DN617894

Overview
NameDN617894
Unique NameDN617894
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length316
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11542 contig Csv1_Contig11542:156..471. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_ALHEH (Chaperone protein htpG OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.824e-24
Identity = 52/94 (55.32%), Postives = 75/94 (79.79%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 295
            +L L+I++ YSNK+IFLRELISN+SDA+DK+RF+SL D+S L+ + +L I +  DK   T+++ D+GIGMT+ ++  NLGTIARSGTK F++ L
Sbjct:   19 LLHLMIHSLYSNKDIFLRELISNASDAIDKLRFQSLQDESLLEGEGDLRIRVSVDKDARTITVADNGIGMTRDEVAENLGTIARSGTKAFLDQL 112          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: ENPL_RAT (Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 7.607e-24
Identity = 54/94 (57.45%), Postives = 70/94 (74.47%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 295
            ++ LIIN+ Y NKEIFLRELISN+SDALDKIR  SLTD++ L    EL + I  D+  N L + D+G+GMT+ +LV NLGTIA+SGT EF+  +
Sbjct:   85 MMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDREKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKM 178          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.607e-24
Identity = 59/103 (57.28%), Postives = 74/103 (71.84%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA--QPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            ++ +IIN+ YSNK+IFLRELISN+SDALDKIRF +LTDK  L      +L I I  DK    LSI D GIGMTK DL+ NLGTIA+SGT  F+E + +  D++
Sbjct:   88 LMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKDVLGEGDTAKLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQSSGDLN 190          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_TREDE (Chaperone protein htpG OS=Treponema denticola GN=htpG PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 9.935e-24
Identity = 56/96 (58.33%), Postives = 76/96 (79.17%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 301
            +LSLII++ YSNKEIFLREL+SN+SDALDK+++ +L+D++    + E  I I  D T NTL++ D+G+GM + DL NNLGTIARSGTK F++ LAA
Sbjct:   13 LLSLIIHSLYSNKEIFLRELVSNASDALDKLKYLTLSDEAYKQIKFEPRIDICFDDTANTLTVRDTGLGMNEEDLKNNLGTIARSGTKAFLDQLAA 108          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_HALHL (Chaperone protein htpG OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 9.935e-24
Identity = 51/94 (54.26%), Postives = 74/94 (78.72%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 295
            +LSL+I++ YSN+E+FLRELISN+SDA+DK+RFE+L  +S  +  PEL I +  D    T+++ID+GIGM++ D++ NLGTIA SGT+ F+E L
Sbjct:   19 LLSLMIHSVYSNREVFLRELISNASDAIDKLRFEALQQESLYEDDPELKIRVEADPEARTVTVIDNGIGMSREDVIENLGTIAHSGTRRFLEQL 112          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJR (Chaperone protein htpG OS=Campylobacter jejuni (strain RM1221) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.695e-23
Identity = 58/98 (59.18%), Postives = 72/98 (73.47%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 307
            +L L+I++ YSNKEIFLRELISN+SDALDK+ F S++D      + E  I I  DK   TLSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:   10 LLQLMIHSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLENLSGDA 107          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJJ (Chaperone protein htpG OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.695e-23
Identity = 58/98 (59.18%), Postives = 72/98 (73.47%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 307
            +L L+I++ YSNKEIFLRELISN+SDALDK+ F S++D      + E  I I  DK   TLSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:   10 LLQLMIHSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLENLSGDA 107          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJE (Chaperone protein htpG OS=Campylobacter jejuni GN=htpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.695e-23
Identity = 58/98 (59.18%), Postives = 72/98 (73.47%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 307
            +L L+I++ YSNKEIFLRELISN+SDALDK+ F S++D      + E  I I  DK   TLSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:   10 LLQLMIHSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLENLSGDA 107          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJD (Chaperone protein htpG OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.695e-23
Identity = 58/98 (59.18%), Postives = 72/98 (73.47%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 307
            +L L+I++ YSNKEIFLRELISN+SDALDK+ F S++D      + E  I I  DK   TLSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:   10 LLQLMIHSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKNDLINNLGTIAKSGTKSFLENLSGDA 107          
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJ8 (Chaperone protein htpG OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.695e-23
Identity = 58/98 (59.18%), Postives = 72/98 (73.47%), Query Frame = 2
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA 307
            +L L+I++ YSNKEIFLRELISN+SDALDK+ F S++D      + E  I I  DK   TLSI D+GIGM K DL+NNLGTIA+SGTK F+E L+  A
Sbjct:   10 LLQLMIHSLYSNKEIFLRELISNASDALDKLNFLSVSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLENLSGDA 107          
The following BLAST results are available for this feature:
BLAST of DN617894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_ALHEH5.824e-2455.32Chaperone protein htpG OS=Alkalilimnicola ehrliche... [more]
ENPL_RAT7.607e-2457.45Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 S... [more]
ENPL_ARATH7.607e-2457.28Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
HTPG_TREDE9.935e-2458.33Chaperone protein htpG OS=Treponema denticola GN=h... [more]
HTPG_HALHL9.935e-2454.26Chaperone protein htpG OS=Halorhodospira halophila... [more]
HTPG_CAMJR1.695e-2359.18Chaperone protein htpG OS=Campylobacter jejuni (st... [more]
HTPG_CAMJJ1.695e-2359.18Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_CAMJE1.695e-2359.18Chaperone protein htpG OS=Campylobacter jejuni GN=... [more]
HTPG_CAMJD1.695e-2359.18Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_CAMJ81.695e-2359.18Chaperone protein htpG OS=Campylobacter jejuni sub... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01N08_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001N08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617894 ID=DN617894; Name=DN617894; organism=Citrus sinensis; type=EST; length=316bp
GAGATCAACCAGTGTGTTGAGTTTGATCATCAACACCTTTTACAGCAACA
AGGAGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGAT
AAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACC
AGAGCTTTTCATCCACATTATCCCTGATAAGACCAACAACACTTTGTCTA
TTATTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCTT
GGTACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGC
TGGGGCGGATGTGAGC
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