DN617887

Overview
NameDN617887
Unique NameDN617887
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_DROSE (WD repeat-containing protein 48 homolog OS=Drosophila sechellia GN=GM20456 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.167e-18
Identity = 55/155 (35.48%), Postives = 85/155 (54.84%), Query Frame = 3 
Query:  171 RKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629
            RK+ ++++V+ ++++ +H  G+N L +     +NG   L++  RD  ++ W+   D       + E H DWVND VL      L+S S DTT+K WN    G C+ TLR H DYV  LA A K+   VAS GL   +F+WD+    A + S + +
Sbjct:   10 RKKMQVSFVIRDAEEKQHRNGVNALQL---DANNGK--LYSAGRDAIIRVWNTRTDSSEKYIQSMEHHNDWVNDIVLCCNGRNLISASCDTTVKVWNAQK-GFCMSTLRTHRDYVQALAYA-KDREQVASAGLDKAIFLWDVNTLTALTASNNTV 157
[Close]
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_DROME (WD repeat-containing protein 48 homolog OS=Drosophila melanogaster GN=CG9062 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.167e-18
Identity = 55/155 (35.48%), Postives = 85/155 (54.84%), Query Frame = 3 
Query:  171 RKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629
            RK+ ++++V+ ++++ +H  G+N L +     +NG   L++  RD  ++ W+   D       + E H DWVND VL      L+S S DTT+K WN    G C+ TLR H DYV  LA A K+   VAS GL   +F+WD+    A + S + +
Sbjct:   10 RKKMQVSFVIRDAEEKQHRNGVNALQL---DANNGK--LYSAGRDAIIRVWNTRTDSSEKYIQSMEHHNDWVNDIVLCCNGRNLISASCDTTVKVWNAQK-GFCMSTLRTHRDYVQALAYA-KDREQVASAGLDKAIFLWDVNTLTALTASNNTV 157
[Close]
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_DROER (WD repeat-containing protein 48 homolog OS=Drosophila erecta GN=GG22678 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.167e-18
Identity = 55/155 (35.48%), Postives = 85/155 (54.84%), Query Frame = 3 
Query:  171 RKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629
            RK+ ++++V+ ++++ +H  G+N L +     +NG   L++  RD  ++ W+   D       + E H DWVND VL      L+S S DTT+K WN    G C+ TLR H DYV  LA A K+   VAS GL   +F+WD+    A + S + +
Sbjct:   10 RKKMQVSFVIRDAEEKQHRNGVNALQL---DANNGK--LYSAGRDAIIRVWNTRTDSSEKYIQSMEHHNDWVNDIVLCCNGRNLISASCDTTVKVWNAQK-GFCMSTLRTHRDYVQALAYA-KDREQVASAGLDKAIFLWDVNTLTALTASNNTV 157
[Close]
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_AEDAE (WD repeat-containing protein 48 homolog OS=Aedes aegypti GN=AAEL012158 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.524e-18
Identity = 57/161 (35.40%), Postives = 87/161 (54.04%), Query Frame = 3 
Query:  156 NSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS--CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629
            N+   RK+ ++++V+ ++++ +H  G+N L +      NG   L++  RD  ++ W+   +        + E H DWVND VL  G   L+S S DTT+K WN    G C+ TLR H DYV  LA A K+   VAS GL   +F+WDI    A + S + +
Sbjct:    6 NNQGGRKKMQVSFVIRDAEEKRHRNGVNALQL---DTING--RLYSAGRDAIIRVWNSMQNNSQEPYIQSMEHHNDWVNDIVLCCGGRNLISASCDTTVKVWNAHK-GFCMSTLRTHRDYVQALAYA-KDREQVASAGLDKAIFLWDINTLTALTASNNTV 159
[Close]
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_DROAN (WD repeat-containing protein 48 homolog OS=Drosophila ananassae GN=GF12420 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.395e-18
Identity = 54/155 (34.84%), Postives = 85/155 (54.84%), Query Frame = 3 
Query:  171 RKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629
            RK+ ++++V+ ++++ +H  G+N L +     +NG   L++  RD  ++ W+   +       + E H DWVND VL      L+S S DTT+K WN    G C+ TLR H DYV  LA A K+   VAS GL   +F+WD+    A + S + +
Sbjct:   10 RKKMQVSFVIRDAEEKQHRNGVNALQL---DANNGK--LYSAGRDAIIRVWNTRTESNEKYIQSMEHHNDWVNDIVLCCNGRNLISASCDTTVKVWNAQK-GFCMSTLRTHRDYVQALAYA-KDREQVASAGLDKAIFLWDVNTLTALTASNNTV 157
[Close]
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_DROMO (WD repeat-containing protein 48 homolog OS=Drosophila mojavensis GN=GI19644 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.434e-18
Identity = 54/155 (34.84%), Postives = 85/155 (54.84%), Query Frame = 3 
Query:  171 RKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629
            RK+ ++++V+ ++++ +H  G+N L +     +NG   L++  RD  ++ W+   +       + E H DWVND VL      L+S S DTT+K WN    G C+ TLR H DYV  LA A K+   VAS GL   +F+WD+    A + S + +
Sbjct:   10 RKKMQVSFVIRDAEEKQHRNGVNALQL---DSNNGK--LYSAGRDAIIRVWNTRTEANEKYIQSMEHHNDWVNDIVLCCNGRNLISASCDTTVKVWNAHK-GFCMSTLRTHRDYVQALAYA-KDREQVASAGLDKAIFLWDVNTLTALTASNNTV 157
[Close]
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_DROPS (WD repeat-containing protein 48 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA21511 PE=3 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 5.791e-18
Identity = 54/155 (34.84%), Postives = 85/155 (54.84%), Query Frame = 3 
Query:  171 RKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629
            RK+ ++++V+ ++++ +H  G+N L +     +NG   L++  RD  ++ W+   +       + E H DWVND VL      L+S S DTT+K WN    G C+ TLR H DYV  LA A K+   VAS GL   +F+WD+    A + S + +
Sbjct:   10 RKKMQVSFVIRDAEEKQHRNGVNSLQL---DPNNGK--LYSAGRDAIIRVWNTRSESSEKYIQSMEHHNDWVNDIVLCCNGRNLISASCDTTVKVWNAQK-GFCMSTLRTHRDYVQALAYA-KDREQVASAGLDKAIFLWDVNTLTALTASNNTV 157
[Close]
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_DROPE (WD repeat-containing protein 48 homolog OS=Drosophila persimilis GN=GL16745 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.791e-18
Identity = 54/155 (34.84%), Postives = 85/155 (54.84%), Query Frame = 3 
Query:  171 RKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629
            RK+ ++++V+ ++++ +H  G+N L +     +NG   L++  RD  ++ W+   +       + E H DWVND VL      L+S S DTT+K WN    G C+ TLR H DYV  LA A K+   VAS GL   +F+WD+    A + S + +
Sbjct:   10 RKKMQVSFVIRDAEEKQHRNGVNSLQL---DPNNGK--LYSAGRDAIIRVWNTRSESSEKYIQSMEHHNDWVNDIVLCCNGRNLISASCDTTVKVWNAQK-GFCMSTLRTHRDYVQALAYA-KDREQVASAGLDKAIFLWDVNTLTALTASNNTV 157
[Close]
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_DROVI (WD repeat-containing protein 48 homolog OS=Drosophila virilis GN=GJ15009 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.563e-18
Identity = 54/155 (34.84%), Postives = 85/155 (54.84%), Query Frame = 3 
Query:  171 RKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629
            RK+ ++++V+ ++++ +H  G+N L +     +NG   L++  RD  ++ W+   +       + E H DWVND VL      L+S S DTT+K WN    G C+ TLR H DYV  LA A K+   VAS GL   +F+WD+    A + S + +
Sbjct:   10 RKKMQVSFVIRDAEEKQHRNGVNALQL---DSNNGK--LYSAGRDAIIRVWNTRTESNDKYIQSMEHHNDWVNDIVLCCNGRNLISASCDTTVKVWNAHK-GFCMSTLRTHRDYVQALAYA-KDREQVASAGLDKAIFLWDVNTLTALTASNNTV 157
[Close]
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_DROGR (WD repeat-containing protein 48 homolog OS=Drosophila grimshawi GN=GH21936 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.563e-18
Identity = 54/155 (34.84%), Postives = 85/155 (54.84%), Query Frame = 3 
Query:  171 RKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS-CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629
            RK+ ++++V+ ++++ +H  G+N L +     +NG   L++  RD  ++ W+   +       + E H DWVND VL      L+S S DTT+K WN    G C+ TLR H DYV  LA A K+   VAS GL   +F+WD+    A + S + +
Sbjct:   10 RKKMQVSFVIRDAEEKQHRNGVNALQL---DPNNGK--LYSAGRDAIIRVWNTRTESNEKYIQSMEHHNDWVNDIVLCCNGRNLISASCDTTVKVWNAHK-GFCMSTLRTHRDYVQALAYA-KDREQVASAGLDKAIFLWDVNTLTALTASNNTV 157
The following BLAST results are available for this feature:
BLAST of DN617887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
WDR48_DROSE1.167e-1835.48WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WDR48_DROME1.167e-1835.48WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WDR48_DROER1.167e-1835.48WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WDR48_AEDAE1.524e-1835.40WD repeat-containing protein 48 homolog OS=Aedes a... [more]
WDR48_DROAN3.395e-1834.84WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WDR48_DROMO4.434e-1834.84WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WDR48_DROPS5.791e-1834.84WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WDR48_DROPE5.791e-1834.84WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WDR48_DROVI7.563e-1834.84WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WDR48_DROGR7.563e-1834.84WD repeat-containing protein 48 homolog OS=Drosoph... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01N04_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001N04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617887 ID=DN617887; Name=DN617887; organism=Citrus sinensis; type=EST; length=630bp
ATTTTCTTCATTAATTAAAAAAATTCCCAGTCTCTTCTCCATTTTCTTTT
TTGAAACAAAATTCTTAGGGTTTACTTCAATTTCTCCTTCGATTGATTTC
TTAAACTACTGGGGTTGTTGCAATGCACCGCGTGGGTAGTGCGGGTAACA
ATGCCAATTCTACTCGCCCCCGTAAAGAGAAGAGGTTGACATATGTGTTG
AATAATTCTGATGACACCAAGCATTGTGCTGGCATAAATTGTTTGGCTGT
ATTGAAGTCATCTGTATCCAATGGGGTTGATTACCTGTTCACTGGCAGTC
GTGATGGCACATTAAAGAGATGGTCACTTGCTGATGATGTTGGAAGTTGC
TCTGCAACATTTGAGTCGCATGTTGACTGGGTAAATGACGCTGTCCTTGT
AGGTGATAATACTCTTGTTTCCTGCTCTTCAGACACCACCCTCAAGACAT
GGAATTGCTCGTCTGATGGAACTTGTATAAGGACTCTCCGTCAGCACTCT
GACTATGTTACTTGTCTCGCTGCAGCAGAAAAAAATAGCAATATTGTTGC
ATCTGGTGGTCTTGGTGCGGAGGTTTTCATATGGGATATAGAAGCTGCCC
TTGCTCCATCGAAATCAGGTGATGCCATGG
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