DN617869

Overview
NameDN617869
Unique NameDN617869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5755 contig Csv1_Contig5755:499..1141. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC66_ARATH (NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.104e-17
Identity = 46/98 (46.94%), Postives = 64/98 (65.31%), Query Frame = -3
Query:  363 SNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRL----VTAANAPQKKNFAQTPAVATD-NWVLCRIFLKKRGAKS 641
            +NRAT  G+WKATG DK I T+ G++I GM+KTLVFY+G+ PHG ++DWIMHEYRL    + ++      N      + +D  WV+CR+F K    K+
Sbjct:   86 TNRATTVGFWKATGRDKTIYTN-GDRI-GMRKTLVFYKGRAPHGQKSDWIMHEYRLDESVLISSCGDHDVNVETCDVIGSDEGWVVCRVFKKNNLCKN 181          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.137e-16
Identity = 43/104 (41.35%), Postives = 63/104 (60.58%), Query Frame = -3
Query:  372 SNRATGSGYWKATGLDKQI--------------ATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRG 641
            +NRAT  GYWKATG D++I              ++++  Q+VGMKKTLVFY G+ P G++T+W+MHE+RL    +A    +         D WV+C++F KK+G
Sbjct:   91 TNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRL----HANLHNHHPNLRLNPKDEWVVCKVFHKKQG 190          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.308e-16
Identity = 44/97 (45.36%), Postives = 61/97 (62.89%), Query Frame = -3
Query:  351 SNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRGAKSEDEE 641
            +NRAT  GYWK TG D++I    G+++VGMKKTLV+++G+ P G RT+W+MHEYRL   ++   KK       V  + +VLCRIF K        E+
Sbjct:   83 TNRATEKGYWKTTGKDREIRN--GSRVVGMKKTLVYHKGRAPRGERTNWVMHEYRL---SDEDLKK-----AGVPQEAYVLCRIFQKSGTGPKNGEQ 169          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.144e-15
Identity = 41/106 (38.68%), Postives = 59/106 (55.66%), Query Frame = -3
Query:  360 NRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANA-----PQKKNFAQ--------TPAVATDNWVLCRIFLKKRGAKSE 638
            NR TG G+WKATG D+ I +    + +G+KK+LVFYRG+   G +TDW+MHE+RL + +++     P   N  Q            + D W +CRIF K     S+
Sbjct:   93 NRVTGGGFWKATGTDRPIYSLDSTRCIGLKKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKELPSNDAWAICRIFKKTNAVSSQ 198          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC42_ARATH (NAC domain-containing protein 42 OS=Arabidopsis thaliana GN=NAC042 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.064e-14
Identity = 38/84 (45.24%), Postives = 53/84 (63.10%), Query Frame = -3
Query:  387 NRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIF 638
            NR TGSG+WKATG+DK + ++     VG+KK+LV+Y G    G++TDW+MHE+RL +            +PA   + W LCRIF
Sbjct:   91 NRVTGSGFWKATGIDKPVYSNL--DCVGLKKSLVYYLGSAGKGTKTDWMMHEFRLPSTTK-------TDSPAQQAEVWTLCRIF 165          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC68_ARATH (NAC domain-containing protein 68 OS=Arabidopsis thaliana GN=NAC68 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.371e-14
Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = -3
Query:  447 RATGSGYWKATGLDKQIATSRGNQIV-GMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQK 635
            R TGSG+WK TG+D++I   RGN +V G+KKTLV++ GK PHG RT W+MHEY +    +  +K
Sbjct:   82 RTTGSGFWKPTGVDREIRDKRGNGVVIGIKKTLVYHEGKSPHGVRTPWVMHEYHITCLPHHKRK 145          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC74_ORYSJ (NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.282e-14
Identity = 41/84 (48.81%), Postives = 51/84 (60.71%), Query Frame = -3
Query:  390 SNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRI 641
            SNRAT +GYWK+TG D+ I    G Q +G KKTLVF+ G+PP G RT+WIMHEY +         +   Q      D +VLCRI
Sbjct:   83 SNRATVAGYWKSTGKDRAI--KMGKQTIGTKKTLVFHEGRPPTGRRTEWIMHEYYI--------DERECQACPDMKDAYVLCRI 156          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC69_ARATH (NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.840e-13
Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = -3
Query:  381 SNRATGSGYWKATGLDKQIATSRGNQ-IVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLK 641
            + R T SGYWKATG+D++I   RGN+  +G+KKTLV+Y G+ P G  T W+MHEY +      PQ +           N+V+C++  K
Sbjct:   79 TKRTTSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVYYEGRVPKGVWTPWVMHEYHITC---LPQDQR----------NYVICQVMYK 153          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC90_ARATH (NAC domain-containing protein 90 OS=Arabidopsis thaliana GN=NAC090 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.185e-11
Identity = 36/94 (38.30%), Postives = 56/94 (59.57%), Query Frame = -3
Query:  357 NRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRGAKSED 638
            +R TGSGYWKATG    +  S+ N+++G KKT+VFY GK P G +T W M+EY  V      +  N +  P +  + + LCR+++    +++ D
Sbjct:   84 SRTTGSGYWKATGSPGPVF-SKDNKMIGAKKTMVFYTGKAPTGRKTKWKMNEYHAV-----DETVNASTIPKLRRE-FSLCRVYITTGSSRAFD 170          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC61_ARATH (Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana GN=NAC061 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.139e-11
Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = -3
Query:  459 NRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAAN 638
            +R TGSGYWKATG    +  S  N+++G+KKT+VFY GK P G +T W M+EY+ V  A+
Sbjct:   83 SRTTGSGYWKATGSPGPVF-SPDNRVIGVKKTMVFYTGKAPTGRKTKWKMNEYKAVETAS 141          
The following BLAST results are available for this feature:
BLAST of DN617869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
NAC66_ARATH5.104e-1746.94NAC domain-containing protein 66 OS=Arabidopsis th... [more]
NAC77_ORYSJ1.137e-1641.35NAC domain-containing protein 77 OS=Oryza sativa s... [more]
NAC78_ARATH3.308e-1645.36NAC domain-containing protein 78 OS=Arabidopsis th... [more]
NAC94_ARATH2.144e-1538.68Putative NAC domain-containing protein 94 OS=Arabi... [more]
NAC42_ARATH1.064e-1445.24NAC domain-containing protein 42 OS=Arabidopsis th... [more]
NAC68_ARATH2.371e-1453.13NAC domain-containing protein 68 OS=Arabidopsis th... [more]
NAC74_ORYSJ5.282e-1448.81NAC domain-containing protein 74 OS=Oryza sativa s... [more]
NAC69_ARATH5.840e-1342.05NAC domain-containing protein 69 OS=Arabidopsis th... [more]
NAC90_ARATH4.185e-1138.30NAC domain-containing protein 90 OS=Arabidopsis th... [more]
NAC61_ARATH7.139e-1151.67Putative NAC domain-containing protein 61 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01M19_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617869 ID=DN617869; Name=DN617869; organism=Citrus sinensis; type=EST; length=643bp
CCCCCTTTTTTGACTAAACGACCAAACATTAGATTACTTGATGATGATGG
ATAATTGGGTATTCTGATTTTTCTAATCAGAAACGCCAATTACTTGTACA
GAACACTAATTAAAAAGAGAGAAATTATTGAAAATGTTTACTGCTGTTTT
CTTCTAAAGTAAGGGAAGCTATTGCAACTACTCTCTTCATGATCGTCTGA
TTCATTTGAAGAAACTTCAGTGACTCCACTTGAGCCTGAGGAAGATGAAG
TTGGAACAAGGTTCAAGTCAGCCCTTTCCTCCTTTCTCATAAAATCATAA
AAAACCGGCTTGGGCCCGTTAGCCCTGGTTCCTCCAATTTCGGTGCACGT
TTCCTCATCCTCACTCTTGGCTCCTCTTTTCTTCAAAAAGATGCGGCATA
GAACCCAATTGTCCGTTGCCACAGCTGGGGTCTGGGCAAAGTTTTTCTTT
TGAGGGGCATTGGCAGCAGTAACAAGGCGGTATTCATGCATGATCCAATC
AGTCCTAGAGCCGTGTGGTGGCTTGCCTCTATAAAAAACGAGAGTTTTTT
TCATTCCCACGATTTGGTTGCCCCTGGAAGTCGCAATTTGCTTGTCAAGC
CCAGTTGCCTTCCAATAACCAGACCCCGTGGCCCTGTTCGATC
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