DN617892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_CHLVU (Elongation factor Tu, chloroplastic OS=Chlorella vulgaris GN=tufA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.514e-33 Identity = 63/90 (70.00%), Postives = 78/90 (86.67%), Query Frame = -2 Query: 262 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 531 VYVL KEEGGRH+PFF GYRPQFY+RTTDVTG++ S D + ++MVMPGDR+KM+VELI P+A E+GMRFAIREGG+TVGAGV+ +I+ Sbjct: 319 VYVLNKEEGGRHTPFFPGYRPQFYVRTTDVTGKIESFRADDNTATQMVMPGDRIKMIVELIQPIAIEKGMRFAIREGGRTVGAGVVSTIV 408
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_PROMS (Elongation factor Tu OS=Prochlorococcus marinus (strain AS9601) GN=tuf PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 4.590e-33 Identity = 64/91 (70.33%), Postives = 78/91 (85.71%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ +D +MVMPGDR+KM ELI PVA EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 309 VYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTSDDGSNVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKILK 399
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_PROM9 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9312) GN=tuf PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 4.590e-33 Identity = 64/91 (70.33%), Postives = 78/91 (85.71%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ +D +MVMPGDR+KM ELI PVA EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 309 VYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTSDDGSNVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKILK 399
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_PROM0 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9301) GN=tuf PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 4.590e-33 Identity = 64/91 (70.33%), Postives = 78/91 (85.71%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ +D +MVMPGDR+KM ELI PVA EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 309 VYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTSDDGSNVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKILK 399
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_LEPTE (Elongation factor Tu, chloroplastic OS=Leptosira terrestris GN=tufA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 4.590e-33 Identity = 61/90 (67.78%), Postives = 79/90 (87.78%), Query Frame = -2 Query: 262 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 531 VY+L ++EGGRH+PFFAGYRPQFY+RTTDVTG++ + D D+ ++MVMPGDR+KM VELI P+A E+GMRFAIREGG+TVGAGV+ +I+ Sbjct: 319 VYILTRDEGGRHTPFFAGYRPQFYVRTTDVTGKIETFRTDDDQPTQMVMPGDRIKMEVELIQPIAIEKGMRFAIREGGRTVGAGVVSAIV 408
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_PROMA (Elongation factor Tu OS=Prochlorococcus marinus GN=tuf PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.994e-33 Identity = 65/91 (71.43%), Postives = 77/91 (84.62%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ D +MVMPGDR+KM ELI PVA EQGMRFAIREGG+T+GAGV+ II+ Sbjct: 309 VYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTADDGSSVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIK 399
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_PROM4 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9211) GN=tuf PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.994e-33 Identity = 65/91 (71.43%), Postives = 77/91 (84.62%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ D +MVMPGDR+KM ELI PVA EQGMRFAIREGG+T+GAGV+ II+ Sbjct: 309 VYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTADDGSNVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIK 399
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_OLTVI (Elongation factor Tu, chloroplastic OS=Oltmannsiellopsis viridis GN=tufA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.994e-33 Identity = 65/90 (72.22%), Postives = 77/90 (85.56%), Query Frame = -2 Query: 262 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 531 VYVL KEEGGRH+PFF GYRPQFY+RTTDVTG++ S + D S+MVMPGDRVKM+VELI P+A E+GMRFAIREGG+TVGAGV+ I+ Sbjct: 320 VYVLTKEEGGRHTPFFPGYRPQFYVRTTDVTGKIESFVADDGSASQMVMPGDRVKMLVELINPIAVEKGMRFAIREGGRTVGAGVVSEIL 409
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_SYNPX (Elongation factor Tu OS=Synechococcus sp. (strain WH8102) GN=tuf PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.022e-32 Identity = 65/91 (71.43%), Postives = 76/91 (83.52%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ D +MVMPGDR+KM ELI PVA E GMRFAIREGG+T+GAGV+ IIE Sbjct: 309 VYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTADDGSAVEMVMPGDRIKMTGELICPVAMENGMRFAIREGGRTIGAGVVSKIIE 399
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_ACAM1 (Elongation factor Tu OS=Acaryochloris marina (strain MBIC 11017) GN=tuf PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.022e-32 Identity = 63/91 (69.23%), Postives = 77/91 (84.62%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VY+LKK+EGGRH+PFF GYRPQFY+RTTDVTG +S+ D ++MVMPGDR+KM VELI P+A EQGMRFAIREGG+TVGAGV+ I++ Sbjct: 319 VYILKKDEGGRHTPFFPGYRPQFYVRTTDVTGTISAFTADDGSAAEMVMPGDRIKMTVELINPIAIEQGMRFAIREGGRTVGAGVVSKILK 409 The following BLAST results are available for this feature:
BLAST of DN617892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617892 ID=DN617892; Name=DN617892; organism=Citrus sinensis; type=EST; length=535bpback to top |