DN617892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_OLICO (Elongation factor Tu OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=tuf PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.186e-26 Identity = 58/90 (64.44%), Postives = 69/90 (76.67%), Query Frame = -2 Query: 259 YVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 528 Y+L KEEGGRH+PFF YRPQFY RTTDVTG V E ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE Sbjct: 312 YILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_LYSSC (Elongation factor Tu OS=Lysinibacillus sphaericus (strain C3-41) GN=tuf PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.186e-26 Identity = 57/89 (64.04%), Postives = 70/89 (78.65%), Query Frame = -2 Query: 265 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 531 VYVL KEEGGRH+PFF+ YRPQFY RTTDVTG + + E +MVMPGD ++M VELI P+A E+G +F+IREGG+TVGAGV+ SI Sbjct: 310 VYVLSKEEGGRHTPFFSNYRPQFYFRTTDVTG-----ICNLPEGVEMVMPGDNIEMTVELIAPIALEEGTKFSIREGGRTVGAGVVASI 393
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_FRASN (Elongation factor Tu OS=Frankia sp. (strain EAN1pec) GN=tuf PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.186e-26 Identity = 56/91 (61.54%), Postives = 70/91 (76.92%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VY+L K+EGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGD +M VELI P+A E+G+RFAIREGG+TVGAG + +I+ Sbjct: 312 VYILNKDEGGRHTPFFKNYRPQFYFRTTDVTGVVTL-----PEGTEMVMPGDNTEMTVELIQPIAMEEGLRFAIREGGRTVGAGQVLKVIK 397
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_CHLPD (Elongation factor Tu OS=Chlorobium phaeobacteroides (strain DSM 266) GN=tuf PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.186e-26 Identity = 57/91 (62.64%), Postives = 71/91 (78.02%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VY+L+KEEGGRH+PFF GYRPQFY RTTDVTG V+ E +MVMPGD + + VELI+P+A ++ +RFAIREGG+TVGAG + IIE Sbjct: 308 VYILRKEEGGRHTPFFNGYRPQFYFRTTDVTGSVT-----LPEGVEMVMPGDNLSVDVELIVPIAMDENLRFAIREGGRTVGAGSVTKIIE 393
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_CHLPB (Elongation factor Tu OS=Chlorobium phaeobacteroides (strain BS1) GN=tuf PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.186e-26 Identity = 57/91 (62.64%), Postives = 70/91 (76.92%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VY+LKKEEGGRH+PFF YRPQFY RTTDVTG V+ E +MVMPGD + + VELI+P+A ++ +RFAIREGG+TVGAG + IIE Sbjct: 308 VYILKKEEGGRHTPFFNNYRPQFYFRTTDVTGAVT-----LPEGVEMVMPGDNLSIEVELIVPIAMDENLRFAIREGGRTVGAGTVTQIIE 393
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_BRASO (Elongation factor Tu OS=Bradyrhizobium sp. (strain ORS278) GN=tuf PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.186e-26 Identity = 58/90 (64.44%), Postives = 69/90 (76.67%), Query Frame = -2 Query: 259 YVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 528 Y+L KEEGGRH+PFF YRPQFY RTTDVTG V E ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE Sbjct: 312 YILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_BRASB (Elongation factor Tu OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=tuf PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.186e-26 Identity = 58/90 (64.44%), Postives = 69/90 (76.67%), Query Frame = -2 Query: 259 YVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 528 Y+L KEEGGRH+PFF YRPQFY RTTDVTG V E ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE Sbjct: 312 YILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_BRAJA (Elongation factor Tu OS=Bradyrhizobium japonicum GN=tuf PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.186e-26 Identity = 58/90 (64.44%), Postives = 69/90 (76.67%), Query Frame = -2 Query: 259 YVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 528 Y+L KEEGGRH+PFF YRPQFY RTTDVTG V E ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE Sbjct: 312 YILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_BACSK (Elongation factor Tu OS=Bacillus clausii (strain KSM-K16) GN=tuf PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.186e-26 Identity = 57/91 (62.64%), Postives = 70/91 (76.92%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V E ++MVMPGD +M VELI P+A E+G RF+IREGG+TVG+GV+ +I E Sbjct: 311 VYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVVHL-----PEGTEMVMPGDNTEMTVELIAPIAIEEGTRFSIREGGRTVGSGVVSTITE 396
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_BACP2 (Elongation factor Tu OS=Bacillus pumilus (strain SAFR-032) GN=tuf PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.186e-26 Identity = 59/91 (64.84%), Postives = 70/91 (76.92%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVL KEEGGRH+PFFA YRPQFY RTTDVTG V E ++MVMPGD +M VELI +A E+G RF+IREGG+TVG+GV+ SII+ Sbjct: 311 VYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGIV-----HLPEGTEMVMPGDNTEMEVELISTIAIEEGTRFSIREGGRTVGSGVVSSIIK 396 The following BLAST results are available for this feature:
BLAST of DN617892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617892 ID=DN617892; Name=DN617892; organism=Citrus sinensis; type=EST; length=535bpback to top |