DN617894

Overview
NameDN617894
Unique NameDN617894
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length316
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11542 contig Csv1_Contig11542:156..471. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.174e-24
Identity = 59/103 (57.28%), Postives = 75/103 (72.82%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA--QPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            ++ +IIN+ YSNK+IFLRELISN+SDALDKIRF +LTDK  +      +L I I  DK N  LSI D G+GMTK DL+ NLGTIA+SGT  F+E +  G D++
Sbjct:   89 LMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKEVMGEGDTAKLEIQIKLDKENKILSIRDRGVGMTKEDLIKNLGTIAKSGTSAFVEKMQTGGDLN 191
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_RUTMC (Chaperone protein htpG OS=Ruthia magnifica subsp. Calyptogena magnifica GN=htpG PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.002e-24
Identity = 52/96 (54.17%), Postives = 80/96 (83.33%), Query Frame = 2 
Query:    8 TSVLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 295
            + +L L+I++ YSNKEIFLREL+SNSSDA+DK++F+SL+D + ++ + EL IHI  +K  +T++I D+GIGMT+A++  N+GTIA SGTK+F+++L
Sbjct:   14 SQLLDLMIHSLYSNKEIFLRELVSNSSDAVDKLKFKSLSDDTLIEGKEELQIHINTNKDASTITITDNGIGMTEAEVNKNIGTIANSGTKKFLKSL 109
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: ENPL_PONAB (Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.002e-24
Identity = 55/94 (58.51%), Postives = 70/94 (74.47%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 295
            ++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L    EL + I  DK  N L + D+G+GMT+ +LV NLGTIA+SGT EF+  +
Sbjct:   85 MMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALSGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 178
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: ENPL_MACFA (Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.002e-24
Identity = 55/94 (58.51%), Postives = 70/94 (74.47%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 295
            ++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L    EL + I  DK  N L + D+G+GMT+ +LV NLGTIA+SGT EF+  +
Sbjct:   85 MMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALSGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 178
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: ENPL_HUMAN (Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.002e-24
Identity = 55/94 (58.51%), Postives = 70/94 (74.47%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 295
            ++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L    EL + I  DK  N L + D+G+GMT+ +LV NLGTIA+SGT EF+  +
Sbjct:   85 MMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALSGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 178
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: ENPL_RABIT (Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.614e-24
Identity = 55/94 (58.51%), Postives = 69/94 (73.40%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 295
            ++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD+  L    EL + I  DK  N L + D+G+GMT+ +LV NLGTIA+SGT EF+  +
Sbjct:    6 MMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDEQALSGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 99
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: ENPL_MOUSE (Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 3.415e-24
Identity = 55/94 (58.51%), Postives = 70/94 (74.47%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 295
            ++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L    EL + I  DK  N L + D+G+GMT+ +LV NLGTIA+SGT EF+  +
Sbjct:   85 MMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 178
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: ENPL_CANFA (Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.415e-24
Identity = 55/94 (58.51%), Postives = 70/94 (74.47%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 295
            ++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L    EL + I  DK  N L + D+G+GMT+ +LV NLGTIA+SGT EF+  +
Sbjct:   85 MMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 178
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: ENPL_BOVIN (Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.415e-24
Identity = 55/94 (58.51%), Postives = 70/94 (74.47%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 295
            ++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L    EL + I  DK  N L + D+G+GMT+ +LV NLGTIA+SGT EF+  +
Sbjct:   85 MMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 178
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_NITEC (Chaperone protein htpG OS=Nitrosomonas eutropha (strain C91) GN=htpG PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.824e-24
Identity = 51/94 (54.26%), Postives = 77/94 (81.91%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 295
            +L L+I++ YSNKEIFLRELISN+SDA DK+RFE L+D +  ++ P+L I I  DK   T++I D+GIGM++ ++++N+GTIA+SGT+EF+++L
Sbjct:   19 LLRLMIHSLYSNKEIFLRELISNASDAADKLRFEGLSDTALYESDPDLKIRIAYDKEARTITISDNGIGMSRQEVIDNIGTIAKSGTREFIDSL 112
The following BLAST results are available for this feature:
BLAST of DN617894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
ENPL_HORVU1.174e-2457.28Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
HTPG_RUTMC2.002e-2454.17Chaperone protein htpG OS=Ruthia magnifica subsp. ... [more]
ENPL_PONAB2.002e-2458.51Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1[more]
ENPL_MACFA2.002e-2458.51Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2... [more]
ENPL_HUMAN2.002e-2458.51Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1[more]
ENPL_RABIT2.614e-2458.51Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN... [more]
ENPL_MOUSE3.415e-2458.51Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2[more]
ENPL_CANFA3.415e-2458.51Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV... [more]
ENPL_BOVIN3.415e-2458.51Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1[more]
HTPG_NITEC5.824e-2454.26Chaperone protein htpG OS=Nitrosomonas eutropha (s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01N08_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001N08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617894 ID=DN617894; Name=DN617894; organism=Citrus sinensis; type=EST; length=316bp
GAGATCAACCAGTGTGTTGAGTTTGATCATCAACACCTTTTACAGCAACA
AGGAGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGAT
AAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACC
AGAGCTTTTCATCCACATTATCCCTGATAAGACCAACAACACTTTGTCTA
TTATTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCTT
GGTACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGC
TGGGGCGGATGTGAGC
back to top