DN617895

Overview
NameDN617895
Unique NameDN617895
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HSP83_DROAV (Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.214e-31
Identity = 72/134 (53.73%), Postives = 92/134 (68.66%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDA------GDADADMPPLEDAADDAEGSKMEEVD 631
            T ++GW+ANMERIMKAQALRD +  GYM+ KK +EINP++PI+E LR++ADADKNDK+VKD          L+SGFSLD P    +RI+RM+KLGL I+ED         +  D P L +  +DA  S MEEVD
Sbjct:  585 TSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVETLRQKADADKNDKAVKDLVILLFETSLLSSGFSLDSPQVHASRIYRMIKLGLGIDEDEPMTTEDAQSAGDAPSLVEDTEDA--SHMEEVD 716          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HSP83_DROPS (Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura GN=Hsp83 PE=3 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.586e-31
Identity = 72/134 (53.73%), Postives = 92/134 (68.66%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDA------GDADADMPPLEDAADDAEGSKMEEVD 631
            T ++GW+ANMERIMKAQALRD +  GYM+ KK +EINP++PI+E LR++ADADKNDK+VKD          L+SGFSLD P    +RI+RM+KLGL I+ED         +  D P L +  +DA  S MEEVD
Sbjct:  586 TSQFGWSANMERIMKAQALRDTATMGYMAGKKQLEINPDHPIVEALRQKADADKNDKAVKDLVILLFETSLLSSGFSLDSPQVHASRIYRMIKLGLGIDEDEPMTTEDAHSGGDAPGLVEDTEDA--SHMEEVD 717          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HSP83_TRYBB (Heat shock protein 83 OS=Trypanosoma brucei brucei GN=HSP83 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.533e-31
Identity = 66/128 (51.56%), Postives = 90/128 (70.31%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 631
            T E+GW+A+ME+IM+ QALRD+SM+ YM  KKTMEIN  + I++EL++R +AD+NDK+ KD          LTSGF+LDDP  + +RIHRM+KLGLS+++DA + +A  P    A      S MEEVD
Sbjct:  576 TSEFGWSAHMEQIMRNQALRDSSMSAYMMRKKTMEINTTHAIVKELKRRVEADENDKAAKDLIFLLFDTSLLTSGFTLDDPTAYADRIHRMIKLGLSLDDDAEEEEAQAPVAAAANSSTGASGMEEVD 703          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 4.614e-31
Identity = 74/137 (54.01%), Postives = 100/137 (72.99%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAG---------DADADMPPLEDAADDAEGSKMEEVD 631
            T EYGW+ANMERIMKAQALRD+SM+ YMSSKKT+E+NP++PI+ +L K+A A+K+ K+ KD          LTSGFSLD+P++F +RIHRM+KLGLSI++D+              D+PPLE   ++ E S+ME+VD
Sbjct:  569 TSEYGWSANMERIMKAQALRDSSMSSYMSSKKTLELNPDHPIVRDLAKKA-AEKS-KTFKDFVYLLYETALLTSGFSLDEPSSFASRIHRMIKLGLSIQDDSSATTEESTNTTTSDDIPPLE---ENDEPSEMEKVD 700          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.342e-30
Identity = 70/130 (53.85%), Postives = 92/130 (70.77%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSI--EEDAGDADADMPPLEDAADDAEGSKMEEVD 631
            T E+GW+A+ME+IM+ QALRD+SMA YM SKKTME+NP +PI++ELR+R DAD+NDK+VKD          LTSGF L+DP  +  RI+RM+KLGLS+  EE+   A+A +     A   A  S ME+VD
Sbjct:  572 TSEFGWSAHMEQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVDADENDKAVKDLVFLLFDTSLLTSGFQLEDPTGYAERINRMIKLGLSLDEEEEVVAAEATVAETAPAEVTAGTSSMEQVD 701          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HSP90_CAEBR (Heat shock protein 90 OS=Caenorhabditis briggsae GN=daf-21 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.702e-30
Identity = 69/134 (51.49%), Postives = 93/134 (69.40%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAAD------DAEGSKMEEVD 631
            T EYGW+ANMERIMKAQALRD+S  GYM++KK +EINP++ IM+ LR+R +ADKNDK+VKD          L+SGFSL++P +  +RI+RM+KLGL I ++  D +    P    A+      D + S+MEEVD
Sbjct:  575 TSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHAIMKTLRERVEADKNDKTVKDLVVLLFETALLSSGFSLEEPQSHASRIYRMIKLGLDIGDE--DIEESAVPSSCTAEAKIEGADEDASRMEEVD 706          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe GN=swo1 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.136e-29
Identity = 67/129 (51.94%), Postives = 92/129 (71.32%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD-KNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 631
            TG+YGW+ANMERIMKAQALRD SM+ YMSS+KT EINP++PI+ EL+K+ + +   D+SVKD          L+SGF+LDDP+ +  RI+R++ LGLSI+E+      ++     AA++   SKMEEVD
Sbjct:  576 TGQYGWSANMERIMKAQALRDTSMSAYMSSRKTFEINPKSPIIAELKKKVEENGAEDRSVKDLATILYETALLSSGFTLDDPSAYAQRINRLISLGLSIDEEEEAPIEEISTESVAAENNAESKMEEVD 704          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.136e-29
Identity = 72/134 (53.73%), Postives = 95/134 (70.90%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD-ADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEED-----AGDADADMPPLEDAADDAEGSKMEEVD 631
            TG++GW+ANMERIMKAQALRD+SM+ YMSSKKT EI+P++PI++EL+KR D     DK+VKD          LTSGFSLD+P +F +RI+R++ LGL+I+ED     A +A    P  E  AD    ++MEEVD
Sbjct:  580 TGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVKDLTKLLYETALLTSGFSLDEPTSFASRINRLISLGLNIDEDEETETAPEASTAAPVEEVPAD----TEMEEVD 709          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 129.798 bits (325), Expect = 1.136e-29
Identity = 71/134 (52.99%), Postives = 96/134 (71.64%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD-ADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEED-----AGDADADMPPLEDAADDAEGSKMEEVD 631
            TG++GW+ANMERIMKAQALRD+SM+ YMSSKKT EI+P++PI++EL+KR D     DK+VKD          LTSGFSL++P +F +RI+R++ LGL+I+ED     A +A  + P  E  AD    ++MEEVD
Sbjct:  576 TGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVKDLTNLLFETALLTSGFSLEEPTSFASRINRLISLGLNIDEDEETETAPEASTEAPVEEVPAD----TEMEEVD 705          
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HSP83_LEIDO (Heat shock protein 83 (Fragment) OS=Leishmania donovani GN=HSP83 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.939e-29
Identity = 64/128 (50.00%), Postives = 90/128 (70.31%), Query Frame = -3
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 631
            T E+GW+A+ME+IM+ QA+RD+SM+ YM SKKTME+NP +PI++ LR+R +AD+NDK+VKD          LTSGF L+DP  +  RI+RM+KLGLS++E+   A+A +     A      S ME+VD
Sbjct:  325 TSEFGWSAHMEQIMRNQAVRDSSMSAYMMSKKTMELNPRHPIIKVLRRRVEADENDKAVKDLVFLLFDTSLLTSGFQLEDPTGYAKRINRMIKLGLSLDEEEEAAEATVVETAPAEVTVGTSSMEQVD 452          
The following BLAST results are available for this feature:
BLAST of DN617895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
HSP83_DROAV1.214e-3153.73Heat shock protein 83 OS=Drosophila auraria GN=Hsp... [more]
HSP83_DROPS1.586e-3153.73Heat shock protein 83 OS=Drosophila pseudoobscura ... [more]
HSP83_TRYBB3.533e-3151.56Heat shock protein 83 OS=Trypanosoma brucei brucei... [more]
HSC90_DICDI4.614e-3154.01Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
HSP83_LEIIN1.342e-3053.85Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]
HSP90_CAEBR8.702e-3051.49Heat shock protein 90 OS=Caenorhabditis briggsae G... [more]
HSP90_SCHPO1.136e-2951.94Heat shock protein 90 homolog OS=Schizosaccharomyc... [more]
HSP82_YEAST1.136e-2953.73ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HSC82_YEAST1.136e-2952.99ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
HSP83_LEIDO1.939e-2950.00Heat shock protein 83 (Fragment) OS=Leishmania don... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01N08_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001N08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617895 ID=DN617895; Name=DN617895; organism=Citrus sinensis; type=EST; length=633bp
TTTTTACCAAGAATATAAACTGGGCCGCATTAAGATAACTATATCAAATA
AGATAGATTCGGAAACAGCATACTTTTTAAGCATTTGCAAAACAATAAAA
CAAAACCTCCACCAAAGAGGGAAAATAAAAATATAAAAGCACTAATCCCA
CAGTACTACCACCACAGAACGCATAACAAAAAGAAACTACCTAGTTAAAA
GAGTTTCATGAAAAAAGACTAGTATATCAGACTATTATAGCTTCTTAATC
AACTTCCTCCATCTTGCTGCCCTCAGCATCGTCAGCAGCATCCTCCAATG
GTGGCATGTCAGCATCAGCATCACCAGCATCCTCCTCGATGCTCAGCCCG
AGTTTCAACATCCTGTGGATTCTGTTGCCGAAAGTGTTAGGGTCATCAAG
GCTGAAACCAGAAGTGAGGAGAGCAGTCTCAAAGAGCAGAAGGACAAGGT
CCTTCACAGACTTGTCATTCTTGTCCGCATCAGCCCTCTTCCTGAGCTCC
TCCATGATGGGGTTCTCCGGATTGATCTCCATGGTCTTCTTGCTGGACAT
GTAACCAGCCATGCTGTTGTCTCTCAAGGCCTGAGCCTTCATGATCCTCT
CCATGTTGGCTGTCCATCCATACTCACCAGTCA
back to top