DN617892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_SYNP6 (Elongation factor Tu OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=tuf PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.335e-32 Identity = 63/91 (69.23%), Postives = 76/91 (83.52%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFF GYRPQFY+RTTDVTG +S D ++MV+PGDR+KM VELI P+A EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 319 VYVLKKEEGGRHTPFFPGYRPQFYVRTTDVTGAISDFTADDGSAAEMVIPGDRIKMTVELINPIAIEQGMRFAIREGGRTIGAGVVSKILQ 409
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_SYNE7 (Elongation factor Tu OS=Synechococcus elongatus (strain PCC 7942) GN=tuf PE=3 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 1.335e-32 Identity = 63/91 (69.23%), Postives = 76/91 (83.52%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFF GYRPQFY+RTTDVTG +S D ++MV+PGDR+KM VELI P+A EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 319 VYVLKKEEGGRHTPFFPGYRPQFYVRTTDVTGAISDFTADDGSAAEMVIPGDRIKMTVELINPIAIEQGMRFAIREGGRTIGAGVVSKILQ 409
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_GLOVI (Elongation factor Tu OS=Gloeobacter violaceus GN=tufA PE=3 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 1.335e-32 Identity = 62/91 (68.13%), Postives = 78/91 (85.71%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VY+L KEEGGRH+PFFAGYRPQFY+RTTDVTG + + +D+ + ++MVMPGDR+KM VELI P+A E GMRFAIREGG+TVGAGV+ I++ Sbjct: 319 VYILSKEEGGRHTPFFAGYRPQFYVRTTDVTGTIVTFTDDEGKSAEMVMPGDRIKMTVELINPIAIEDGMRFAIREGGRTVGAGVVSKILK 409
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_TRIEI (Elongation factor Tu OS=Trichodesmium erythraeum (strain IMS101) GN=tuf PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.744e-32 Identity = 64/91 (70.33%), Postives = 75/91 (82.42%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFF YRPQFY+RTTDVTG + S D ++MVMPGDR+KM V+LI PVA EQGMRFAIREGG+T+GAGV+ I+E Sbjct: 319 VYVLKKEEGGRHTPFFPNYRPQFYIRTTDVTGAIESFTADDGSVAEMVMPGDRIKMTVQLINPVAIEQGMRFAIREGGRTIGAGVVSKIVE 409
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_CYACA (Elongation factor Tu, chloroplastic OS=Cyanidium caldarium GN=tufA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.744e-32 Identity = 63/91 (69.23%), Postives = 75/91 (82.42%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVL KEEGGRH+PFF GYRPQFY+RTTDVTG +S D ++MV+PGDR+KM VELI PVA EQGMRFAIREGG+TVGAG++ I++ Sbjct: 320 VYVLNKEEGGRHTPFFPGYRPQFYVRTTDVTGNISQFTTDDGGSAEMVLPGDRIKMTVELIHPVAIEQGMRFAIREGGRTVGAGIVSKILD 410
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_SYNY3 (Elongation factor Tu OS=Synechocystis sp. (strain PCC 6803) GN=tuf PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.278e-32 Identity = 64/91 (70.33%), Postives = 75/91 (82.42%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFFA YRPQFY+RTTDVTG + S D +MVMPGDR+KM VELI P+A EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 309 VYVLKKEEGGRHTPFFANYRPQFYVRTTDVTGTIKSYTADDGSAVEMVMPGDRIKMTVELINPIAIEQGMRFAIREGGRTIGAGVVSKILK 399
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_PROMM (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9313) GN=tuf PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.278e-32 Identity = 64/91 (70.33%), Postives = 76/91 (83.52%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ + +MVMPGD +KM ELI PVA EQGMRFAIREGG+T+GAGV+ IIE Sbjct: 309 VYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVEMVMPGDNIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIE 399
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_ASTLO (Elongation factor Tu, plastid OS=Astasia longa GN=tufA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.278e-32 Identity = 62/91 (68.13%), Postives = 78/91 (85.71%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VY+L KEEGGRH+PFF GY+PQFY+RTTDVTG++ S +D +MVMPGD++KM+VEL+ P+A E+GMRFAIREGGKTVGAGVI +II+ Sbjct: 319 VYILTKEEGGRHTPFFEGYKPQFYVRTTDVTGKIESFKSDDGTTVQMVMPGDKIKMIVELVQPIAIEKGMRFAIREGGKTVGAGVIINIID 409
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_THEEB (Elongation factor Tu OS=Thermosynechococcus elongatus (strain BP-1) GN=tuf PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.975e-32 Identity = 63/91 (69.23%), Postives = 77/91 (84.62%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVL ++EGGR +PFFAGYRPQFY+RTTDVTG ++S +D ++MVMPGDR+KM VELI P+A EQGMRFAIREGG+T+GAGV+ IIE Sbjct: 319 VYVLTEKEGGRKTPFFAGYRPQFYVRTTDVTGTITSFTSDDGSAAEMVMPGDRIKMTVELIQPIAIEQGMRFAIREGGRTIGAGVVSKIIE 409
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_PROM3 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9303) GN=tuf PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 5.075e-32 Identity = 63/91 (69.23%), Postives = 76/91 (83.52%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ + +MVMPGD +KM ELI PVA EQGMRFAIREGG+T+GAGV+ II+ Sbjct: 309 VYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVEMVMPGDNIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIQ 399 The following BLAST results are available for this feature:
BLAST of DN617892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617892 ID=DN617892; Name=DN617892; organism=Citrus sinensis; type=EST; length=535bpback to top |