DN617892

Overview
NameDN617892
Unique NameDN617892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length535
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_STAAN (Elongation factor Tu OS=Staphylococcus aureus (strain N315) GN=tuf PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = -2 
Query:  259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531
            VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V        E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+  II+
Sbjct:  309 VYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
[Close]
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_STAAM (Elongation factor Tu OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=tuf PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = -2 
Query:  259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531
            VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V        E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+  II+
Sbjct:  309 VYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
[Close]
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_STAAE (Elongation factor Tu OS=Staphylococcus aureus (strain Newman) GN=tuf PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = -2 
Query:  259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531
            VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V        E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+  II+
Sbjct:  309 VYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
[Close]
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_STAAC (Elongation factor Tu OS=Staphylococcus aureus (strain COL) GN=tuf PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = -2 
Query:  259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531
            VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V        E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+  II+
Sbjct:  309 VYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
[Close]
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_STAAB (Elongation factor Tu OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=tuf PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = -2 
Query:  259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531
            VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V        E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+  II+
Sbjct:  309 VYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
[Close]
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_STAA9 (Elongation factor Tu OS=Staphylococcus aureus (strain JH9) GN=tuf PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = -2 
Query:  259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531
            VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V        E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+  II+
Sbjct:  309 VYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
[Close]
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_STAA8 (Elongation factor Tu OS=Staphylococcus aureus (strain NCTC 8325) GN=tuf PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = -2 
Query:  259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531
            VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V        E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+  II+
Sbjct:  309 VYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
[Close]
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_STAA3 (Elongation factor Tu OS=Staphylococcus aureus (strain USA300) GN=tuf PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = -2 
Query:  259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531
            VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V        E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+  II+
Sbjct:  309 VYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
[Close]
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_STAA2 (Elongation factor Tu OS=Staphylococcus aureus (strain JH1) GN=tuf PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = -2 
Query:  259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531
            VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V        E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+  II+
Sbjct:  309 VYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
[Close]
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_STAA1 (Elongation factor Tu OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=tuf PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = -2 
Query:  259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531
            VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V        E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+  II+
Sbjct:  309 VYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
The following BLAST results are available for this feature:
BLAST of DN617892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_STAAN2.439e-2663.74Elongation factor Tu OS=Staphylococcus aureus (str... [more]
EFTU_STAAM2.439e-2663.74Elongation factor Tu OS=Staphylococcus aureus (str... [more]
EFTU_STAAE2.439e-2663.74Elongation factor Tu OS=Staphylococcus aureus (str... [more]
EFTU_STAAC2.439e-2663.74Elongation factor Tu OS=Staphylococcus aureus (str... [more]
EFTU_STAAB2.439e-2663.74Elongation factor Tu OS=Staphylococcus aureus (str... [more]
EFTU_STAA92.439e-2663.74Elongation factor Tu OS=Staphylococcus aureus (str... [more]
EFTU_STAA82.439e-2663.74Elongation factor Tu OS=Staphylococcus aureus (str... [more]
EFTU_STAA32.439e-2663.74Elongation factor Tu OS=Staphylococcus aureus (str... [more]
EFTU_STAA22.439e-2663.74Elongation factor Tu OS=Staphylococcus aureus (str... [more]
EFTU_STAA12.439e-2663.74Elongation factor Tu OS=Staphylococcus aureus (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01N07_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001N07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617892 ID=DN617892; Name=DN617892; organism=Citrus sinensis; type=EST; length=535bp
CCACGAGGCAAATCAACATTGAGCTGAAGCAACTGAGGAAAAGTGAGTCA
TATTGAATTATCACATGAACATTTTCCAACTAGACTTGACATGAGTTCAA
TGCAAAATAAGAACAAAACTGCAAATTATATGACATTAGGTTCTGGAAGT
TCCTAGAATGGTGAAACTAATTCCATAAAAACTTAAGAATATGAAGTTTA
ACACCGCTCAAAAAAGTAAAAGATAATCCACTGCCCATGAAAGTTCCTAG
TACTATCATTCAATGATGGACTGAATAACACCAGCTCCAACAGTCTTTCC
TCCTTCTCTGATGGCAAATCTCATCCCTTGCTCACAAGCCACTGGCATAA
TAAGCTCCACAACCATCTTGACACGGTCGCCAGGCATAACCATCTTGGAC
TCCTCGTCCTTGTCGTTCATAATAGAAGACACCCTTCCAGTCACATCAGT
GGTCCTCATGTAAAATTGAGGCCTGTAACCCGCAAAGAAAGGTGAGTGCC
TACCACCTTCTTCCTTCTTCAACACATACACAATG
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