DN617885
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617885 vs. ExPASy Swiss-Prot
Match: SFRS1_CHICK (Splicing factor, arginine/serine-rich 1 OS=Gallus gallus GN=SFRS1 PE=1 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 2.301e-14 Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 2 Query: 68 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 268 R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G D DG R+ VEF Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
BLAST of DN617885 vs. ExPASy Swiss-Prot
Match: SFRS1_BOVIN (Splicing factor, arginine/serine-rich 1 OS=Bos taurus GN=SFRS1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.301e-14 Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 2 Query: 68 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 268 R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G D DG R+ VEF Sbjct: 17 RIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
BLAST of DN617885 vs. ExPASy Swiss-Prot
Match: SFRS9_MOUSE (Splicing factor, arginine/serine-rich 9 OS=Mus musculus GN=Sfrs9 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.005e-14 Identity = 45/100 (45.00%), Postives = 56/100 (56.00%), Query Frame = 2 Query: 59 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAXXXXXXXXXSREYLGRGPPPGSGR 343 G R+YVG L S R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y NG D R+ VEF R Y GRG P R Sbjct: 13 GDGRIYVGNLPSDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEF----------PRTYGGRGGWPRGAR 102
BLAST of DN617885 vs. ExPASy Swiss-Prot
Match: SFR1B_DANRE (Splicing factor, arginine/serine-rich 1B OS=Danio rerio GN=sfrs1b PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.005e-14 Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 2 Query: 68 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEF 268 R+YVG L R++D+E++F +YG IRD+D+K FAFVEF DPRDA+DA Y +G D DG R+ VEF Sbjct: 16 RIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 87
BLAST of DN617885 vs. ExPASy Swiss-Prot
Match: SFRS9_RAT (Splicing factor, arginine/serine-rich 9 OS=Rattus norvegicus GN=Sfrs9 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.125e-14 Identity = 44/100 (44.00%), Postives = 57/100 (57.00%), Query Frame = 2 Query: 59 GGTRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKR-----DFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAXXXXXXXXXSREYLGRGPPPGSGR 343 G R+YVG L + R +DLE++F +YGRIR++++K FAFV F DPRDA+DA Y NG D R+ VEF R Y GRG P + R Sbjct: 12 GDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEF----------PRAYGGRGGWPRASR 101
BLAST of DN617885 vs. ExPASy Swiss-Prot
Match: LARK_DROME (RNA-binding protein lark OS=Drosophila melanogaster GN=lark PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.665e-13 Identity = 36/110 (32.73%), Postives = 58/110 (52.73%), Query Frame = 2 Query: 65 TRLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAXXXXXXXXXSREYLGRGPPPGSG---RCFNCGIDGHWARDC 385 T+++VG L +TR+ ++ E+F +YG + + D+ R++ FV D DA LNGR VDG + V+ + P PG G +C+ CG GHW+++C Sbjct: 86 TKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVSTSRVR------------PKPGMGDPEQCYRCGRSGHWSKEC 183
BLAST of DN617885 vs. ExPASy Swiss-Prot
Match: RSP5_CAEEL (Probable splicing factor, arginine/serine-rich 5 OS=Caenorhabditis elegans GN=rsp-5 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 1.823e-11 Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 68 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRDFAFVEFSDPRDADDARYSLNGRDVDGS--RIIVEFA 271 RLY+G++ R RD+E YG+I ++ MK FAFV+F D RDA+DA + L+G+ ++GS R++VE A Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEGSSMRLVVEMA 72
BLAST of DN617885 vs. ExPASy Swiss-Prot
Match: RSP3_CAEEL (Probable splicing factor, arginine/serine-rich 3 OS=Caenorhabditis elegans GN=rsp-3 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11 Identity = 45/113 (39.82%), Postives = 59/113 (52.21%), Query Frame = 2 Query: 68 RLYVGRLASRTRSRDLEEIFSRYGRIRDVDMKRD----FAFVEFSDPRDADDARYSLNGRDVDGSRIIVEFAXXXXXXXXXSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG 394 ++YVG L R +++E+IF +YGRI+ VD+K FAFVEF D RDA+DA + +G + DG RI VEF G GP GR G D H D + G Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFTR-------------GVGPRGPGGRPLQDGGD-HRGGDFRGG 108 The following BLAST results are available for this feature:
BLAST of DN617885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617885 ID=DN617885; Name=DN617885; organism=Citrus sinensis; type=EST; length=633bpback to top |