DN617867

Overview
NameDN617867
Unique NameDN617867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length526
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig516 contig Csv1_Contig516:81..604. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_ANAVT (Hydroxyacylglutathione hydrolase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gloB PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.368e-22
Identity = 57/135 (42.22%), Postives = 82/135 (60.74%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVKGCTHQV--ENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPA-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSNVK 524
            GN+++ +  P +KVYGG+ D  +    QV  + GD+      V  + +  P HT+ HI+YY   +  + P  +F GDTLF  GCG+ FEG+  QM +SL   L SLP+ T+V+C HEYT+KNL FAL+V   N +
Sbjct:   62 GNQQLIQNFPQLKVYGGAEDKGRIPGQQVFLQPGDRVQFTDRVAEV-IFVPGHTRAHIAYYFPPQTADTPGELFCGDTLFAGGCGRLFEGTPAQMVESL-TKLRSLPENTRVWCAHEYTLKNLQFALSVDSENTE 194          

HSP 2 Score: 21.1718 bits (43), Expect = 9.368e-22
Identity = 11/36 (30.56%), Postives = 14/36 (38.89%), Query Frame = 2
Query:   20 AVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAG 127
            AVVDP E E +++   Q               DH G
Sbjct:   26 AVVDPAEAEPVLKQLAQLNAELVAIFNTHHHNDHVG 61          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_SYNY3 (Hydroxyacylglutathione hydrolase OS=Synechocystis sp. (strain PCC 6803) GN=gloB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.704e-21
Identity = 58/138 (42.03%), Postives = 78/138 (56.52%), Query Frame = 3
Query:  114 GTMLXGNEKMKEMVPGIKVYGGSLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPA-VFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            G  +  N ++    P ++VYGG  D   + G T  + +GD+ S  A         P HT+GHI+YY     GE    +F GDT+F  GCG+ FEG+  QM QS+   L  LP  T+++C HEYT+ NL FALTV PSN
Sbjct:   57 GDHVGANRELLAKYPNLEVYGGVEDQGRIPGQTVFLRDGDRLSF-ADREATVYFVPGHTRGHIAYYFAPGSGETIGDLFCGDTIFAGGCGRLFEGTPAQMVQSIG-KLRQLPDQTRLWCAHEYTLGNLKFALTVDPSN 192          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_PSEPG (Hydroxyacylglutathione hydrolase OS=Pseudomonas putida (strain GB-1) GN=gloB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.704e-21
Identity = 56/131 (42.75%), Postives = 82/131 (62.60%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            G E++K++  G +V G + + + G    ++ GDK  + G    VL++  P HT GHI+++  G     P +F+GDTLF AGCG+ FEG+ EQM  +L   L +LP+ T+VYC HEYT+ NL FA  V P+N
Sbjct:   64 GVERLKQL-SGARVCGPANERIPGRDLALDEGDKVDVLGVTFQVLAV--PGHTLGHIAFFSDGPP--TPVLFSGDTLFAAGCGRMFEGTPEQMQPALA-RLAALPEQTEVYCAHEYTLSNLRFAKAVEPTN 188          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_BRUSU (Hydroxyacylglutathione hydrolase OS=Brucella suis GN=gloB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.226e-21
Identity = 59/132 (44.70%), Postives = 75/132 (56.82%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVK--GCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            GNE +KE   G+ + G   +  K  G    V+ GD+F+ G    V  + TP HT G ISYY+   +     VFTGDTLF  GCG+ FEG+   M+ SL   L +LP  T +YCGHEYT  N  FALT+ P N
Sbjct:   66 GNEPLKEKF-GVSIIGPEAEKAKIPGIDRTVKGGDEFTFGLF-KVKVISTPGHTAGGISYYLPDAK----VVFTGDTLFALGCGRLFEGTPATMFHSL-EKLVALPGDTALYCGHEYTQNNARFALTIDPDN 190          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_BRUSI (Hydroxyacylglutathione hydrolase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=gloB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.226e-21
Identity = 59/132 (44.70%), Postives = 75/132 (56.82%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVK--GCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            GNE +KE   G+ + G   +  K  G    V+ GD+F+ G    V  + TP HT G ISYY+   +     VFTGDTLF  GCG+ FEG+   M+ SL   L +LP  T +YCGHEYT  N  FALT+ P N
Sbjct:   69 GNEPLKEKF-GVSIIGPEAEKAKIPGIDRTVKGGDEFTFGLF-KVKVISTPGHTAGGISYYLPDAK----VVFTGDTLFALGCGRLFEGTPATMFHSL-EKLVALPGDTALYCGHEYTQNNARFALTIDPDN 193          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_BRUO2 (Hydroxyacylglutathione hydrolase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=gloB PE=3 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 2.226e-21
Identity = 59/132 (44.70%), Postives = 75/132 (56.82%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVK--GCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            GNE +KE   G+ + G   +  K  G    V+ GD+F+ G    V  + TP HT G ISYY+   +     VFTGDTLF  GCG+ FEG+   M+ SL   L +LP  T +YCGHEYT  N  FALT+ P N
Sbjct:   66 GNEPLKEKF-GVSIIGPEAEKAKIPGIDRTVKGGDEFTFGLF-KVKVISTPGHTAGGISYYLPDAK----VVFTGDTLFALGCGRLFEGTPATMFHSL-EKLVALPGDTALYCGHEYTQNNARFALTIDPDN 190          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_BRUME (Hydroxyacylglutathione hydrolase OS=Brucella melitensis GN=gloB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.226e-21
Identity = 59/132 (44.70%), Postives = 75/132 (56.82%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVK--GCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            GNE +KE   G+ + G   +  K  G    V+ GD+F+ G    V  + TP HT G ISYY+   +     VFTGDTLF  GCG+ FEG+   M+ SL   L +LP  T +YCGHEYT  N  FALT+ P N
Sbjct:   66 GNEPLKEKF-GVSIIGPEAEKAKIPGIDRTVKGGDEFTFGLF-KVKVISTPGHTAGGISYYLPDAK----VVFTGDTLFALGCGRLFEGTPATMFHSL-EKLVALPGDTALYCGHEYTQNNARFALTIDPDN 190          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_BRUMB (Hydroxyacylglutathione hydrolase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=gloB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.226e-21
Identity = 59/132 (44.70%), Postives = 75/132 (56.82%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVK--GCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            GNE +KE   G+ + G   +  K  G    V+ GD+F+ G    V  + TP HT G ISYY+   +     VFTGDTLF  GCG+ FEG+   M+ SL   L +LP  T +YCGHEYT  N  FALT+ P N
Sbjct:   69 GNEPLKEKF-GVSIIGPEAEKAKIPGIDRTVKGGDEFTFGLF-KVKVISTPGHTAGGISYYLPDAK----VVFTGDTLFALGCGRLFEGTPATMFHSL-EKLVALPGDTALYCGHEYTQNNARFALTIDPDN 193          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_BRUC2 (Hydroxyacylglutathione hydrolase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=gloB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.226e-21
Identity = 59/132 (44.70%), Postives = 75/132 (56.82%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVK--GCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            GNE +KE   G+ + G   +  K  G    V+ GD+F+ G    V  + TP HT G ISYY+   +     VFTGDTLF  GCG+ FEG+   M+ SL   L +LP  T +YCGHEYT  N  FALT+ P N
Sbjct:   69 GNEPLKEKF-GVSIIGPEAEKAKIPGIDRTVKGGDEFTFGLF-KVKVISTPGHTAGGISYYLPDAK----VVFTGDTLFALGCGRLFEGTPATMFHSL-EKLVALPGDTALYCGHEYTQNNARFALTIDPDN 193          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_BRUAB (Hydroxyacylglutathione hydrolase OS=Brucella abortus GN=gloB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.226e-21
Identity = 59/132 (44.70%), Postives = 75/132 (56.82%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVK--GCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            GNE +KE   G+ + G   +  K  G    V+ GD+F+ G    V  + TP HT G ISYY+   +     VFTGDTLF  GCG+ FEG+   M+ SL   L +LP  T +YCGHEYT  N  FALT+ P N
Sbjct:   66 GNEPLKEKF-GVSIIGPEAEKAKIPGIDRTVKGGDEFTFGLF-KVKVISTPGHTAGGISYYLPDAK----VVFTGDTLFALGCGRLFEGTPATMFHSL-EKLVALPGDTALYCGHEYTQNNARFALTIDPDN 190          
The following BLAST results are available for this feature:
BLAST of DN617867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GLO2_ANAVT9.368e-2242.22Hydroxyacylglutathione hydrolase OS=Anabaena varia... [more]
GLO2_SYNY31.704e-2142.03Hydroxyacylglutathione hydrolase OS=Synechocystis ... [more]
GLO2_PSEPG1.704e-2142.75Hydroxyacylglutathione hydrolase OS=Pseudomonas pu... [more]
GLO2_BRUSU2.226e-2144.70Hydroxyacylglutathione hydrolase OS=Brucella suis ... [more]
GLO2_BRUSI2.226e-2144.70Hydroxyacylglutathione hydrolase OS=Brucella suis ... [more]
GLO2_BRUO22.226e-2144.70Hydroxyacylglutathione hydrolase OS=Brucella ovis ... [more]
GLO2_BRUME2.226e-2144.70Hydroxyacylglutathione hydrolase OS=Brucella melit... [more]
GLO2_BRUMB2.226e-2144.70Hydroxyacylglutathione hydrolase OS=Brucella melit... [more]
GLO2_BRUC22.226e-2144.70Hydroxyacylglutathione hydrolase OS=Brucella canis... [more]
GLO2_BRUAB2.226e-2144.70Hydroxyacylglutathione hydrolase OS=Brucella abort... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01M18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617867 ID=DN617867; Name=DN617867; organism=Citrus sinensis; type=EST; length=526bp
AGACCACTCAAAGAAGCTCGCGGTTGTTGATCCAGTGGAGCCAGAGAAGA
TCATTGAGGCTGCCAAACAACATGGTGTCAATCTCACCACCGTTCTCACT
ACTCATCATCACTGGGACCATGCTGGNAGGGAACGAAAAGATGAAGGAGA
TGGTGCCTGGGATTAAGGTGTATGGTGGCTCACTTGATAATGTAAAGGGG
TGCACTCATCAAGTGGAAAATGGTGATAAGTTCTCAATTGGAGCTCATGT
CAATGTACTGTCTCTTCACACACCTTGCCATACCAAAGGTCACATAAGTT
ATTATGTGACTGGAAAAGAGGGAGAAGACCCAGCTGTTTTCACTGGAGAC
ACACTGTTTGTTGCTGGTTGTGGAAAATTTTTTGAAGGCTCGGCAGAACA
GATGTATCAATCCCTGTGCGTGACATTGGGCTCATTACCTCAGCCAACTC
AAGTTTACTGTGGCCATGAGTACACAGTGAAGAACCTACTATTTGCTCTT
ACTGTCTCACCAAGCAATGTGAAGCT
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