DN617867

Overview
NameDN617867
Unique NameDN617867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length526
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig516 contig Csv1_Contig516:81..604. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_SHIB3 (Hydroxyacylglutathione hydrolase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.797e-21
Identity = 58/132 (43.94%), Postives = 79/132 (59.85%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSNV 521
            G +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++
Sbjct:   61 GVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-NKLSALPDDTLVCCAHEYTLSNMKFALSILPHDL 183          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_MARAV (Hydroxyacylglutathione hydrolase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.797e-21
Identity = 55/124 (44.35%), Postives = 76/124 (61.29%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFA 497
            G +++++  P +++ G +    KG T+ V  GD+    G   NVL++  P HT  HI+YY   +  + P +F GDTLFV GCG+ FEG+ EQM+ SL  TL  LP  T VYC HEYT+ NL FA
Sbjct:   62 GVKELQQQYPDLRIVGPTDSPFKGATNTVHAGDEVVWEGITFNVLAV--PGHTLDHIAYYSDTQVNDKPVLFCGDTLFVCGCGRLFEGTPEQMHTSL-QTLRDLPDNTAVYCAHEYTLANLRFA 182          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_ECO8A (Hydroxyacylglutathione hydrolase OS=Escherichia coli O8 (strain IAI1) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.797e-21
Identity = 58/132 (43.94%), Postives = 79/132 (59.85%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSNV 521
            G +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++
Sbjct:   61 GVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-NKLSALPDDTLVCCAHEYTLSNMKFALSILPHDL 183          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_ECO55 (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain 55989 / EAEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.797e-21
Identity = 58/132 (43.94%), Postives = 79/132 (59.85%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSNV 521
            G +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++
Sbjct:   61 GVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-NKLSALPDDTLVCCAHEYTLSNMKFALSILPHDL 183          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_ECO24 (Hydroxyacylglutathione hydrolase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.797e-21
Identity = 58/132 (43.94%), Postives = 79/132 (59.85%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSNV 521
            G +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++
Sbjct:   61 GVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-NKLSALPDDTLVCCAHEYTLSNMKFALSILPHDL 183          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_ALISL (Hydroxyacylglutathione hydrolase OS=Aliivibrio salmonicida (strain LFI1238) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.797e-21
Identity = 57/132 (43.18%), Postives = 73/132 (55.30%), Query Frame = 3
Query:  123 LXGNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            + G  ++    P I V G   + +   TH V +GD   +  +   + L    HTKGHI+Y        D  +F GDTLF AGCG+ FEG+AEQM+ SL   L +LP  T+VYC HEYT  NL FAL V P N
Sbjct:   60 IGGVPELVRQFPNINVVGPENEPIPTLTHPVGDGDFVEL-FNEKFMVLGVEGHTKGHIAYI------GDEKLFCGDTLFSAGCGRLFEGTAEQMFHSL-QKLAALPDETEVYCAHEYTASNLAFALAVEPDN 183          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_LEGPL (Hydroxyacylglutathione hydrolase OS=Legionella pneumophila (strain Lens) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.958e-21
Identity = 52/133 (39.10%), Postives = 80/133 (60.15%), Query Frame = 3
Query:  123 LXGNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGA-HVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            + G + + +  P  KVYG   + +   TH ++ G    +G+ H ++L    P HT  HISYY    E +   +F GDTLF AGCG+ F+G+ E++++SL +    LP+ T+++C HEYT++NL FA TV P N
Sbjct:   60 IGGVDSLIKQWPSCKVYGPIDERISNLTHPIKQGQSVQVGSLHFHIL--FNPGHTSTHISYY----EPQQGWLFCGDTLFSAGCGRVFDGTIEELHESL-LLFKKLPRNTKIFCAHEYTLQNLKFAHTVEPCN 185          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_LEGPC (Hydroxyacylglutathione hydrolase OS=Legionella pneumophila (strain Corby) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.958e-21
Identity = 53/133 (39.85%), Postives = 80/133 (60.15%), Query Frame = 3
Query:  123 LXGNEKMKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGA-HVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            + G + + +  P  KVYG   + +   TH ++ G    +G+ H ++L    P HT  HISYY    E +   +F GDTLF AGCG+ F+G+ E++++SL +    LP+ T+V+C HEYT++NL FA TV P N
Sbjct:   60 IGGVDSLIKQWPSCKVYGPIDERINNVTHPIKQGQSVQVGSLHFHIL--FNPGHTSTHISYY----EPQKGWLFCGDTLFSAGCGRVFDGTIEELHESL-LLFKKLPRNTKVFCAHEYTLQNLKFAHTVEPCN 185          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_CYAP4 (Hydroxyacylglutathione hydrolase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=gloB PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.958e-21
Identity = 56/134 (41.79%), Postives = 76/134 (56.72%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDNVKGCTHQV--ENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSNVK 524
            GN+++ +  P   VYGG+ D  +    QV  + GD+ +       + L  P HT+ HI+YY          +F GDTLF  GCG+ FEG+  QM  SL   L  LP  T+V+C HEYT+KNL FALT+ P NV+
Sbjct:   62 GNQELLQHFPTAVVYGGAEDRGRIPGQQVFLQPGDRVNFAQRTAEV-LFVPGHTRAHIAYYFPPVNHSSGELFCGDTLFAGGCGRLFEGTPAQMVNSL-NQLRQLPDNTRVWCAHEYTLKNLQFALTIEPENVE 193          
BLAST of DN617867 vs. ExPASy Swiss-Prot
Match: GLO2_SYNJB (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. GN=gloB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.476e-21
Identity = 56/132 (42.42%), Postives = 77/132 (58.33%), Query Frame = 3
Query:  129 GNEKMKEMVPGIKVYGGSLDN--VKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVSPSN 518
            GN ++ E  P  +VYG  +D   + G T +++ G+       +  + L  P HT+GHI+YY +    E   +F GDTLF  GCG+ FEG+ EQM  SL   L  LP+ T+V+C HEYT+ NL FALTV   N
Sbjct:   62 GNRQLLERYPRARVYGSQVDRGRIPGQTVELKAGETVEFAGRLAKV-LFVPGHTRGHIAYYFS----ESGDLFCGDTLFAGGCGRLFEGTPEQMVGSL-DQLRQLPEATRVWCAHEYTLNNLRFALTVDGDN 187          
The following BLAST results are available for this feature:
BLAST of DN617867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GLO2_SHIB33.797e-2143.94Hydroxyacylglutathione hydrolase OS=Shigella boydi... [more]
GLO2_MARAV3.797e-2144.35Hydroxyacylglutathione hydrolase OS=Marinobacter a... [more]
GLO2_ECO8A3.797e-2143.94Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECO553.797e-2143.94Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECO243.797e-2143.94Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ALISL3.797e-2143.18Hydroxyacylglutathione hydrolase OS=Aliivibrio sal... [more]
GLO2_LEGPL4.958e-2139.10Hydroxyacylglutathione hydrolase OS=Legionella pne... [more]
GLO2_LEGPC4.958e-2139.85Hydroxyacylglutathione hydrolase OS=Legionella pne... [more]
GLO2_CYAP44.958e-2141.79Hydroxyacylglutathione hydrolase OS=Cyanothece sp.... [more]
GLO2_SYNJB6.476e-2142.42Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01M18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617867 ID=DN617867; Name=DN617867; organism=Citrus sinensis; type=EST; length=526bp
AGACCACTCAAAGAAGCTCGCGGTTGTTGATCCAGTGGAGCCAGAGAAGA
TCATTGAGGCTGCCAAACAACATGGTGTCAATCTCACCACCGTTCTCACT
ACTCATCATCACTGGGACCATGCTGGNAGGGAACGAAAAGATGAAGGAGA
TGGTGCCTGGGATTAAGGTGTATGGTGGCTCACTTGATAATGTAAAGGGG
TGCACTCATCAAGTGGAAAATGGTGATAAGTTCTCAATTGGAGCTCATGT
CAATGTACTGTCTCTTCACACACCTTGCCATACCAAAGGTCACATAAGTT
ATTATGTGACTGGAAAAGAGGGAGAAGACCCAGCTGTTTTCACTGGAGAC
ACACTGTTTGTTGCTGGTTGTGGAAAATTTTTTGAAGGCTCGGCAGAACA
GATGTATCAATCCCTGTGCGTGACATTGGGCTCATTACCTCAGCCAACTC
AAGTTTACTGTGGCCATGAGTACACAGTGAAGAACCTACTATTTGCTCTT
ACTGTCTCACCAAGCAATGTGAAGCT
back to top