DN617891
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB9_BOVIN (Proteasome subunit beta type-9 OS=Bos taurus GN=PSMB9 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.691e-13 Identity = 43/133 (32.33%), Postives = 71/133 (53.38%), Query Frame = 3 Query: 123 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGS 521 TGTTI+ + F GV++G+D+R + G V ++ +K+ + +IYC +G+AAD +A+ DM + QL+LH V+ A +++ + Y+ + A L++ G D G PFA GSGS Sbjct: 19 TGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQHIYCALSGSAADAQAIADMAAYQLELHGMELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQREGGQVYGTMSGMLIRQPFAIGGSGS 151
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB9_RAT (Proteasome subunit beta type-9 OS=Rattus norvegicus GN=Psmb9 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 8.738e-13 Identity = 45/134 (33.58%), Postives = 73/134 (54.48%), Query Frame = 3 Query: 123 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD-CTGPHLHTIYPHGSTDTLPFATMGSGS 521 TGTTI+ + F GV++G+D+R + G V ++ +K+ + IYC +G+AAD +A+ DM + QL+LH V+ A ++K + Y+ + A L++ G D G ++ G PFA GSGS Sbjct: 19 TGTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANIVKNISYKYREDLLAHLMVAGWDQHEGGQVYGTM-GGMLIRQPFAIGGSGS 151
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB9_MUSMB (Proteasome subunit beta type-9 OS=Mus musculus bactrianus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.321e-12 Identity = 42/133 (31.58%), Postives = 69/133 (51.88%), Query Frame = 3 Query: 123 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGS 521 TGTTI+ + F GV++G+D+R + G V ++ +K+ + I+C +G+AAD +A+ DM + QL+LH V+ A ++K + Y+ + A L++ G D G PF GSGS Sbjct: 19 TGTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGTMGGMLIRQPFTISGSGS 151
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB9_MUSSI (Proteasome subunit beta type-9 OS=Mus spicilegus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.664e-12 Identity = 35/106 (33.02%), Postives = 62/106 (58.49%), Query Frame = 3 Query: 123 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD 440 TGTTI+ + F GV++G+D+R + G V ++ +K+ + I+C +G+AAD +A+ DM + QL+LH V+ A ++K + Y+ + A L++ G D Sbjct: 19 TGTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWD 124
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB9_MUSPL (Proteasome subunit beta type-9 OS=Mus platythrix GN=Psmb9 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.664e-12 Identity = 35/106 (33.02%), Postives = 62/106 (58.49%), Query Frame = 3 Query: 123 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD 440 TGTTI+ + F GV++G+D+R + G V ++ +K+ + I+C +G+AAD +A+ DM + QL+LH V+ A ++K + Y+ + A L++ G D Sbjct: 19 TGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWD 124
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB9_MUSDU (Proteasome subunit beta type-9 OS=Mus dunni GN=Psmb9 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.664e-12 Identity = 35/106 (33.02%), Postives = 62/106 (58.49%), Query Frame = 3 Query: 123 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD 440 TGTTI+ + F GV++G+D+R + G V ++ +K+ + I+C +G+AAD +A+ DM + QL+LH V+ A ++K + Y+ + A L++ G D Sbjct: 19 TGTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWD 124
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSB9_MOUSE (Proteasome subunit beta type-9 OS=Mus musculus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.664e-12 Identity = 35/106 (33.02%), Postives = 62/106 (58.49%), Query Frame = 3 Query: 123 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVD 440 TGTTI+ + F GV++G+D+R + G V ++ +K+ + I+C +G+AAD +A+ DM + QL+LH V+ A ++K + Y+ + A L++ G D Sbjct: 19 TGTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWD 124
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSMB_ARCFU (Proteasome subunit beta OS=Archaeoglobus fulgidus GN=psmB PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.262e-11 Identity = 41/137 (29.93%), Postives = 70/137 (51.09%), Query Frame = 3 Query: 126 GTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY-VQAALVLGGVDCTGPHLHTIYP-HGSTDTLPFATMGSGSLAA 530 GTT VGL+ +DGV++ + RAT G + K +KI+ +A + AG+ D + + ++ + L+ R+ V TL L +Y+ + L++GG+D G +++I P G+ + GSGSL A Sbjct: 11 GTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIYSIDPIGGAIEEKDIVATGSGSLTA 147
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSMB_PYRFU (Proteasome subunit beta OS=Pyrococcus furiosus GN=psmB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.795e-11 Identity = 46/136 (33.82%), Postives = 69/136 (50.74%), Query Frame = 3 Query: 126 GTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHL-----FNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSG 518 GTT VGL+ ++GV+L ADTRA+ G I+ KN KIH + ++ GAG D + ++ ++ L++ G+E V TLL L F Y G+ ++GG D P L ++ G +A GSG Sbjct: 10 GTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGW----FLVGGYD-EKPRLFSVDMVGGITEDNYAAAGSG 140
BLAST of DN617891 vs. ExPASy Swiss-Prot
Match: PSMB_METTE (Proteasome subunit beta OS=Methanosarcina thermophila GN=psmB PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.262e-11 Identity = 39/135 (28.89%), Postives = 71/135 (52.59%), Query Frame = 3 Query: 126 GTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY--VQAALVLGGVDCTGPHLHTI-YPHGSTDTLPFATMGSGS 521 GTT VG++ DG++L ++ RAT G + K +K++ + + AG+ D + + +VS + QL++ ES + +T L + + Y + L++GGVD GP ++++ GS + + GSGS Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRD-ESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGVDKNGPGIYSLDAMGGSIEETRISATGSGS 142 The following BLAST results are available for this feature:
BLAST of DN617891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617891 ID=DN617891; Name=DN617891; organism=Citrus sinensis; type=EST; length=532bpback to top |