DN617892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU1_SHEB5 (Elongation factor Tu 1 OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=tuf1 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.404e-28 Identity = 60/90 (66.67%), Postives = 71/90 (78.89%), Query Frame = -2 Query: 262 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 531 VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD +KMVV LI P+A ++G+RFAIREGG+TVGAGV+ II Sbjct: 309 VYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKII 393
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU1_PASMU (Elongation factor Tu-A OS=Pasteurella multocida GN=tufA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.404e-28 Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD +KM V LI P+A +QG+RFAIREGG+TVGAGV+ II+ Sbjct: 309 VYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMTVSLIHPIAMDQGLRFAIREGGRTVGAGVVAKIIK 394
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_SCEOB (Elongation factor Tu, chloroplastic OS=Scenedesmus obliquus GN=tufA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.446e-28 Identity = 59/100 (59.00%), Postives = 77/100 (77.00%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMN---------DKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVL KEEGGRHSPF GY+PQF++RTTDVTG++ S + ++ +KM MPGDR+++ V+LI PVA E+GMRFAIREGG+TVGAGV+ +I+E Sbjct: 319 VYVLTKEEGGRHSPFLVGYQPQFFIRTTDVTGKIVSFTHIQMKNPSSVAEEHSNKMAMPGDRIEVTVQLIYPVAVEKGMRFAIREGGRTVGAGVVTNILE 418
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_PETMO (Elongation factor Tu OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=tuf PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.446e-28 Identity = 61/91 (67.03%), Postives = 71/91 (78.02%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PF GYRPQFY+RT DVTG + + ++MVMPGD + M VELI PVA E+GMRFAIREGG+TVGAGV+ IIE Sbjct: 313 VYVLKKEEGGRHTPFTKGYRPQFYIRTADVTGTLVEFSSG----AEMVMPGDNINMTVELIYPVALEEGMRFAIREGGRTVGAGVVTEIIE 399
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_NITOC (Elongation factor Tu OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=tuf1 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.446e-28 Identity = 57/91 (62.64%), Postives = 71/91 (78.02%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVL K+EGGRH+PFF GYRPQFY RTTDVTG + D + +MVMPGD ++M V LI P+A E+G+RFA+REGG+TVGAGV+ +IE Sbjct: 311 VYVLSKDEGGRHTPFFTGYRPQFYFRTTDVTGAI-----DLPDGVEMVMPGDNIQMTVSLIAPIAMEEGLRFAVREGGRTVGAGVVSKVIE 396
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_MARAV (Elongation factor Tu OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=tuf PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.446e-28 Identity = 62/91 (68.13%), Postives = 69/91 (75.82%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD VKM V LI P+A E G+RFAIREGG+TVGAGV+ IIE Sbjct: 313 VYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSC-----ELPEGVEMVMPGDNVKMTVTLIAPIAMEDGLRFAIREGGRTVGAGVVAKIIE 398
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_FRAP2 (Elongation factor Tu OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=tuf PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.446e-28 Identity = 59/91 (64.84%), Postives = 71/91 (78.02%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVL KEEGGRH+PFF GYRPQFY RTTD+TG V + E +MVMPGD +KM + LI P+A ++G+RFAIREGG+TVGAGV+ IIE Sbjct: 309 VYVLSKEEGGRHTPFFKGYRPQFYFRTTDITGAV-----ELPEGVEMVMPGDNIKMTITLINPIAMDEGLRFAIREGGRTVGAGVVAKIIE 394
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_BAUCH (Elongation factor Tu OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=tuf PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.446e-28 Identity = 57/91 (62.64%), Postives = 72/91 (79.12%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + + +MVMPGD +KM+V LI P+A +QG+RFAIREGG+TVGAG++ IIE Sbjct: 309 VYILNKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPI-----DVEMVMPGDNIKMIVNLIAPIAMDQGLRFAIREGGRTVGAGIVTDIIE 394
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_SHEDO (Elongation factor Tu OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=tuf PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.806e-28 Identity = 60/90 (66.67%), Postives = 70/90 (77.78%), Query Frame = -2 Query: 262 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 531 VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+ II Sbjct: 309 VYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLIYPIAMDDGLRFAIREGGRTVGAGVVAKII 393
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_SHEAM (Elongation factor Tu OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=tuf1 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.806e-28 Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD +KMVV LI P+A ++G+RFAIREGG+TVGAGV+ I E Sbjct: 309 VYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKIHE 394 The following BLAST results are available for this feature:
BLAST of DN617892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617892 ID=DN617892; Name=DN617892; organism=Citrus sinensis; type=EST; length=535bpback to top |