DN617894

Overview
NameDN617894
Unique NameDN617894
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length316
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11542 contig Csv1_Contig11542:156..471. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 5.615e-35
Identity = 71/103 (68.93%), Postives = 89/103 (86.41%), Query Frame = 2
Query:    8 TSVLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            + +LSLIIN FYSNKEIFLRELISN+SDAL+KIR+E++ D  +++ QP+ +I +  DK NNTL+I DSGIGMTKADLVNNLGTIA+SGT+ FMEAL AG+D+S
Sbjct:   20 SQLLSLIINAFYSNKEIFLRELISNASDALEKIRYEAIKDPKQIEDQPDYYIRLYADKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMS 122          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.615e-35
Identity = 71/103 (68.93%), Postives = 89/103 (86.41%), Query Frame = 2
Query:    8 TSVLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            + +LSLIIN FYSNKEIFLRELISN+SDAL+KIR+E++ D  +++ QP+ +I +  DK NNTL+I DSGIGMTKADLVNNLGTIA+SGT+ FMEAL AG+D+S
Sbjct:   20 SQLLSLIINAFYSNKEIFLRELISNASDALEKIRYEAIKDPKQIEDQPDYYIRLYADKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMS 122          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.615e-35
Identity = 73/103 (70.87%), Postives = 87/103 (84.47%), Query Frame = 2
Query:    8 TSVLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            T ++SLIINT YSNKEIFLRELISN+SDALDKIR++SL+D  +L+ +P+LFI I P      L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL+AGADVS
Sbjct:   13 TQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVS 115          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 7.334e-35
Identity = 75/102 (73.53%), Postives = 89/102 (87.25%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAG-ADVS 316
            ++SLIINTFYSNKE+FLRELISN+SDALDKIR++SLTD S L+++ EL I IIPDKT  TL++IDSGIGMTK D+V NLGTIARSGTK FME L +G AD+S
Sbjct:   18 LMSLIINTFYSNKEVFLRELISNASDALDKIRYQSLTDASVLESKTELEIKIIPDKTAKTLTLIDSGIGMTKTDMVKNLGTIARSGTKNFMEQLQSGAADIS 119          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP82_ASHGO (Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP82 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 9.578e-35
Identity = 73/103 (70.87%), Postives = 86/103 (83.50%), Query Frame = 2
Query:    8 TSVLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            T ++SLIINT YSNKEIFLRELISN+SDALDKIR++SL+D   L++ PELFI + P      L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL+AGADVS
Sbjct:   14 TQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPKVLESDPELFIRLTPKPEEKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVS 116          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 145.206 bits (365), Expect = 9.578e-35
Identity = 72/103 (69.90%), Postives = 87/103 (84.47%), Query Frame = 2
Query:    8 TSVLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            T ++SLIINT YSNKEIFLRELISN+SDALDKIR+++L+D  +L+ +P+LFI I P      L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL+AGADVS
Sbjct:   13 TQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQALSDPKQLETEPDLFIRITPKPEEKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVS 115          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP83_LEIAM (Heat shock protein 83 OS=Leishmania amazonensis GN=HSP83 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.251e-34
Identity = 72/101 (71.29%), Postives = 86/101 (85.15%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            ++SLIINTFYSNKEIFLR++ISN+SDA DKIR++SLTD S L     L + ++PDK N TL++ D+GIGMTKADLVNNLGTIARSGTK FMEAL AGAD+S
Sbjct:   14 LMSLIINTFYSNKEIFLRDVISNASDACDKIRYQSLTDPSVLGDATRLCVRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALEAGADMS 114          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP85_TRYCR (Heat shock-like 85 kDa protein OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.634e-34
Identity = 72/101 (71.29%), Postives = 87/101 (86.14%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            ++SLIINTFYSNKEIFLRELISNSSDA DKIR++SLT+++ L  +  L I ++PDK N TL++ D+GIGMTKA+LVNNLGTIARSGTK FMEAL AG D+S
Sbjct:   14 LMSLIINTFYSNKEIFLRELISNSSDACDKIRYQSLTNQAVLGDESHLRIRVVPDKANKTLTVEDTGIGMTKAELVNNLGTIARSGTKAFMEALEAGGDMS 114          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP83_DROPB (Heat shock protein 83 (Fragment) OS=Drosophila pseudoobscura bogotana GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.171e-32
Identity = 72/101 (71.29%), Postives = 82/101 (81.19%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            ++SLIINTFYSNKEIFLRELISN+SDALDKIR+ S TD  KL          IP+KT  TL+IID+GI MTK+DLVNNLGTIA+SGTK FMEAL AGAD+S
Sbjct:   17 LMSLIINTFYSNKEIFLRELISNASDALDKIRYXSXTDPXKLXXXXXXXXXXIPNKTAGTLTIIDTGIXMTKSDLVNNLGTIAKSGTKAFMEALQAGADIS 117          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 9.912e-32
Identity = 69/96 (71.88%), Postives = 83/96 (86.46%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 301
            ++SLIINTFYSN+EIFL+ELISN+SDALDKIR+ESLTD SKLD+  EL I IIP+    TL+++D+GIGMTKADL+NNL TIA+SGTK  MEAL A
Sbjct:   24 LISLIINTFYSNEEIFLQELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLALVDTGIGMTKADLINNLRTIAKSGTKACMEALQA 119          
The following BLAST results are available for this feature:
BLAST of DN617894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HSP90_THEPA5.615e-3568.93Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]
HSP90_THEAN5.615e-3568.93Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HSP82_YEAST5.615e-3570.87ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HSC90_DICDI7.334e-3573.53Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
HSP82_ASHGO9.578e-3570.87Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP... [more]
HSC82_YEAST9.578e-3569.90ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
HSP83_LEIAM1.251e-3471.29Heat shock protein 83 OS=Leishmania amazonensis GN... [more]
HSP85_TRYCR1.634e-3471.29Heat shock-like 85 kDa protein OS=Trypanosoma cruz... [more]
HSP83_DROPB1.171e-3271.29Heat shock protein 83 (Fragment) OS=Drosophila pse... [more]
H90B3_HUMAN9.912e-3271.88Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01N08_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001N08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617894 ID=DN617894; Name=DN617894; organism=Citrus sinensis; type=EST; length=316bp
GAGATCAACCAGTGTGTTGAGTTTGATCATCAACACCTTTTACAGCAACA
AGGAGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGAT
AAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACC
AGAGCTTTTCATCCACATTATCCCTGATAAGACCAACAACACTTTGTCTA
TTATTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCTT
GGTACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGC
TGGGGCGGATGTGAGC
back to top