DN617892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_GUITH (Elongation factor Tu, chloroplastic OS=Guillardia theta GN=tufA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 5.075e-32 Identity = 62/91 (68.13%), Postives = 76/91 (83.52%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVL KEEGGRH+PFF+GYRPQFY+RTTDVTG ++ +D ++MVMPGDR+KM +LI P+A E+GMRFAIREGG+TVGAGV+ IIE Sbjct: 318 VYVLTKEEGGRHTPFFSGYRPQFYVRTTDVTGTIAQFTSDDGSTAEMVMPGDRIKMTAQLIHPIAIEKGMRFAIREGGRTVGAGVVSKIIE 408
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_CYAME (Elongation factor Tu, chloroplastic OS=Cyanidioschyzon merolae GN=tufA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 5.075e-32 Identity = 64/91 (70.33%), Postives = 74/91 (81.32%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVL KEEGGRH+PFF GYRPQFY+RTTDVTG + D +++MVMPGDR+KM V LI PVA EQGMRFAIREGG+TVGAGV+ I+E Sbjct: 320 VYVLTKEEGGRHTPFFPGYRPQFYVRTTDVTGTIEDFTADDGSKAEMVMPGDRIKMCVNLIYPVAIEQGMRFAIREGGRTVGAGVVTKILE 410
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_SYNSC (Elongation factor Tu OS=Synechococcus sp. (strain CC9605) GN=tuf PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 6.628e-32 Identity = 63/91 (69.23%), Postives = 76/91 (83.52%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ + +MVMPGD ++M ELI PVA EQGMRFAIREGG+T+GAGV+ IIE Sbjct: 309 VYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVEMVMPGDNIQMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIE 399
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_SYNR3 (Elongation factor Tu OS=Synechococcus sp. (strain RCC307) GN=tuf PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 6.628e-32 Identity = 64/91 (70.33%), Postives = 76/91 (83.52%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ + +MVMPGD +KM ELI PVA EQGMRFAIREGG+T+GAGV+ IIE Sbjct: 309 VYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTDRDGGNVEMVMPGDNIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVTKIIE 399
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_GRATL (Elongation factor Tu, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=tufA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 6.628e-32 Identity = 62/91 (68.13%), Postives = 75/91 (82.42%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VY+L KEEGGRH+PFF+GYRPQFY+RTTDVTG ++ D ++MVMPGDR+KM ELI P+A EQGMRFAIREGG+TVGAGV+ I+E Sbjct: 319 VYILTKEEGGRHTPFFSGYRPQFYVRTTDVTGTITQFTADDGSAAEMVMPGDRIKMSAELINPIAIEQGMRFAIREGGRTVGAGVVSKILE 409
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_BIGNA (Elongation factor Tu, chloroplastic OS=Bigelowiella natans GN=tufA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 8.656e-32 Identity = 61/91 (67.03%), Postives = 79/91 (86.81%), Query Frame = -2 Query: 262 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDE-ESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 531 VY+L KEEGGRH+PFF GYRPQFY+RTTDVTG++ S+ +D+D E +MV+PGDRV M VEL+ P+A E+GMRFAIREGG+TVGAGV+ +++ Sbjct: 319 VYILTKEEGGRHTPFFKGYRPQFYVRTTDVTGKIESLKSDEDNTEMRMVVPGDRVTMSVELVQPIAIEKGMRFAIREGGRTVGAGVVSNVV 409
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS9 (Elongation factor Tu OS=Synechococcus sp. (strain CC9902) GN=tuf PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.518e-31 Identity = 62/91 (68.13%), Postives = 75/91 (82.42%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ + +MVMPGD ++M ELI PVA E GMRFAIREGG+T+GAGV+ IIE Sbjct: 309 VYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVEMVMPGDNIQMTGELICPVAMEMGMRFAIREGGRTIGAGVVSKIIE 399
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_SYNP2 (Elongation factor Tu OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=tuf PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.518e-31 Identity = 61/91 (67.03%), Postives = 74/91 (81.32%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVL KEEGGRH+PFF YRPQFY+RTTDVTG +S+ D ++MVMPGDR+KM VELI P+A EQGMRFAIREGG+T+GAG + I++ Sbjct: 319 VYVLTKEEGGRHTPFFPNYRPQFYVRTTDVTGTISAFTADDGSSAEMVMPGDRIKMTVELINPIAIEQGMRFAIREGGRTIGAGTVSKILK 409
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_RHDSA (Elongation factor Tu, chloroplastic OS=Rhodomonas salina GN=tufA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.518e-31 Identity = 61/91 (67.03%), Postives = 74/91 (81.32%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVL KEEGGRH+PFF GYRPQFY+RTTDVTG ++ D ++MVMPGDR+KM +LI P+A E+GMRFAIREGG+TVGAGV+ I+E Sbjct: 319 VYVLTKEEGGRHTPFFTGYRPQFYVRTTDVTGTIAQFTADDGSAAEMVMPGDRIKMTAQLIHPIAIEKGMRFAIREGGRTVGAGVVSKILE 409
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_CYAPA (Elongation factor Tu, cyanelle OS=Cyanophora paradoxa GN=tufA PE=3 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 3.289e-31 Identity = 59/91 (64.84%), Postives = 75/91 (82.42%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVL K+EGGRH+PFF+GYRPQFY+RTTDVTG + + D ++MVMPGDR+KM V L+ P+A EQGMRFAIREGG+T+GAGV+ I++ Sbjct: 319 VYVLTKDEGGRHTPFFSGYRPQFYVRTTDVTGSIDAFTADDGSNAEMVMPGDRIKMTVSLVHPIAIEQGMRFAIREGGRTIGAGVVSKILK 409 The following BLAST results are available for this feature:
BLAST of DN617892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617892 ID=DN617892; Name=DN617892; organism=Citrus sinensis; type=EST; length=535bpback to top |