heat shock-like 85 kDa protein OS=Trypanosoma cruz... [more]
HSP83_DROME9.297e-3255.22Heat shock protein 83 OS=Drosophila melanogaster G... [more]
HSP90_BRUPA1.214e-3153.28Heat shock protein 90 OS=Brugia pahangi GN=HSP90 P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01N08_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001N08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617895 ID=DN617895; Name=DN617895; organism=Citrus sinensis; type=EST; length=633bp
TTTTTACCAAGAATATAAACTGGGCCGCATTAAGATAACTATATCAAATA
AGATAGATTCGGAAACAGCATACTTTTTAAGCATTTGCAAAACAATAAAA
CAAAACCTCCACCAAAGAGGGAAAATAAAAATATAAAAGCACTAATCCCA
CAGTACTACCACCACAGAACGCATAACAAAAAGAAACTACCTAGTTAAAA
GAGTTTCATGAAAAAAGACTAGTATATCAGACTATTATAGCTTCTTAATC
AACTTCCTCCATCTTGCTGCCCTCAGCATCGTCAGCAGCATCCTCCAATG
GTGGCATGTCAGCATCAGCATCACCAGCATCCTCCTCGATGCTCAGCCCG
AGTTTCAACATCCTGTGGATTCTGTTGCCGAAAGTGTTAGGGTCATCAAG
GCTGAAACCAGAAGTGAGGAGAGCAGTCTCAAAGAGCAGAAGGACAAGGT
CCTTCACAGACTTGTCATTCTTGTCCGCATCAGCCCTCTTCCTGAGCTCC
TCCATGATGGGGTTCTCCGGATTGATCTCCATGGTCTTCTTGCTGGACAT
GTAACCAGCCATGCTGTTGTCTCTCAAGGCCTGAGCCTTCATGATCCTCT
CCATGTTGGCTGTCCATCCATACTCACCAGTCA
back to top