DN617891
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB10_RAT (Proteasome subunit beta type-10 OS=Rattus norvegicus GN=Psmb10 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 9.550e-52 Identity = 97/168 (57.74%), Postives = 123/168 (73.21%), Query Frame = 3 Query: 33 VPSRGGFSFDLCRRNDMLAK--KGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAA 530 V RGGFSF+ C+RN L G+ +P RKTGTTI GL+F+DGVILGADTRAT +V DK+CEKIH++AP IYCCGAG AADTE T M +S+++LH TGRE RV T +L++ LF YQG+V A+L++GGVD GP L++++PHGS LPF +GSG AA Sbjct: 6 VEHRGGFSFENCQRNASLEHVLPGLRVPLARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLIVGGVDLNGPQLYSVHPHGSYSRLPFTALGSGQDAA 173
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB10_MOUSE (Proteasome subunit beta type-10 OS=Mus musculus GN=Psmb10 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 4.740e-51 Identity = 97/168 (57.74%), Postives = 121/168 (72.02%), Query Frame = 3 Query: 33 VPSRGGFSFDLCRRNDMLAK--KGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAA 530 V GGFSF+ C+RN L G+ +P RKTGTTI GL+F+DGVILGADTRAT +V DK+CEKIH++AP IYCCGAG AADTE T M +S+++LH TGRE RV T +L++ LF YQG+V A+LV+GGVD GP L+ ++PHGS LPF +GSG AA Sbjct: 6 VEPTGGFSFENCQRNASLEHVLPGLRVPHARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLVVGGVDLNGPQLYEVHPHGSYSRLPFTALGSGQGAA 173
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB10_BOVIN (Proteasome subunit beta type-10 OS=Bos taurus GN=PSMB10 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 4.740e-51 Identity = 97/163 (59.51%), Postives = 118/163 (72.39%), Query Frame = 3 Query: 48 GFSFDLCRRNDML--AKKGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAA 530 GFSF+ C RN L A G+ +P RKTGTTI GL+FQDGVILGADTRAT +V DK CEKIH++AP IYCCGAG AAD E T M +S ++LH TGRE RV T +L++ LF YQGYV A+L++GGVD TGP L++++PHGS LPF +GSG AA Sbjct: 11 GFSFENCERNAALQRALPGLRVPHARKTGTTIAGLVFQDGVILGADTRATNDSVVADKICEKIHFIAPKIYCCGAGVAADAEMTTRMAASNMELHALSTGRECRVATVTRMLRQTLFRYQGYVGASLIVGGVDFTGPQLYSVHPHGSYSRLPFTALGSGQDAA 173
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB7_YEAST (Proteasome component PUP1 OS=Saccharomyces cerevisiae GN=PUP1 PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 4.905e-48 Identity = 90/161 (55.90%), Postives = 120/161 (74.53%), Query Frame = 3 Query: 48 GFSFDLCRRNDMLAKKGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAA 530 G SFD +RN+ LA+ P TGTTIVG+ F +GV++ ADTR+T+GPIV DKNC K+H ++P I+C GAGTAADTEAVT ++ S ++LH +T RE RVV+AL +LK+HLF YQG++ A L++ GVD TG HL +I+ HGSTD + ++GSGSLAA Sbjct: 3 GLSFDNYQRNNFLAENSHTQPKATSTGTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGSTDVGYYLSLGSGSLAA 163
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB7_ENCCU (Probable proteasome subunit beta type-7 OS=Encephalitozoon cuniculi GN=PUP1 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 4.927e-32 Identity = 69/137 (50.36%), Postives = 91/137 (66.42%), Query Frame = 3 Query: 120 KTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAA 530 KTGTTIVG+ ++ GVIL ADTR+T+GP+V DKNC KIH + I CCGAGTAAD V M S +L+L + R V + +HL Y G + AAL++GG+D G HL+ I+PHGS ++ F ++GSGSL A Sbjct: 4 KTGTTIVGMKYKTGVILAADTRSTQGPVVSDKNCVKIHQITDKIMCCGAGTAADASRVARMASRELRLFQNKYLRLPLVSHFRKVCTQHLHKYGGGIGAALIVGGIDSEGCHLYEIHPHGSENSALFVSLGSGSLGA 140
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB6_SCHPO (Probable proteasome subunit beta type-6 OS=Schizosaccharomyces pombe GN=SPBC4C3.10c PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.160e-19 Identity = 50/135 (37.04%), Postives = 78/135 (57.78%), Query Frame = 3 Query: 120 KTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD-CTGPHLHTIYPHGSTDTLPFATMGSGS 521 + GTTI L ++DGVIL AD+R T G + ++ +K+ + NI+CC +G+AADT+ V D++ L ++R G + V TA TL + + + + A L++ G D TG +++I GS P A GSGS Sbjct: 22 RMGTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVADLLKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNMLSAGLIVAGYDEKTGGDVYSIPLGGSLHKQPLAIGGSGS 156
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB9_SALSA (Proteasome subunit beta type-9 OS=Salmo salar GN=psmb9-a PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.374e-18 Identity = 48/134 (35.82%), Postives = 76/134 (56.72%), Query Frame = 3 Query: 120 KTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGS 521 KTGTTI+ + F GV+LG+D+R + G V ++ K+ + IYC +G+AAD + + +MV+ QL +H G + +V +A TL+K + Y+ + A L++ G D G + +G PFA GSGS Sbjct: 16 KTGTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGGGQVYVTLNGLLSRQPFAVGGSGS 149
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB9_ONCMY (Proteasome subunit beta type-9 OS=Oncorhynchus mykiss GN=psmb9 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.101e-18 Identity = 48/134 (35.82%), Postives = 76/134 (56.72%), Query Frame = 3 Query: 120 KTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGS 521 KTGTTI+ + F GV+LG+D+R + G V ++ K+ + IYC +G+AAD + + +MV+ QL +H G + +V +A TL+K + Y+ + A L++ G D G + +G PFA GSGS Sbjct: 16 KTGTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEDLSAHLIVAGWDKRGGGQVYVTLNGLLSRQPFAVGGSGS 149
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB6_ARATH (Proteasome subunit beta type-6 OS=Arabidopsis thaliana GN=PBA1 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.178e-17 Identity = 49/142 (34.51%), Postives = 80/142 (56.34%), Query Frame = 3 Query: 99 VNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD-CTGPHLHTIYPHGSTDTLPFATMGSGS 521 +NL + GTTI+G+ + GV+LGAD+R + G V ++ +KI + N+Y C +G+AAD++ V+D V L H G+ + V + L++ +N + +Q L++GG D G ++ I G+ PFA GSGS Sbjct: 3 LNLDAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKYEGGKIYGIPLGGTVVEQPFAIGGSGS 144
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB6_BOVIN (Proteasome subunit beta type-6 OS=Bos taurus GN=PSMB6 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.539e-17 Identity = 49/134 (36.57%), Postives = 76/134 (56.72%), Query Frame = 3 Query: 123 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD-CTGPHLHTIYPHGSTDTLPFATMGSGS 521 TGTTI+ + F GV+LGAD+R T G + ++ +K+ + I+CC +G+AADT+AV D V+ QL H V TA +L K+ + Y+ + A +++ G D G ++++ G PFA GSGS Sbjct: 33 TGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQPFAIGGSGS 166 The following BLAST results are available for this feature:
BLAST of DN617891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617891 ID=DN617891; Name=DN617891; organism=Citrus sinensis; type=EST; length=532bpback to top |