DN617891
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB6_TOBAC (Proteasome subunit beta type-6 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.010e-17 Identity = 48/133 (36.09%), Postives = 76/133 (57.14%), Query Frame = 3 Query: 126 GTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD-CTGPHLHTIYPHGSTDTLPFATMGSGS 521 GTTI+G+ + GV+LGAD+R + G V ++ +KI + N+Y C +G+AAD++ V+D V L H G+ + V A L + +N + +Q +++GG D G ++ I P G+ PFA GSGS Sbjct: 13 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLTRLLSYNNKDRLQTGMIIGGWDKYEGGKIYGIPPGGTVLEQPFAIGGSGS 145
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB6_YEAST (Proteasome component PRE3 OS=Saccharomyces cerevisiae GN=PRE3 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 5.848e-17 Identity = 48/133 (36.09%), Postives = 79/133 (59.40%), Query Frame = 3 Query: 126 GTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGP-HLHTIYPHGSTDTLPFATMGSGS 521 GT+I+ + F+DGVILGAD+R T G + ++ +K+ + I+CC +G+AADT+A+ D+V L+L+ G S TA ++ K+ + + + A +++ G D ++TI GS LP+A GSGS Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPS-TETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGS 150
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB6_RAT (Proteasome subunit beta type-6 OS=Rattus norvegicus GN=Psmb6 PE=1 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 9.975e-17 Identity = 48/134 (35.82%), Postives = 76/134 (56.72%), Query Frame = 3 Query: 123 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD-CTGPHLHTIYPHGSTDTLPFATMGSGS 521 TGTTI+ + F GV+LGAD+R T G + ++ +K+ + +I+CC +G+AADT+AV D V+ QL H V TA +L K+ + Y+ + A +++ G D G ++++ G FA GSGS Sbjct: 32 TGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGS 165
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB6_MOUSE (Proteasome subunit beta type-6 OS=Mus musculus GN=Psmb6 PE=1 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 9.975e-17 Identity = 48/134 (35.82%), Postives = 76/134 (56.72%), Query Frame = 3 Query: 123 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD-CTGPHLHTIYPHGSTDTLPFATMGSGS 521 TGTTI+ + F GV+LGAD+R T G + ++ +K+ + +I+CC +G+AADT+AV D V+ QL H V TA +L K+ + Y+ + A +++ G D G ++++ G FA GSGS Sbjct: 32 TGTTIMAVQFNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGS 165
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB6_HUMAN (Proteasome subunit beta type-6 OS=Homo sapiens GN=PSMB6 PE=1 SV=4) HSP 1 Score: 85.8853 bits (211), Expect = 1.303e-16 Identity = 48/134 (35.82%), Postives = 75/134 (55.97%), Query Frame = 3 Query: 123 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD-CTGPHLHTIYPHGSTDTLPFATMGSGS 521 TGTTI+ + F GV+LGAD+R T G + ++ +K+ + I+CC +G+AADT+AV D V+ QL H V TA +L K+ + Y+ + A +++ G D G ++++ G FA GSGS Sbjct: 33 TGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGS 166
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB9_ORYLA (Proteasome subunit beta type-9 OS=Oryzias latipes GN=psmb9 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.209e-15 Identity = 46/134 (34.33%), Postives = 72/134 (53.73%), Query Frame = 3 Query: 120 KTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGS 521 KTGTTI+ + F GV+LG+D+R + G V ++ K+ + IYC +G+AAD + + +MV+ QL +H + +V +A TL+K + Y+ + A L++ G D G PFA GSGS Sbjct: 16 KTGTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPLHDKIYCALSGSAADAQTIAEMVNYQLDVHSLEIDEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDRRDGGQVFATLGGLLTRQPFAIGGSGS 149
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB6_DICDI (Proteasome subunit beta type-6 OS=Dictyostelium discoideum GN=psmB6 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.209e-15 Identity = 47/133 (35.34%), Postives = 75/133 (56.39%), Query Frame = 3 Query: 126 GTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD-CTGPHLHTIYPHGSTDTLPFATMGSGS 521 GT+I+ + + GVI+GAD+R T G + ++ KI + IYCC +G+AADT+A++D V L++H E V TA +L + ++ + + A +++ G D G ++ I GS PFA GSGS Sbjct: 14 GTSIMAVEYDGGVIMGADSRTTTGAYIANRVTNKITPIHERIYCCRSGSAADTQAISDYVRYYLEMHTSELCDEPDVKTAASLFQLLCYSNKNNLMAGIIVAGWDKHQGGSVYNISLGGSMVKQPFAIGGSGS 146
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PB6LB_SALSA (Proteasome subunit beta type-6-B like protein OS=Salmo salar GN=psmb6l-b PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.592e-14 Identity = 48/135 (35.56%), Postives = 71/135 (52.59%), Query Frame = 3 Query: 123 TGTTIVGLIFQDGVILGADTRAT-EGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD-CTGPHLHTIYPHGSTDTLPFATMGSGS 521 TGTTI+ + F GVI+G+D+RA+ G V K K+ + I+CC AG+ AD +AVT Q+ H V A ++LK+ +N + +QA + G D GP ++T+ G + PF GSGS Sbjct: 15 TGTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVALGGMLLSQPFTIGGSGS 149
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PB6LA_SALSA (Proteasome subunit beta type-6-A like protein OS=Salmo salar GN=psmb6l-a PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.592e-14 Identity = 48/135 (35.56%), Postives = 71/135 (52.59%), Query Frame = 3 Query: 123 TGTTIVGLIFQDGVILGADTRAT-EGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD-CTGPHLHTIYPHGSTDTLPFATMGSGS 521 TGTTI+ + F GVI+G+D+RA+ G V K K+ + I+CC AG+ AD +AVT Q+ H V A ++LK+ +N + +QA + G D GP ++T+ G + PF GSGS Sbjct: 15 TGTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVALGGMLLSQPFTIGGSGS 149
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB9_HUMAN (Proteasome subunit beta type-9 OS=Homo sapiens GN=PSMB9 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 3.922e-13 Identity = 46/135 (34.07%), Postives = 73/135 (54.07%), Query Frame = 3 Query: 123 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCT--GPHLHTIYPHGSTDTLPFATMGSGS 521 TGTTI+ + F GV++G+D+R + G V ++ +K+ + IYC +G+AAD +AV DM + QL+LH V+ A +++ + Y+ + A L++ G D G T+ G PFA GSGS Sbjct: 19 TGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGTL--GGMLTRQPFAIGGSGS 151 The following BLAST results are available for this feature:
BLAST of DN617891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617891 ID=DN617891; Name=DN617891; organism=Citrus sinensis; type=EST; length=532bpback to top |