DN617895

Overview
NameDN617895
Unique NameDN617895
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: HSP82_AJECA (Heat shock protein 82 OS=Ajellomyces capsulata GN=HSP82 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.448e-17
Identity = 54/131 (41.22%), Postives = 74/131 (56.49%), Query Frame = -3 
Query:  248 TGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDA---GDADADMPPLEDAADDAEGSKMEEVD 631
            TG++GW+ANMERIMKAQALRD SM+   SS+ T                   + ND++VK           L SGF++++P+ F  RIH+++ LGL+I+EDA    + +AD    E  AD    S MEEVD
Sbjct:  572 TGQFGWSANMERIMKAQALRDTSMSSRRSSRPT-------------------EGNDRTVKSITQLLFETSLLVSGFTIEEPSGFAGRIHKLVSLGLNIDEDAETSEEKEADTVVAEAPAD----SDMEEVD 679
[Close]
BLAST of DN617895 vs. ExPASy Swiss-Prot
Match: ENPL_RABIT (Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.103e-16
Identity = 48/127 (37.80%), Postives = 74/127 (58.27%), Query Frame = -3 
Query:  248 EYGWTANMERIMKAQALRDNS-MAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 625
            +YGW+ANMERIMKAQA +       Y +S+KT EINP +P++ ++ +     ++DK+V D          L SG+ L D   +G+RI R+++L L+I+ DA   +      ED  +D E  + EE+D
Sbjct:  570 QYGWSANMERIMKAQAYQTGKDSTKYYASQKTFEINPRHPLIRDMLR---IKEDDKTVMDLAVVLFETAILRSGYLLPDTKAYGDRIERIVRLSLNIDPDAKVEEEPEEEPEDTTEDTEQDEEEEMD 693
The following BLAST results are available for this feature:
BLAST of DN617895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
HSP82_AJECA8.448e-1741.22Heat shock protein 82 OS=Ajellomyces capsulata GN=... [more]
ENPL_RABIT1.103e-1637.80Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01N08_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001N08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617895 ID=DN617895; Name=DN617895; organism=Citrus sinensis; type=EST; length=633bp
TTTTTACCAAGAATATAAACTGGGCCGCATTAAGATAACTATATCAAATA
AGATAGATTCGGAAACAGCATACTTTTTAAGCATTTGCAAAACAATAAAA
CAAAACCTCCACCAAAGAGGGAAAATAAAAATATAAAAGCACTAATCCCA
CAGTACTACCACCACAGAACGCATAACAAAAAGAAACTACCTAGTTAAAA
GAGTTTCATGAAAAAAGACTAGTATATCAGACTATTATAGCTTCTTAATC
AACTTCCTCCATCTTGCTGCCCTCAGCATCGTCAGCAGCATCCTCCAATG
GTGGCATGTCAGCATCAGCATCACCAGCATCCTCCTCGATGCTCAGCCCG
AGTTTCAACATCCTGTGGATTCTGTTGCCGAAAGTGTTAGGGTCATCAAG
GCTGAAACCAGAAGTGAGGAGAGCAGTCTCAAAGAGCAGAAGGACAAGGT
CCTTCACAGACTTGTCATTCTTGTCCGCATCAGCCCTCTTCCTGAGCTCC
TCCATGATGGGGTTCTCCGGATTGATCTCCATGGTCTTCTTGCTGGACAT
GTAACCAGCCATGCTGTTGTCTCTCAAGGCCTGAGCCTTCATGATCCTCT
CCATGTTGGCTGTCCATCCATACTCACCAGTCA
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