DN617892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_HERAU (Elongation factor Tu OS=Herpetosiphon aurantiacus GN=tuf PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.382e-29 Identity = 62/90 (68.89%), Postives = 74/90 (82.22%), Query Frame = -2 Query: 262 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 531 VYVLKKEEGGRHSPFF+GYRPQFY+RTTDVTG + E +MVMPGD ++M VELI+PVA EQG++FAIREGG+TVGAG++ II Sbjct: 315 VYVLKKEEGGRHSPFFSGYRPQFYVRTTDVTGAIGL-----PEGVEMVMPGDNIQMTVELIVPVAIEQGLKFAIREGGRTVGAGIVPEII 399
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU2_ROSS1 (Elongation factor Tu 2 OS=Roseiflexus sp. (strain RS-1) GN=tuf2 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.382e-29 Identity = 61/91 (67.03%), Postives = 76/91 (83.52%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFF+GYRPQFY+RTTDVTG + E +MVMPGD ++M VELI+PVA E+G+RFAIREGG+TVGAGV+ +I++ Sbjct: 316 VYVLKKEEGGRHTPFFSGYRPQFYIRTTDVTGAIHL-----PEGVEMVMPGDNIEMTVELIVPVAIEEGLRFAIREGGRTVGAGVVSAIVD 401
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU1_ROSS1 (Elongation factor Tu 1 OS=Roseiflexus sp. (strain RS-1) GN=tuf1 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.382e-29 Identity = 61/91 (67.03%), Postives = 76/91 (83.52%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFF+GYRPQFY+RTTDVTG + E +MVMPGD ++M VELI+PVA E+G+RFAIREGG+TVGAGV+ +I++ Sbjct: 316 VYVLKKEEGGRHTPFFSGYRPQFYIRTTDVTGAIHL-----PEGVEMVMPGDNIEMTVELIVPVAIEEGLRFAIREGGRTVGAGVVSAIVD 401
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_CODFR (Elongation factor Tu, chloroplastic OS=Codium fragile GN=tufA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.805e-29 Identity = 61/92 (66.30%), Postives = 75/92 (81.52%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDE-ESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VY+LKKEEGGRH+ FFAGYRPQFY+RTTDVTG + + D + +MVMPGDR++M VELI P+A E MRFAIREGGKTVGAGV+ +I++ Sbjct: 318 VYILKKEEGGRHTSFFAGYRPQFYVRTTDVTGHIKTFQGKIDNTQIQMVMPGDRIQMEVELIRPIAIETRMRFAIREGGKTVGAGVVTTIVQ 409
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU2_ROSCS (Elongation factor Tu 2 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=tuf2 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.357e-29 Identity = 61/91 (67.03%), Postives = 76/91 (83.52%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFF GYRPQFY+RTTDVTG +S +MVMPGD ++M+VELI+PVA E+G+RFAIREGG+TVGAGV+ +I++ Sbjct: 316 VYVLKKEEGGRHTPFFPGYRPQFYIRTTDVTGAISLPAG-----VEMVMPGDNIEMLVELIVPVAIEEGLRFAIREGGRTVGAGVVSAIVD 401
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU1_ROSCS (Elongation factor Tu 1 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=tuf1 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.357e-29 Identity = 61/91 (67.03%), Postives = 76/91 (83.52%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFF GYRPQFY+RTTDVTG +S +MVMPGD ++M+VELI+PVA E+G+RFAIREGG+TVGAGV+ +I++ Sbjct: 316 VYVLKKEEGGRHTPFFPGYRPQFYIRTTDVTGAISLPAG-----VEMVMPGDNIEMLVELIVPVAIEEGLRFAIREGGRTVGAGVVSAIVD 401
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU2_ALKMQ (Elongation factor Tu 2 OS=Alkaliphilus metalliredigens (strain QYMF) GN=tuf2 PE=3 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 5.251e-29 Identity = 62/91 (68.13%), Postives = 72/91 (79.12%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD + M +ELI P+A E+G+RFAIREGG+TVGAGV+ SIIE Sbjct: 312 VYVLKKEEGGRHTPFFDGYRPQFYFRTTDVTGSIKL-----PEGVEMVMPGDNITMEIELISPIATEEGLRFAIREGGRTVGAGVVASIIE 397
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU1_ALKMQ (Elongation factor Tu 1 OS=Alkaliphilus metalliredigens (strain QYMF) GN=tuf1 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 5.251e-29 Identity = 62/91 (68.13%), Postives = 72/91 (79.12%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVLKKEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD + M +ELI P+A E+G+RFAIREGG+TVGAGV+ SIIE Sbjct: 312 VYVLKKEEGGRHTPFFDGYRPQFYFRTTDVTGSIKL-----PEGVEMVMPGDNITMEIELISPIATEEGLRFAIREGGRTVGAGVVASIIE 397
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU1_HALHL (Elongation factor Tu 1 OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=tuf1 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 6.859e-29 Identity = 62/91 (68.13%), Postives = 72/91 (79.12%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVL K+EGGRH+PFF GYRPQFY RTTDVTG V+ E ++MVMPGD VKM V+LI P+A E G+RFAIREGG+TVGAGV+ IIE Sbjct: 311 VYVLSKDEGGRHTPFFNGYRPQFYFRTTDVTGTVTL-----PEGTEMVMPGDNVKMTVQLIAPIAMEDGLRFAIREGGRTVGAGVVSKIIE 396
BLAST of DN617892 vs. ExPASy Swiss-Prot
Match: EFTU_VIBPA (Elongation factor Tu OS=Vibrio parahaemolyticus GN=tufA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.170e-28 Identity = 61/91 (67.03%), Postives = 72/91 (79.12%), Query Frame = -2 Query: 259 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 531 VYVL KEEGGRH+PFF GYRPQFY RTTDVTG +S E +MVMPGD ++MVVELI P+A ++G+RFAIREGG+TVGAGV+ I E Sbjct: 309 VYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGDISL-----PEGVEMVMPGDNIQMVVELIAPIAMDEGLRFAIREGGRTVGAGVVAKIFE 394 The following BLAST results are available for this feature:
BLAST of DN617892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617892 ID=DN617892; Name=DN617892; organism=Citrus sinensis; type=EST; length=535bpback to top |