DN617894

Overview
NameDN617894
Unique NameDN617894
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length316
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11542 contig Csv1_Contig11542:156..471. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP90_EIMTE (Heat shock protein 90 OS=Eimeria tenella GN=HSP90 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 4.908e-39
Identity = 79/101 (78.22%), Postives = 91/101 (90.10%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            ++SLIINTFYSNKEIFLRELISN+SDALDKIR+E++T+  KL  +PELFI +IPDK NNTL+I +SGIGMTKADLVNNLGTIARSGTK FMEAL AG D+S
Sbjct:   16 LMSLIINTFYSNKEIFLRELISNASDALDKIRYEAITEPEKLKTKPELFIRLIPDKANNTLTIENSGIGMTKADLVNNLGTIARSGTKAFMEALQAGGDIS 116
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HS90A_CRIGR (Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 4.908e-39
Identity = 80/101 (79.21%), Postives = 93/101 (92.08%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            ++SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+  EL I+IIP+K + TL+I+D+GIGMTKADL+NNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   29 LMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINIIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS 129
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP83_DROVI (Heat shock protein 83 (Fragment) OS=Drosophila virilis GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.410e-39
Identity = 80/101 (79.21%), Postives = 93/101 (92.08%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            ++SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+  EL+I +IP+KT  TL+IID+GIGMTK+DLVNNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   17 LMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADIS 117
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP83_DROSI (Heat shock protein 83 (Fragment) OS=Drosophila simulans GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.410e-39
Identity = 80/101 (79.21%), Postives = 93/101 (92.08%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            ++SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+  EL+I +IP+KT  TL+IID+GIGMTK+DLVNNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   17 LMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADIS 117
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP83_DROPS (Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura GN=Hsp83 PE=3 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 6.410e-39
Identity = 80/101 (79.21%), Postives = 93/101 (92.08%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            ++SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+  EL+I +IP+KT  TL+IID+GIGMTK+DLVNNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   17 LMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADIS 117
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP83_DROPE (Heat shock protein 83 (Fragment) OS=Drosophila persimilis GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.410e-39
Identity = 80/101 (79.21%), Postives = 93/101 (92.08%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            ++SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+  EL+I +IP+KT  TL+IID+GIGMTK+DLVNNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   17 LMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADIS 117
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP83_DROMI (Heat shock protein 83 (Fragment) OS=Drosophila miranda GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.410e-39
Identity = 80/101 (79.21%), Postives = 93/101 (92.08%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            ++SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+  EL+I +IP+KT  TL+IID+GIGMTK+DLVNNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   17 LMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADIS 117
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP83_DROME (Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.410e-39
Identity = 80/101 (79.21%), Postives = 93/101 (92.08%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            ++SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+  EL+I +IP+KT  TL+IID+GIGMTK+DLVNNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   17 LMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADIS 117
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP83_DROAV (Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.410e-39
Identity = 80/101 (79.21%), Postives = 93/101 (92.08%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            ++SLIINTFYSNKEIFLRELISN+SDALDKIR+ESLTD SKLD+  EL+I +IP+KT  TL+IID+GIGMTK+DLVNNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   17 LMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADIS 117
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 8.371e-39
Identity = 81/101 (80.20%), Postives = 92/101 (91.09%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            ++SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKL++  ELFI IIP+K   TL++ID+GIGMTKADLVNNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   19 LMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLESGKELFIKIIPNKEAGTLTLIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADIS 119
The following BLAST results are available for this feature:
BLAST of DN617894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HSP90_EIMTE4.908e-3978.22Heat shock protein 90 OS=Eimeria tenella GN=HSP90 ... [more]
HS90A_CRIGR4.908e-3979.21Heat shock protein HSP 90-alpha OS=Cricetulus gris... [more]
HSP83_DROVI6.410e-3979.21Heat shock protein 83 (Fragment) OS=Drosophila vir... [more]
HSP83_DROSI6.410e-3979.21Heat shock protein 83 (Fragment) OS=Drosophila sim... [more]
HSP83_DROPS6.410e-3979.21Heat shock protein 83 OS=Drosophila pseudoobscura ... [more]
HSP83_DROPE6.410e-3979.21Heat shock protein 83 (Fragment) OS=Drosophila per... [more]
HSP83_DROMI6.410e-3979.21Heat shock protein 83 (Fragment) OS=Drosophila mir... [more]
HSP83_DROME6.410e-3979.21Heat shock protein 83 OS=Drosophila melanogaster G... [more]
HSP83_DROAV6.410e-3979.21Heat shock protein 83 OS=Drosophila auraria GN=Hsp... [more]
HSP83_ANOGA8.371e-3980.20Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01N08_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001N08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617894 ID=DN617894; Name=DN617894; organism=Citrus sinensis; type=EST; length=316bp
GAGATCAACCAGTGTGTTGAGTTTGATCATCAACACCTTTTACAGCAACA
AGGAGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGAT
AAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACC
AGAGCTTTTCATCCACATTATCCCTGATAAGACCAACAACACTTTGTCTA
TTATTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCTT
GGTACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGC
TGGGGCGGATGTGAGC
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