DN617887
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_DICDI (WD repeat-containing protein 48 homolog OS=Dictyostelium discoideum GN=DDB_G0277533 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.200e-17 Identity = 56/158 (35.44%), Postives = 82/158 (51.90%), Query Frame = 3 Query: 165 RPRKEKRLTYVLNNSDDT----KHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLA-----DDVGSCSA-------TFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI 590 +P K K V N ++T +HC G+N LA ++ L++ RD T+K + + +D+ + +F H DWVND N LVSCSSD+T+K WN S+ C+ +L+ H DYV LA A K +N AS GL + + IWD+ Sbjct: 130 KPPKFKISYSVKNTLNNTIIPDRHCFGVNSLAY-----NHRKSILYSAGRDSTIKSYQIGGGDNDNDINEKNEYGFKFKKSFNDHTDWVNDLFFNDSNILVSCSSDSTIKIWNTDSE-RCVNSLKFHDDYVKVLAYAPK-ANYFASSGLDSHIKIWDL 280
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: YA4E_SCHPO (Uncharacterized WD repeat-containing protein C31A2.14 OS=Schizosaccharomyces pombe GN=SPAC31A2.14 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.902e-17 Identity = 53/150 (35.33%), Postives = 82/150 (54.67%), Query Frame = 3 Query: 171 RKEKRLTYVLNN-SDDTKHCAGINCLAVLKSSVSNG----VDYLFTGSRDGTLKRWSLADDVGSCS---ATFESHVDWVNDAVLVGDNT-LVSCSSDTTLKTWNCS-SDGTCIRTLRQHSDYVTCLAAAE-KNSNIVASGGLGAEVFIWD 587 RK ++TYVL++ +D H NCL + + G L++G RDG L W + D G S A ++H WVND L D+ ++SCSSD+T+K W + +C+ T+ +H+DYV ++ + S +VASGGL + +WD Sbjct: 4 RKRYKVTYVLDSCNDQLGHRLDANCLVLGRYFSEQGSAPVTRALYSGGRDGQLFGWDIGYDYGKASQPLAKIQAHSAWVNDIALTHDSEGVISCSSDSTVKLWKPHVLNASCLSTIGEHTDYVKRVSIPKYSKSPLVASGGLDKRIIVWD 153
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_CULQU (WD repeat-containing protein 48 homolog OS=Culex quinquefasciatus GN=CpipJ_CPIJ014111 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 53/151 (35.10%), Postives = 80/151 (52.98%), Query Frame = 3 Query: 186 LTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGS--CSATFESHVDWVNDAVLV-GDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEAALAPSKSGDAM 629 +++V+ ++++ +H G+N L + NG L++ RD ++ W+ + E H DWVND VL G L+S S DTT+K WN G C+ TLR H DYV LA A K+ VAS GL +F+WD+ A + S + + Sbjct: 2 VSFVIRDAEEKRHRNGVNALQL---DPVNG--RLYSAGRDAIIRVWNSTQTSSQEPYIQSMEHHNDWVNDIVLCCGGRNLISASCDTTVKVWNAHK-GFCMSTLRTHRDYVQALAYA-KDREQVASAGLDKAIFLWDVNTLTALTASNNTV 145
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_BRUMA (WD repeat-containing protein 48 homolog OS=Brugia malayi GN=Bm1_41555 PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.433e-16 Identity = 54/157 (34.39%), Postives = 80/157 (50.96%), Query Frame = 3 Query: 171 RKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLAD---DVGSCSA--------------TFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDI 590 +K+ ++++V+ + + H +G+NCL LF+G D ++ W D D GS + + E H DWVND VL ++S SSDTT+K WN G C+ TLR H DYV LA A ++ +VASGG +++WDI Sbjct: 7 KKKVQVSFVIRDEKEPMHRSGVNCL-----QYDAQTGRLFSGGSDTIIRIWKSPDRKDDSGSSYSVGGKTRVRRDLHLQSMEHHTDWVNDIVLCCG--VISASSDTTVKVWNAQK-GFCMSTLRTHRDYVRALAYA-RDVEMVASGGFDQLIYLWDI 154
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_CAEEL (WD repeat-containing protein 48 homolog OS=Caenorhabditis elegans GN=F35G12.4 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 5.609e-13 Identity = 51/170 (30.00%), Postives = 81/170 (47.65%), Query Frame = 3 Query: 156 NSTRPRKEKRLTYVLNNSDDTKHCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSA-----------------TFESHVDWVNDAVLVG-DNTLVSCSSDTTLKTWNCSSDG-----TCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA 596 N+++ +K++++++ + + + + ++ L + NG LFTG D ++ WS+ + SA + E H DWVND +L G L+S S+DTT+K WN D CIRT H DYV+CLA A V S +F++DI A Sbjct: 6 NTSQTGPKKKISFIIRDEHEYSNRSAVSAL---QYDAQNG--RLFTGGSDTIIRTWSVPHHKDAFSARGGVRSPGKNSPVQYQGSLEQHTDWVNDMILCGHGKILISASNDTTVKVWNIERDNKHGFIDCIRT---HKDYVSCLAYAPIVEKAV-SASFDHNIFVYDINA 166
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: NUDF_ASPOR (Nuclear distribution protein nudF homolog OS=Aspergillus oryzae GN=nudF PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.249e-12 Identity = 41/107 (38.32%), Postives = 55/107 (51.40%), Query Frame = 3 Query: 255 KSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVL-VGDNTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAE 572 + S +NG D++ TGSRD T+K W D G+C T H WV V G L+S S D TL+ W+ + G C++TL H +VT L A + V G AE Sbjct: 315 RPSSTNGADFMATGSRDNTIKIW---DSRGTCLMTLVGHDSWVQALVFHPGGKYLLSVSDDKTLRCWDLNQQGKCVKTLDAHESFVTSLRWAPGVAKNVPGGDGAAE 418
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR48_CAEBR (WD repeat-containing protein 48 homolog OS=Caenorhabditis briggsae GN=CBG18038 PE=3 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 2.784e-12 Identity = 48/170 (28.24%), Postives = 82/170 (48.24%), Query Frame = 3 Query: 153 ANSTRPRKEKRLTYVLNNSDDTKHCAGINCLA--VLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSA-----------------TFESHVDWVNDAVLVGD-NTLVSCSSDTTLKTWNCSSDGT--CIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIEA 596 +N+++ +K+L++++ + + H + ++ L L S LFTG D ++ WS+ + SA + E H DWV D VL G+ LVS S+DTT+K W+ D + +L H+DYV+CLA A +V S +F++D+ + Sbjct: 5 SNTSQSGSKKKLSFIIRDEQEPLHRSAVSALQYDALHSR-------LFTGGSDTIIRTWSVPQHKDAFSARGGVRSAGKNSPVQYQSSLERHTDWVTDMVLCGNGKLLVSSSNDTTVKVWSIERDNKHGYLDSLNLHTDYVSCLAYAPLAEKVV-SASFDRNIFVYDVNS 166
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: LIS1_DICDI (Lissencephaly-1 homolog OS=Dictyostelium discoideum GN=lis1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.356e-11 Identity = 40/106 (37.74%), Postives = 53/106 (50.00%), Query Frame = 3 Query: 222 HCAGINCLAVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGDNTLV-SCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKN 536 H ++C+ S D L + SRD T+K W A G C T H DWV + D + + SCS+D T+KTWN G C+ T R+HS V CLA + N Sbjct: 189 HDHNVSCVRFTPSG-----DQLISSSRDKTIKVWEAA--TGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVK-GECLATYREHSHVVECLAFSTAN 286
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR5_XENTR (WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.250e-11 Identity = 43/117 (36.75%), Postives = 58/117 (49.57%), Query Frame = 3 Query: 246 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGD-NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 593 AV S ++L + S D +K W D G T H ++D D N LVS S D TLK W+ SS G C++TL+ HS+YV C SN++ SG V IWD++ Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYD--GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS-GKCLKTLKGHSNYVFC-CNFNPQSNLIVSGSFDESVRIWDVK 159
BLAST of DN617887 vs. ExPASy Swiss-Prot
Match: WDR5_RAT (WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.250e-11 Identity = 43/117 (36.75%), Postives = 58/117 (49.57%), Query Frame = 3 Query: 246 AVLKSSVSNGVDYLFTGSRDGTLKRWSLADDVGSCSATFESHVDWVNDAVLVGD-NTLVSCSSDTTLKTWNCSSDGTCIRTLRQHSDYVTCLAAAEKNSNIVASGGLGAEVFIWDIE 593 AV S ++L + S D +K W D G T H ++D D N LVS S D TLK W+ SS G C++TL+ HS+YV C SN++ SG V IWD++ Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYD--GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS-GKCLKTLKGHSNYVFC-CNFNPQSNLIVSGSFDESVRIWDVK 159 The following BLAST results are available for this feature:
BLAST of DN617887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617887 ID=DN617887; Name=DN617887; organism=Citrus sinensis; type=EST; length=630bpback to top |