DN617869

Overview
NameDN617869
Unique NameDN617869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5755 contig Csv1_Contig5755:499..1141. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.072e-18
Identity = 48/101 (47.52%), Postives = 60/101 (59.41%), Query Frame = -3
Query:  351 NRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKR-----GAKSEDEE 638
            NRA  SGYWKATG DK +      +  G+KK LVFY GKPP G +T+WIMHEYRL     A      A   A+  D+WVLCR++ KK       ++ E+EE
Sbjct:   90 NRAAASGYWKATGADKPVL--HNGRTAGIKKALVFYHGKPPRGVKTEWIMHEYRLAKKGGAAAA---AGAGALRLDDWVLCRLYNKKNEWEKMQSRKEEEE 185          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.072e-18
Identity = 42/87 (48.28%), Postives = 60/87 (68.97%), Query Frame = -3
Query:  381 SNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLK 641
            +NRAT +GYWKATG D++I +S+   ++GMKKTLVFY+G+ P G ++ W+MHEYRL        K ++    + A D WVLC++ LK
Sbjct:   92 TNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRL------DGKFSYHYISSSAKDEWVLCKVCLK 172          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.029e-18
Identity = 50/101 (49.50%), Postives = 62/101 (61.39%), Query Frame = -3
Query:  363 NRATGSGYWKATGLDKQIATSRG--NQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAP-------QKKNFAQTPAVATDNWVLCRIFLKKRGAKS 638
            NRA  SGYWKATG DK + ++ G  ++ VG+KK LVFY GKPP G ++DWIMHEYRL    N P        KKN     ++  D+WVLCRI+ K     S
Sbjct:   90 NRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTD--NKPTHICDFGNKKN-----SLRLDDWVLCRIYKKNNSTAS 183          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.028e-17
Identity = 46/93 (49.46%), Postives = 60/93 (64.52%), Query Frame = -3
Query:  360 NRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRGAKSE 638
            NR  GSGYWKATG DK I T+ G + VG+KK LVFY GK P G++T+WIMHEYRL+  + +              D+WVLCRI+ K  G++ +
Sbjct:   87 NRVAGSGYWKATGTDK-IITADGRR-VGIKKALVFYAGKAPKGTKTNWIMHEYRLIEHSRSHGSSKL--------DDWVLCRIYKKTSGSQRQ 169          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.754e-17
Identity = 45/88 (51.14%), Postives = 56/88 (63.64%), Query Frame = -3
Query:  378 SNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKK 641
            +NRAT +G+WKATG DK I  +   +I GM+KTLVFY G+ PHG +TDWIMHEYRL                 V  D WV+CR+F+KK
Sbjct:   85 TNRATTAGFWKATGRDKAIFLANACRI-GMRKTLVFYVGRAPHGKKTDWIMHEYRL-----------DQDNVDVQEDGWVVCRVFMKK 160          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.754e-17
Identity = 42/87 (48.28%), Postives = 60/87 (68.97%), Query Frame = -3
Query:  381 SNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLK 641
            +NRAT +GYWKATG D+ I   R  ++VGM+KTLVFY+G+ P G +TDW+MHE+RL  + + P       + +   ++WVLCR+F K
Sbjct:   92 TNRATATGYWKATGKDRTIL--RKGKLVGMRKTLVFYQGRAPRGRKTDWVMHEFRLQGSHHPPN-----HSLSSPKEDWVLCRVFHK 171          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.754e-17
Identity = 45/87 (51.72%), Postives = 57/87 (65.52%), Query Frame = -3
Query:  378 NRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKK 638
            NRA G+GYWKATG DK I   +    +G+KK LVFY GK P G +T+WIMHEYRL   AN  +  +  +   +  D+WVLCRI+ KK
Sbjct:  123 NRAAGTGYWKATGADKPIGKPK---TLGIKKALVFYAGKAPKGIKTNWIMHEYRL---ANVDRSASTNKKNNLRLDDWVLCRIYNKK 203          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC7_ARATH (NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.291e-17
Identity = 44/92 (47.83%), Postives = 61/92 (66.30%), Query Frame = -3
Query:  369 SNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAAN-APQKKNFAQTPAVATDNWVLCRIFLKKRGA 641
            +NRAT +G+WKATG DK I     + ++GM+KTLVFY+G+ P+G ++DWIMHEYRL T  N  PQ+           + WV+CR+F K+  A
Sbjct:   82 TNRATKAGFWKATGRDKAIYLR--HSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQE-----------EGWVVCRVFKKRLAA 160          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.908e-17
Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = -3
Query:  360 SNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIF----LKKRGAKSE 641
            +NRAT +GYWKATG D++I +S+   +VGMKKTLVFY+G+ P G +++W+MHEYRL        K ++      + D WV+ R+F    L   GA SE
Sbjct:   89 TNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRL------EGKFSYHFISRSSKDEWVISRVFQKTTLASTGAVSE 180          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC12_ARATH (NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.908e-17
Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = -3
Query:  357 SNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQT-----PAVATDNWVLCRIFLKKRGAKSED 641
            +NRAT +G+WKATG DK I +      +G++KTLVFY+G+ PHG ++DWIMHEYRL    + P    +A        +   + WV+CR+F KK   K +D
Sbjct:   91 TNRATVAGFWKATGRDKIICSCVRR--IGLRKTLVFYKGRAPHGQKSDWIMHEYRL---DDTPMSNGYADVVTEDPMSYNEEGWVVCRVFRKKNYQKIDD 185          
The following BLAST results are available for this feature:
BLAST of DN617869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
NAC67_ORYSJ2.072e-1847.52NAC domain-containing protein 67 OS=Oryza sativa s... [more]
NAC54_ARATH2.072e-1848.28Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC18_ARATH6.029e-1849.50NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC72_ARATH1.028e-1749.46NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC76_ORYSJ1.754e-1751.14NAC domain-containing protein 76 OS=Oryza sativa s... [more]
NAC22_ARATH1.754e-1748.28NAC domain-containing protein 21/22 OS=Arabidopsis... [more]
NA102_ARATH1.754e-1751.72NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC7_ARATH2.291e-1747.83NAC domain-containing protein 7 OS=Arabidopsis tha... [more]
NAC98_ARATH3.908e-1745.92Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NAC12_ARATH3.908e-1744.00NAC domain-containing protein 12 OS=Arabidopsis th... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01M19_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617869 ID=DN617869; Name=DN617869; organism=Citrus sinensis; type=EST; length=643bp
CCCCCTTTTTTGACTAAACGACCAAACATTAGATTACTTGATGATGATGG
ATAATTGGGTATTCTGATTTTTCTAATCAGAAACGCCAATTACTTGTACA
GAACACTAATTAAAAAGAGAGAAATTATTGAAAATGTTTACTGCTGTTTT
CTTCTAAAGTAAGGGAAGCTATTGCAACTACTCTCTTCATGATCGTCTGA
TTCATTTGAAGAAACTTCAGTGACTCCACTTGAGCCTGAGGAAGATGAAG
TTGGAACAAGGTTCAAGTCAGCCCTTTCCTCCTTTCTCATAAAATCATAA
AAAACCGGCTTGGGCCCGTTAGCCCTGGTTCCTCCAATTTCGGTGCACGT
TTCCTCATCCTCACTCTTGGCTCCTCTTTTCTTCAAAAAGATGCGGCATA
GAACCCAATTGTCCGTTGCCACAGCTGGGGTCTGGGCAAAGTTTTTCTTT
TGAGGGGCATTGGCAGCAGTAACAAGGCGGTATTCATGCATGATCCAATC
AGTCCTAGAGCCGTGTGGTGGCTTGCCTCTATAAAAAACGAGAGTTTTTT
TCATTCCCACGATTTGGTTGCCCCTGGAAGTCGCAATTTGCTTGTCAAGC
CCAGTTGCCTTCCAATAACCAGACCCCGTGGCCCTGTTCGATC
back to top