DN617894

Overview
NameDN617894
Unique NameDN617894
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length316
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_SHIBS (Chaperone protein htpG OS=Shigella boydii serotype 4 (strain Sb227) GN=htpG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.196e-22
Identity = 49/96 (51.04%), Postives = 74/96 (77.08%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 301
            +L L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   TL+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:   16 LLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_MARMS (Chaperone protein htpG OS=Marinomonas sp. (strain MWYL1) GN=htpG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.196e-22
Identity = 51/95 (53.68%), Postives = 71/95 (74.74%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 298
            +L L+I++ YSNKEIFLRELISN+SDA+DK+RFES+ +   L   P L + I  DK  NT+ I D+G+GM++ + + NLGTIA+SGT  F+E L+
Sbjct:   19 LLHLMIHSLYSNKEIFLRELISNASDAVDKLRFESVANADLLAEDPNLRVRIEFDKDTNTVVIDDNGVGMSREEAITNLGTIAKSGTSAFLEQLS 113          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_KLEP7 (Chaperone protein htpG OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=htpG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.196e-22
Identity = 49/96 (51.04%), Postives = 73/96 (76.04%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 301
            +L L+I++ YSNKEIFLRELISN+SDA DK+RF +L+     +   EL + +  DK N TL+I D+GIGM + +++++LGTIA+SGTK F+E++ +
Sbjct:   16 LLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSQPDLYEGDGELRVRVSFDKDNRTLTIADNGIGMNREEVIDHLGTIAKSGTKAFLESMGS 111          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_ECOUT (Chaperone protein htpG OS=Escherichia coli (strain UTI89 / UPEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.196e-22
Identity = 49/96 (51.04%), Postives = 74/96 (77.08%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 301
            +L L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   TL+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:   16 LLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_ECOLI (Chaperone protein htpG OS=Escherichia coli (strain K12) GN=htpG PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.196e-22
Identity = 49/96 (51.04%), Postives = 74/96 (77.08%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 301
            +L L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   TL+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:   16 LLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_ECOLC (Chaperone protein htpG OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=htpG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.196e-22
Identity = 49/96 (51.04%), Postives = 74/96 (77.08%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 301
            +L L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   TL+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:   16 LLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_ECOL6 (Chaperone protein htpG OS=Escherichia coli O6 GN=htpG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.196e-22
Identity = 49/96 (51.04%), Postives = 74/96 (77.08%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 301
            +L L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   TL+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:   16 LLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_ECOL5 (Chaperone protein htpG OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=htpG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.196e-22
Identity = 49/96 (51.04%), Postives = 74/96 (77.08%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 301
            +L L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   TL+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:   16 LLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_ECOK1 (Chaperone protein htpG OS=Escherichia coli O1:K1 / APEC GN=htpG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.196e-22
Identity = 49/96 (51.04%), Postives = 74/96 (77.08%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 301
            +L L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   TL+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:   16 LLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_ECOHS (Chaperone protein htpG OS=Escherichia coli O9:H4 (strain HS) GN=htpG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.196e-22
Identity = 49/96 (51.04%), Postives = 74/96 (77.08%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 301
            +L L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   TL+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:   16 LLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111          
The following BLAST results are available for this feature:
BLAST of DN617894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_SHIBS3.196e-2251.04Chaperone protein htpG OS=Shigella boydii serotype... [more]
HTPG_MARMS3.196e-2253.68Chaperone protein htpG OS=Marinomonas sp. (strain ... [more]
HTPG_KLEP73.196e-2251.04Chaperone protein htpG OS=Klebsiella pneumoniae su... [more]
HTPG_ECOUT3.196e-2251.04Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOLI3.196e-2251.04Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOLC3.196e-2251.04Chaperone protein htpG OS=Escherichia coli (strain... [more]
HTPG_ECOL63.196e-2251.04Chaperone protein htpG OS=Escherichia coli O6 GN=h... [more]
HTPG_ECOL53.196e-2251.04Chaperone protein htpG OS=Escherichia coli O6:K15:... [more]
HTPG_ECOK13.196e-2251.04Chaperone protein htpG OS=Escherichia coli O1:K1 /... [more]
HTPG_ECOHS3.196e-2251.04Chaperone protein htpG OS=Escherichia coli O9:H4 (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01N08_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001N08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617894 ID=DN617894; Name=DN617894; organism=Citrus sinensis; type=EST; length=316bp
GAGATCAACCAGTGTGTTGAGTTTGATCATCAACACCTTTTACAGCAACA
AGGAGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGAT
AAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACC
AGAGCTTTTCATCCACATTATCCCTGATAAGACCAACAACACTTTGTCTA
TTATTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCTT
GGTACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGC
TGGGGCGGATGTGAGC
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