DN617867

Overview
NameDN617867
Unique NameDN617867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length526
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_RALEJ (Hydroxyacylglutathione hydrolase OS=Ralstonia eutropha (strain JMP134) GN=gloB PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.143e-17
Identity = 52/118 (44.07%), Postives = 64/118 (54.24%), Query Frame = 3
Query:  168 VYGGSLDNVKGCTHQVENGDKFSIGAH-VNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            V G + + + G T  V  GD  ++ A  +    L  P HT GH++Y      G  P VF GDTLF  GCG+ FEG+  QM  SL   L SLP  T+VYC HEYT  N+ FA  V P N
Sbjct:   80 VIGPAGERIGGRTQAVREGDTVTLPAPALQFRVLDVPGHTAGHVAY-AGDLPGVGPVVFCGDTLFATGCGRLFEGTPAQMLASL-DKLASLPGETRVYCAHEYTRSNVRFARAVEPGN 195          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_PSE14 (Hydroxyacylglutathione hydrolase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=gloB PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.143e-17
Identity = 43/82 (52.44%), Postives = 54/82 (65.85%), Query Frame = 3
Query:  273 PCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            P HT GHI++Y   ++   P +F+GDTLF AGCG+ FEG+ EQM+ SL   L  LP  T +YC HEYT+ NL FA  V P N
Sbjct:  110 PGHTLGHIAFY--HEDATTPLLFSGDTLFAAGCGRLFEGTPEQMHDSL-ERLAKLPDSTLIYCAHEYTLSNLRFAQAVEPDN 188          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_CUPTR (Hydroxyacylglutathione hydrolase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=gloB PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.143e-17
Identity = 53/121 (43.80%), Postives = 69/121 (57.02%), Query Frame = 3
Query:  162 IKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLS-LHTPCHTKGHISYYVT-GKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            + V G + + + G T  +  GD  ++ A    L  L  P HT GHI+Y    G+ G  PA+F GDTLF +GCG+ FEG+  QM  SL   L +LP  T+VYC HEYT  N+ FA  V P N
Sbjct:   78 LPVLGPAGERIGGRTQALREGDVATLEAPALTLRVLDVPGHTAGHIAYVADLGEAG--PALFCGDTLFASGCGRLFEGTPAQMLASL-DKLAALPGDTRVYCAHEYTRSNVRFARAVEPGN 195          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_SHELP (Hydroxyacylglutathione hydrolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=gloB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.493e-17
Identity = 53/122 (43.44%), Postives = 67/122 (54.92%), Query Frame = 3
Query:  162 IKVYGGSLDNVKGCTHQVENGDKFSIGAHV---NVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            + VYG   +N+KG  H + +G   S+       +    H P HT GHI+Y +      D  +F GDTLF AGCG+ FEG+  QM+ SL  TL  L + T VY  HEYT  NL FALTV   N
Sbjct:   75 LTVYGPDNENIKGINHPI-SGQTESVKPEKLDSDAAVFHLPGHTLGHIAYLI------DDHLFCGDTLFSAGCGRLFEGTPAQMHHSL-QTLAQLDETTLVYPAHEYTQANLAFALTVENDN 188          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_RHOP2 (Hydroxyacylglutathione hydrolase OS=Rhodopseudomonas palustris (strain HaA2) GN=gloB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.493e-17
Identity = 47/103 (45.63%), Postives = 62/103 (60.19%), Query Frame = 3
Query:  210 QVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            +VE GD   +G  +    L TP HT  HISY       +D A+F  DTLF  GCG+ FEG+   M++SL + L +LP   ++YCGHEYT  N+ FALT+ P N
Sbjct:   92 RVEEGDVVKVGG-LEARVLETPGHTLDHISYVFA----DDRALFAADTLFSIGCGRVFEGTYPMMWESL-LKLRALPDDYKLYCGHEYTASNVKFALTIEPEN 188          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_RHILO (Hydroxyacylglutathione hydrolase OS=Rhizobium loti GN=gloB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.493e-17
Identity = 49/121 (40.50%), Postives = 66/121 (54.55%), Query Frame = 3
Query:  162 IKVYGGSLDNVK--GCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            +++ G   +  K  G    VE G    +G    +  + TP HT GH+SY++   +      FT DTLF  GCG+ FE     MY+SL   L +LP  T +YCGHEYT+ N  FALTV P+N
Sbjct:   74 LRIVGPEAEKAKIPGIDETVEEGSVLHLGDE-RIEVIATPGHTAGHVSYHLPASK----VAFTADTLFALGCGRLFECKPPVMYESLR-KLAALPAATTIYCGHEYTLANARFALTVDPTN 188          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_RHIL3 (Hydroxyacylglutathione hydrolase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=gloB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.493e-17
Identity = 51/110 (46.36%), Postives = 61/110 (55.45%), Query Frame = 3
Query:  192 VKGCTHQVENGDKFSIGAH-VNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            + G    + +GD F  G H VNV+   TP HT GHI Y+      +D  +F  DTLF  GCG+ FE  A  M+ SL   L  LP  T VY GHEYT+ N  FALTV P N
Sbjct:   87 IPGLDRAMADGDSFLFGDHTVNVIE--TPGHTAGHICYHFV----DDKLLFAADTLFALGCGRLFERPAADMWHSL-QKLAVLPDETAVYFGHEYTLSNARFALTVDPDN 189          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_PSEFS (Hydroxyacylglutathione hydrolase OS=Pseudomonas fluorescens (strain SBW25) GN=gloB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.493e-17
Identity = 50/119 (42.02%), Postives = 70/119 (58.82%), Query Frame = 3
Query:  165 KVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            KVYG + + +      + + D+ ++ G   ++ ++  P HT GHI++Y +G       +  GDTLF AGCG+ FEG+ EQMY SL   L +LP  T+VYC HEYT  NL FA  V P N
Sbjct:   75 KVYGPANEKIPARDVALNDNDRITVLGWDFDIYTV--PGHTLGHITFYHSG------VLLCGDTLFAAGCGRLFEGTPEQMYTSL-ERLAALPADTRVYCTHEYTQSNLKFAQAVEPDN 184          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_SYNSC (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain CC9605) GN=gloB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.950e-17
Identity = 46/100 (46.00%), Postives = 62/100 (62.00%), Query Frame = 3
Query:  240 GAHVNVLS-----LHTPCHTKGHISYYVTGKEGED--PAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            G HV VL      +    HT+ HI++++   +G +  P +F GDTLF  GCG+ FEGSAEQM+Q+L   L  LP+ TQV C HEYT  NL +A+   P+N
Sbjct:   95 GDHVTVLGETVEVMDVAAHTRAHIAFFLPNPKGAEIRPLLFCGDTLFSGGCGRLFEGSAEQMHQAL-QKLAELPEATQVCCAHEYTEANLQWAVAQQPNN 193          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_RHIEC (Hydroxyacylglutathione hydrolase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=gloB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.950e-17
Identity = 49/109 (44.95%), Postives = 59/109 (54.13%), Query Frame = 3
Query:  192 VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            + G    + +GD F  G H  V  + TP HT GHI Y+      +D  +F  DTLF  GCG+ FE  A  M+ SL   L  LP  T VY GHEYT+ N  FALTV P N
Sbjct:   87 IPGLDRTMADGDSFLFGDHT-VKVIETPGHTAGHICYHFV----DDKLLFAADTLFALGCGRLFERPAADMWHSL-QKLAVLPDETAVYFGHEYTLSNARFALTVDPDN 189          
The following BLAST results are available for this feature:
BLAST of DN617867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GLO2_RALEJ1.143e-1744.07Hydroxyacylglutathione hydrolase OS=Ralstonia eutr... [more]
GLO2_PSE141.143e-1752.44Hydroxyacylglutathione hydrolase OS=Pseudomonas sy... [more]
GLO2_CUPTR1.143e-1743.80Hydroxyacylglutathione hydrolase OS=Cupriavidus ta... [more]
GLO2_SHELP1.493e-1743.44Hydroxyacylglutathione hydrolase OS=Shewanella loi... [more]
GLO2_RHOP21.493e-1745.63Hydroxyacylglutathione hydrolase OS=Rhodopseudomon... [more]
GLO2_RHILO1.493e-1740.50Hydroxyacylglutathione hydrolase OS=Rhizobium loti... [more]
GLO2_RHIL31.493e-1746.36Hydroxyacylglutathione hydrolase OS=Rhizobium legu... [more]
GLO2_PSEFS1.493e-1742.02Hydroxyacylglutathione hydrolase OS=Pseudomonas fl... [more]
GLO2_SYNSC1.950e-1746.00Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_RHIEC1.950e-1744.95Hydroxyacylglutathione hydrolase OS=Rhizobium etli... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01M18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617867 ID=DN617867; Name=DN617867; organism=Citrus sinensis; type=EST; length=526bp
AGACCACTCAAAGAAGCTCGCGGTTGTTGATCCAGTGGAGCCAGAGAAGA
TCATTGAGGCTGCCAAACAACATGGTGTCAATCTCACCACCGTTCTCACT
ACTCATCATCACTGGGACCATGCTGGNAGGGAACGAAAAGATGAAGGAGA
TGGTGCCTGGGATTAAGGTGTATGGTGGCTCACTTGATAATGTAAAGGGG
TGCACTCATCAAGTGGAAAATGGTGATAAGTTCTCAATTGGAGCTCATGT
CAATGTACTGTCTCTTCACACACCTTGCCATACCAAAGGTCACATAAGTT
ATTATGTGACTGGAAAAGAGGGAGAAGACCCAGCTGTTTTCACTGGAGAC
ACACTGTTTGTTGCTGGTTGTGGAAAATTTTTTGAAGGCTCGGCAGAACA
GATGTATCAATCCCTGTGCGTGACATTGGGCTCATTACCTCAGCCAACTC
AAGTTTACTGTGGCCATGAGTACACAGTGAAGAACCTACTATTTGCTCTT
ACTGTCTCACCAAGCAATGTGAAGCT
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