DN617892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_PSEFS (Elongation factor Tu OS=Pseudomonas fluorescens (strain SBW25) GN=tuf PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.293e-27 Identity = 61/91 (67.03%), Postives = 69/91 (75.82%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD +KMVV LI +A E G+RFAIREGG+TVGAGV+ IIE Sbjct: 312 VYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGNC-----ELPEGVEMVMPGDNIKMVVTLIKTIAMEDGLRFAIREGGRTVGAGVVAKIIE 397
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_MAGSA (Elongation factor Tu OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=tuf1 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.293e-27 Identity = 59/90 (65.56%), Postives = 71/90 (78.89%), Query Frame = -2 Query: 259 YVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 528 Y+L KEEGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGD VKM+V LI P+A +QG+RFAIREGG+TVGAGV+ II+ Sbjct: 312 YILNKEEGGRHTPFFTNYRPQFYFRTTDVTGVVAL-----PEGTEMVMPGDNVKMIVTLIAPIAMDQGLRFAIREGGRTVGAGVVAKIIK 396
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_LAWIP (Elongation factor Tu OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=tuf PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.293e-27 Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVL KEEGGRH+PFF+GYRPQFY RTTDVTG ++ +E +MVMPGD VELI P+A EQG+RFAIREGG+TVGAGV+ I+E Sbjct: 312 VYVLSKEEGGRHTPFFSGYRPQFYCRTTDVTGVITL-----NEGVEMVMPGDNATFNVELIYPIAMEQGLRFAIREGGRTVGAGVVTEIVE 397
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_DINSH (Elongation factor Tu OS=Dinoroseobacter shibae (strain DFL 12) GN=tuf1 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.293e-27 Identity = 60/90 (66.67%), Postives = 70/90 (77.78%), Query Frame = -2 Query: 259 YVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 528 Y+L KEEGGRH+PFFA YRPQFY RTTDVTG V+ E ++MVMPGD +K VELI P+A E G+RFAIREGG+TVGAGV+ IIE Sbjct: 307 YILTKEEGGRHTPFFANYRPQFYFRTTDVTGTVTL-----PEGTEMVMPGDNLKFGVELIAPIAMEDGLRFAIREGGRTVGAGVVSKIIE 391
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_CLOPS (Elongation factor Tu OS=Clostridium perfringens (strain SM101 / Type A) GN=tuf1 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.293e-27 Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD + M VELI +A ++G+RFAIREGG+TVG+GV+ SIIE Sbjct: 312 VYVLKKEEGGRHTPFFDGYRPQFYFRTTDVTGSIK-----LPEGMEMVMPGDHIDMEVELITEIAMDEGLRFAIREGGRTVGSGVVTSIIE 397
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_CLOPE (Elongation factor Tu OS=Clostridium perfringens GN=tufA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.293e-27 Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD + M VELI +A ++G+RFAIREGG+TVG+GV+ SIIE Sbjct: 312 VYVLKKEEGGRHTPFFDGYRPQFYFRTTDVTGSIK-----LPEGMEMVMPGDHIDMEVELITEIAMDEGLRFAIREGGRTVGSGVVTSIIE 397
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_CLOP1 (Elongation factor Tu OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=tuf1 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.293e-27 Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD + M VELI +A ++G+RFAIREGG+TVG+GV+ SIIE Sbjct: 312 VYVLKKEEGGRHTPFFDGYRPQFYFRTTDVTGSIK-----LPEGMEMVMPGDHIDMEVELITEIAMDEGLRFAIREGGRTVGSGVVTSIIE 397
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_BORPE (Elongation factor Tu OS=Bordetella pertussis GN=tuf1 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.293e-27 Identity = 57/91 (62.64%), Postives = 71/91 (78.02%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VY+L KEEGGRH+PFF GYRPQFY RTTDVTG + D + +MV+PGD V M V+L+ P+A E+G+RFAIREGG+TVGAGV+ II+ Sbjct: 311 VYILSKEEGGRHTPFFNGYRPQFYFRTTDVTGTI-----DLPADKEMVLPGDNVSMTVKLLAPIAMEEGLRFAIREGGRTVGAGVVAKIIK 396
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_BORPA (Elongation factor Tu OS=Bordetella parapertussis GN=tuf1 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.293e-27 Identity = 57/91 (62.64%), Postives = 71/91 (78.02%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VY+L KEEGGRH+PFF GYRPQFY RTTDVTG + D + +MV+PGD V M V+L+ P+A E+G+RFAIREGG+TVGAGV+ II+ Sbjct: 311 VYILSKEEGGRHTPFFNGYRPQFYFRTTDVTGTI-----DLPADKEMVLPGDNVSMTVKLLAPIAMEEGLRFAIREGGRTVGAGVVAKIIK 396
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_BORBR (Elongation factor Tu OS=Bordetella bronchiseptica GN=tuf1 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.293e-27 Identity = 57/91 (62.64%), Postives = 71/91 (78.02%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VY+L KEEGGRH+PFF GYRPQFY RTTDVTG + D + +MV+PGD V M V+L+ P+A E+G+RFAIREGG+TVGAGV+ II+ Sbjct: 311 VYILSKEEGGRHTPFFNGYRPQFYFRTTDVTGTI-----DLPADKEMVLPGDNVSMTVKLLAPIAMEEGLRFAIREGGRTVGAGVVAKIIK 396 The following BLAST results are available for this feature:
BLAST of DN617892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617892 ID=DN617892; Name=DN617892; organism=Citrus sinensis; type=EST; length=535bpback to top |