DN617892

Overview
NameDN617892
Unique NameDN617892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length535
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_BACC4 (Elongation factor Tu OS=Bacillus cereus (strain B4264) GN=tuf PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 55/91 (60.44%), Postives = 71/91 (78.02%), Query Frame = -2
Query:  259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531
            V+VL KEEGGRH+PFFA YRPQFY RTTDVTG +        E ++MVMPGD ++M +ELI P+A E+G +F+IREGG+TVG GV+ +I+E
Sbjct:  310 VFVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIIQL-----PEGTEMVMPGDNIEMTIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE 395          
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_BACC3 (Elongation factor Tu OS=Bacillus cereus (strain 03BB102) GN=tuf PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 55/91 (60.44%), Postives = 71/91 (78.02%), Query Frame = -2
Query:  259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531
            V+VL KEEGGRH+PFFA YRPQFY RTTDVTG +        E ++MVMPGD ++M +ELI P+A E+G +F+IREGG+TVG GV+ +I+E
Sbjct:  310 VFVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIIQL-----PEGTEMVMPGDNIEMTIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE 395          
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_BACC2 (Elongation factor Tu OS=Bacillus cereus (strain G9842) GN=tuf PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 55/91 (60.44%), Postives = 71/91 (78.02%), Query Frame = -2
Query:  259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531
            V+VL KEEGGRH+PFFA YRPQFY RTTDVTG +        E ++MVMPGD ++M +ELI P+A E+G +F+IREGG+TVG GV+ +I+E
Sbjct:  310 VFVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIIQL-----PEGTEMVMPGDNIEMTIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE 395          
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_BACC0 (Elongation factor Tu OS=Bacillus cereus (strain AH820) GN=tuf PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 55/91 (60.44%), Postives = 71/91 (78.02%), Query Frame = -2
Query:  259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531
            V+VL KEEGGRH+PFFA YRPQFY RTTDVTG +        E ++MVMPGD ++M +ELI P+A E+G +F+IREGG+TVG GV+ +I+E
Sbjct:  310 VFVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIIQL-----PEGTEMVMPGDNIEMTIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE 395          
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_BACAN (Elongation factor Tu OS=Bacillus anthracis GN=tuf PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 55/91 (60.44%), Postives = 71/91 (78.02%), Query Frame = -2
Query:  259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531
            V+VL KEEGGRH+PFFA YRPQFY RTTDVTG +        E ++MVMPGD ++M +ELI P+A E+G +F+IREGG+TVG GV+ +I+E
Sbjct:  310 VFVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIIQL-----PEGTEMVMPGDNIEMTIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE 395          
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_BACAH (Elongation factor Tu OS=Bacillus thuringiensis (strain Al Hakam) GN=tuf PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 55/91 (60.44%), Postives = 71/91 (78.02%), Query Frame = -2
Query:  259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531
            V+VL KEEGGRH+PFFA YRPQFY RTTDVTG +        E ++MVMPGD ++M +ELI P+A E+G +F+IREGG+TVG GV+ +I+E
Sbjct:  310 VFVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIIQL-----PEGTEMVMPGDNIEMTIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE 395          
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_BACAC (Elongation factor Tu OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=tuf PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 55/91 (60.44%), Postives = 71/91 (78.02%), Query Frame = -2
Query:  259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531
            V+VL KEEGGRH+PFFA YRPQFY RTTDVTG +        E ++MVMPGD ++M +ELI P+A E+G +F+IREGG+TVG GV+ +I+E
Sbjct:  310 VFVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIIQL-----PEGTEMVMPGDNIEMTIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE 395          
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_BACAA (Elongation factor Tu OS=Bacillus anthracis (strain A0248) GN=tuf PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 55/91 (60.44%), Postives = 71/91 (78.02%), Query Frame = -2
Query:  259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531
            V+VL KEEGGRH+PFFA YRPQFY RTTDVTG +        E ++MVMPGD ++M +ELI P+A E+G +F+IREGG+TVG GV+ +I+E
Sbjct:  310 VFVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIIQL-----PEGTEMVMPGDNIEMTIELIAPIAIEEGTKFSIREGGRTVGYGVVATIVE 395          
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_ACIBL (Elongation factor Tu OS=Acidobacteria bacterium (strain Ellin345) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 60/90 (66.67%), Postives = 71/90 (78.89%), Query Frame = -2
Query:  262 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 531
            VYVL KEEGGRH+PFF GYRPQFY RTTDVTG V+++       ++MVMPGD V + +ELI PVA E+G+RFAIREGG+TVGAG I  II
Sbjct:  310 VYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTG-VATL----PAGTEMVMPGDNVALEIELITPVAMEKGLRFAIREGGRTVGAGTISEII 394          
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU2_HYPNA (Elongation factor Tu 2 OS=Hyphomonas neptunium (strain ATCC 15444) GN=tuf2 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.439e-26
Identity = 57/88 (64.77%), Postives = 68/88 (77.27%), Query Frame = -2
Query:  265 YVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 528
            Y+L KEEGGRH+PFF  YRPQFY RTTDVTG V        E+ +MV+PGD VKM VELI P+A ++G+RFAIREGG+TVGAGV+  I
Sbjct:  312 YILTKEEGGRHTPFFTNYRPQFYFRTTDVTGIVKL-----PEDKEMVLPGDNVKMDVELINPIAMDKGLRFAIREGGRTVGAGVVSEI 394          
The following BLAST results are available for this feature:
BLAST of DN617892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_BACC42.439e-2660.44Elongation factor Tu OS=Bacillus cereus (strain B4... [more]
EFTU_BACC32.439e-2660.44Elongation factor Tu OS=Bacillus cereus (strain 03... [more]
EFTU_BACC22.439e-2660.44Elongation factor Tu OS=Bacillus cereus (strain G9... [more]
EFTU_BACC02.439e-2660.44Elongation factor Tu OS=Bacillus cereus (strain AH... [more]
EFTU_BACAN2.439e-2660.44Elongation factor Tu OS=Bacillus anthracis GN=tuf ... [more]
EFTU_BACAH2.439e-2660.44Elongation factor Tu OS=Bacillus thuringiensis (st... [more]
EFTU_BACAC2.439e-2660.44Elongation factor Tu OS=Bacillus anthracis (strain... [more]
EFTU_BACAA2.439e-2660.44Elongation factor Tu OS=Bacillus anthracis (strain... [more]
EFTU_ACIBL2.439e-2666.67Elongation factor Tu OS=Acidobacteria bacterium (s... [more]
EFTU2_HYPNA2.439e-2664.77Elongation factor Tu 2 OS=Hyphomonas neptunium (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01N07_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001N07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617892 ID=DN617892; Name=DN617892; organism=Citrus sinensis; type=EST; length=535bp
CCACGAGGCAAATCAACATTGAGCTGAAGCAACTGAGGAAAAGTGAGTCA
TATTGAATTATCACATGAACATTTTCCAACTAGACTTGACATGAGTTCAA
TGCAAAATAAGAACAAAACTGCAAATTATATGACATTAGGTTCTGGAAGT
TCCTAGAATGGTGAAACTAATTCCATAAAAACTTAAGAATATGAAGTTTA
ACACCGCTCAAAAAAGTAAAAGATAATCCACTGCCCATGAAAGTTCCTAG
TACTATCATTCAATGATGGACTGAATAACACCAGCTCCAACAGTCTTTCC
TCCTTCTCTGATGGCAAATCTCATCCCTTGCTCACAAGCCACTGGCATAA
TAAGCTCCACAACCATCTTGACACGGTCGCCAGGCATAACCATCTTGGAC
TCCTCGTCCTTGTCGTTCATAATAGAAGACACCCTTCCAGTCACATCAGT
GGTCCTCATGTAAAATTGAGGCCTGTAACCCGCAAAGAAAGGTGAGTGCC
TACCACCTTCTTCCTTCTTCAACACATACACAATG
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