DN617862

Overview
NameDN617862
Unique NameDN617862
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5754 contig Csv1_Contig5754:1..697. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: S15A4_BOVIN (Solute carrier family 15 member 4 OS=Bos taurus GN=SLC15A4 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.666e-17
Identity = 68/188 (36.17%), Postives = 92/188 (48.94%), Query Frame = 3
Query:  177 GNWRACPFILGTECCERLAYYGIATNLVSYLTHKLH--EGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFIGMCTLTLSASIPALKPAECVGALCP-----------SATPAQYA--VFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKRGSFFHWVYFSINIGALIS 695
            G   AC  +L TE  ER A+YG+  NLV +L       EG   A++ +  + G  YL    G  LADA  GR   I     +Y +GM    L A+ PA + A C GA  P           + TP +Y        L L+ LG G +K  ++ FGADQ  D    E  +R  FF+W Y+SIN+GA++S
Sbjct:   21 GRRAACAAVLLTELLERAAFYGVTANLVLFLNGTAFGWEG-AEASQALLLFMGLTYLVSPFGGWLADARLGRARAILLSLALYLLGMLAFPLLAA-PATRSALC-GAPGPTNVRNCSAPPCTDTPTRYCAPAVLSALALVGLGVGAVKANITPFGADQVKDR-GPEATRR--FFNWFYWSINLGAIVS 202          
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: S15A4_XENLA (Solute carrier family 15 member 4 OS=Xenopus laevis GN=slc15a4 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.547e-17
Identity = 63/194 (32.47%), Postives = 93/194 (47.94%), Query Frame = 3
Query:  174 TGNWRACPFILGTECCERLAYYGIATNLVSYLTHKLH--EGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFIGMCTLTLSASIPALKPAECVGA-----------------LCPSATPAQYA-VFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKRGSFFHWVYFSINIGALIS 695
            +G   AC  +L +E  ER+A+YGI +NLV +L  ++   EG   A++ +  + G  YL       LADA  GR++ I     +Y +GM    +  S    + A C                     CP  +    A   F GL ++ LG G +K  ++ FGADQ  D    E  +R  FF+W Y+SIN+GA+IS
Sbjct:   28 SGRGLACAAVLLSELLERVAFYGITSNLVLFLNGQIFGWEGT-QASQALLLFMGITYLVSPFAGWLADALLGRFYVILGSMVLYLLGMLLFPM-VSYSGTRTAFCGDIQWAQIENCSRSNASSDDTCPEPSRRYCAPALFLGLIIVGLGVGSVKANITPFGADQVKDR-GPEATRR--FFNWFYWSINLGAIIS 216          
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: S15A4_HUMAN (Solute carrier family 15 member 4 OS=Homo sapiens GN=SLC15A4 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.547e-17
Identity = 68/183 (37.16%), Postives = 90/183 (49.18%), Query Frame = 3
Query:  177 GNWRACPFILGTECCERLAYYGIATNLVSYLTHK--LHEGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFIGMCTLTLSASIPALKPAECVGAL---CPSATPAQYA-----VFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKRGSFFHWVYFSINIGALIS 695
            G   AC  +L TE  ER A+YGI +NLV +L       EG   A+  +  + G  YL    G  LADA  GR   I     +Y +GM    L A+ PA + A C  A    C +  P   A       F GL L+ LG   +K  ++ FGADQ  D    E  +R  FF+W Y+SIN+GA++S
Sbjct:   32 GRRAACGAVLLTELLERAAFYGITSNLVLFLNGAPFCWEG-AQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLAFPLLAA-PATRAALCGSARLLNCTAPGPDAAARCCSPATFAGLVLVGLGVATVKANITPFGADQVKDR-GPEATRR--FFNWFYWSINLGAILS 209          
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: S15A3_HUMAN (Solute carrier family 15 member 3 OS=Homo sapiens GN=SLC15A3 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.938e-17
Identity = 66/190 (34.74%), Postives = 92/190 (48.42%), Query Frame = 3
Query:  183 WR--ACPFILGTECCERLAYYGIATNLVSYLTH-KLHEGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFIGMCTLTLSA----------SIPA--LKPAECVGALCPSATPAQYA--VFFFGLYLIALGTGGIKPCVSSFGADQFDD--TDSNERVKRGSFFHWVYFSINIGALIS 695
            WR  A   +L  E  ER A++G+  NLV YL     +     A R    + G  YL   +G  LAD Y GRY  +A    +Y      L  +A           +PA  L PA C  A CP ++P+ Y   V + GL L+ L    ++  ++SFGADQ  D   D+  R     FF+W Y+SIN+GA++S
Sbjct:   30 WRRAAGAAVLLVEMLERAAFFGVTANLVLYLNSTNFNWTGEQATRAALVFLGASYLLAPVGGWLADVYLGRYRAVALSLLLYLAASGLLPATAFPDGRSSFCGEMPASPLGPA-CPSAGCPRSSPSPYCAPVLYAGLLLLGLAASSVRSNLTSFGADQVMDLGRDATRR-----FFNWFYWSINLGAVLS 213          
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: S15A4_RAT (Solute carrier family 15 member 4 OS=Rattus norvegicus GN=Slc15a4 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.259e-15
Identity = 63/192 (32.81%), Postives = 88/192 (45.83%), Query Frame = 3
Query:  177 GNWRACPFILGTECCERLAYYGIATNLVSYLTHK-LHEGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFIGMCTLTLSASIPALKPAECVG-----------------ALCPSATPAQYA-VFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKRGSFFHWVYFSINIGALIS 695
            G   AC  +L  E  ER A+YG+  NLV +L     +     A++ +  + G  YL    G  LADA  GR   I     +Y +GM    L A+ P  +   C                   A+CP A   + A   F GL L+ LG   +K  ++ FGADQ  D    E  +R  FF+W Y+SIN+GA++S
Sbjct:   23 GRRAACGAVLLAELLERAAFYGVTANLVLFLNGAPFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLAFPLLAA-PRSRSFLCGDPHPELVRNCSAPFPNGTAVCPDAAARRCAPATFAGLVLVGLGVATVKANITPFGADQVKDR-GPEATRR--FFNWFYWSINLGAILS 210          
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: S15A3_RAT (Solute carrier family 15 member 3 OS=Rattus norvegicus GN=Slc15a3 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.112e-14
Identity = 62/190 (32.63%), Postives = 92/190 (48.42%), Query Frame = 3
Query:  183 WR--ACPFILGTECCERLAYYGIATNLVSYLTH-KLHEGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFI--GMCTLTLS--------ASIPAL--KPAECVGALCPSATPAQYAV--FFFGLYLIALGTGGIKPCVSSFGADQFDD--TDSNERVKRGSFFHWVYFSINIGALIS 695
            WR  A   +L  E  ER A++G+ +NLV YL     +     A+R    + G  YL   +G  LAD Y GR+  I+    +Y    G+   T++          +P L  KPA C  A C  +  + Y     +  L L+AL    ++  ++SFGADQ  D   D+  R     FF+W Y+SIN+GA++S
Sbjct:   30 WRRTAAAAVLLVEMLERAAFFGVTSNLVLYLNSLNFNWDGEHASRATLLFLGASYLLAPVGGWLADVYLGRFLAISLSLLLYLAATGLLLTTITDDGRRSFCGEMPELPLKPA-CPSANCQGSWSSPYCATTLYLVLLLLALAASSVRSNLTSFGADQVMDLGRDATRR-----FFNWFYWSINLGAILS 213          
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: S15A3_MOUSE (Solute carrier family 15 member 3 OS=Mus musculus GN=Slc15a3 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.758e-14
Identity = 60/190 (31.58%), Postives = 93/190 (48.95%), Query Frame = 3
Query:  183 WR--ACPFILGTECCERLAYYGIATNLVSYLTH-KLHEGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFI--GMCTLTLS--------ASIPAL--KPAECVGALCPSATPAQYAV--FFFGLYLIALGTGGIKPCVSSFGADQFDD--TDSNERVKRGSFFHWVYFSINIGALIS 695
            WR  A   +L  +  ER A++G+ +NLV YL     +     A+R    + G  YL   +G  LAD Y GR+ TI+    +Y    G+   T++          +P L  +PA C  + C  +  + Y     +  L L+AL    ++  ++SFGADQ  D   D+  R     FF+W Y+SIN+GA++S
Sbjct:   30 WRRTAAAAVLLVQMLERAAFFGVTSNLVLYLNSLNFNWDGQQASRATLLFLGASYLLAPVGGWLADVYLGRFLTISLSLLLYLAASGLLLTTITNDGRRSFCGEMPELPLEPA-CPSSSCQGSWSSPYCATTLYLVLLLLALAASSVRSTLTSFGADQVMDLGRDATRR-----FFNWFYWSINLGAILS 213          
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: S15A4_MOUSE (Solute carrier family 15 member 4 OS=Mus musculus GN=Slc15a4 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14
Identity = 62/191 (32.46%), Postives = 86/191 (45.03%), Query Frame = 3
Query:  177 GNWRACPFILGTECCERLAYYGIATNLVSYLTHKLHEGN-VSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFIGMCTLTLSASI-----------PAL-----KPAECVGALCPSATPAQYA-VFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKRGSFFHWVYFSINIGALIS 695
            G   AC  +L  E  ER A+YG+  NLV +L     +     A++ +  + G  YL    G  LADA  GR   I     +Y +G+    L A+            P L      P     A CP     + A   F GL L+ LG   +K  ++ FGADQ  D    E  +R  FF+W Y+SIN+GA++S
Sbjct:   25 GRRAACGAVLLAELLERAAFYGVTANLVLFLNGAPFDWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGLLAFPLLAAPRSRSFLCGDPRPELVRNCSAPFPNGSASCPENAARRCAPATFAGLVLVGLGVATVKANITPFGADQVKDR-GPEATRR--FFNWFYWSINLGAILS 212          
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: PTR2_SCHPO (Probable peptide transporter ptr2 OS=Schizosaccharomyces pombe GN=ptr2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.788e-13
Identity = 58/192 (30.21%), Postives = 83/192 (43.23%), Query Frame = 3
Query:  183 WRACPFILGTECCERLAYYGIATNLVSYLTH----------KLHEGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFIGMCTLTLSASIPALKPAECVGALCPSATPAQYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKRGS-------------FFHWVYFSINIGAL 689
            W+A   I+  E CER AYYG+     +Y+             L E       N  T+   CY+TP+  A++AD + GRY TI   + IYFIG+  LT +A    +   + +G             F   L +I LGTGGIK  VS   A+Q        + K+                +   Y+SIN+G+L
Sbjct:   83 WKAFIIII-VELCERFAYYGLTVPFQNYMQFGPKDATPGALNLGESGADGLSNFFTFW--CYVTPVGAALIADQFLGRYNTIVCSAVIYFIGILILTCTAIPSVIDAGKSMGG------------FVVSLIIIGLGTGGIKSNVSPLMAEQLPKIPPYVKTKKNGSKVIVDPVVTTSRAYMIFYWSINVGSL 259          
BLAST of DN617862 vs. ExPASy Swiss-Prot
Match: S15A5_HUMAN (Solute carrier family 15 member 5 OS=Homo sapiens GN=SLC15A5 PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 48/164 (29.27%), Postives = 74/164 (45.12%), Query Frame = 3
Query:  201 ILGTECCERLAYYGIATNLVSYLTHKLHEGNVSAARNVTTWQGTCYLTPLIGAVLADAYWGRYWTIAAFSTIYFIGMCTLTLSASIPALKPAECVGALCPSATPAQYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKRGSFFHWVYFSINIGALI 692
            +L  E CER  ++ +  N++ + T KL   N  AA     + GT  LTP+    L D Y GR   +     ++F+G   L++ A            A+       Q+ +F+  L  I LG GG++  V   GA    +  S    K  SFF+W Y+ +N+ A I
Sbjct:   46 LLLVELCERFTFFEVVCNMIPFCTIKLGYHNCQAAILNLCFIGTSILTPVFVRWLTDVYLGRNKLVYICLFLHFLGTALLSVVAFPLEDFYLGTYHAVNNIPKTEQHRLFYVALLTICLGIGGVRAIVCPLGAFGLQEYGSQ---KTMSFFNWFYWLMNLNATI 206          
The following BLAST results are available for this feature:
BLAST of DN617862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
S15A4_BOVIN2.666e-1736.17Solute carrier family 15 member 4 OS=Bos taurus GN... [more]
S15A4_XENLA4.547e-1732.47Solute carrier family 15 member 4 OS=Xenopus laevi... [more]
S15A4_HUMAN4.547e-1737.16Solute carrier family 15 member 4 OS=Homo sapiens ... [more]
S15A3_HUMAN5.938e-1734.74Solute carrier family 15 member 3 OS=Homo sapiens ... [more]
S15A4_RAT3.259e-1532.81Solute carrier family 15 member 4 OS=Rattus norveg... [more]
S15A3_RAT2.112e-1432.63Solute carrier family 15 member 3 OS=Rattus norveg... [more]
S15A3_MOUSE2.758e-1431.58Solute carrier family 15 member 3 OS=Mus musculus ... [more]
S15A4_MOUSE6.145e-1432.46Solute carrier family 15 member 4 OS=Mus musculus ... [more]
PTR2_SCHPO1.788e-1330.21Probable peptide transporter ptr2 OS=Schizosacchar... [more]
S15A5_HUMAN6.359e-1129.27Solute carrier family 15 member 5 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01M15_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617862 ID=DN617862; Name=DN617862; organism=Citrus sinensis; type=EST; length=697bp
CTCTAACTTGCTTCGATCTTTCGTATCCTGAACAGATAAAATTACAGATC
ATGGGATCTATCGAGGAAGAAAGACTGCTCTTGGAAGAAGGAAACATTGA
GAATAAAAGCAGTGGACTGTACACAGGAGATGGCTCTGTAGACATTAGTG
GGAAGCCTGTTCTGAAGCAGAACACTGGAAATTGGAGAGCATGCCCCTTC
ATTTTGGGTACTGAGTGTTGTGAACGCTTGGCCTACTATGGAATCGCAAC
TAATCTTGTTTCTTATCTTACCCACAAACTACACGAAGGAAATGTGTCTG
CTGCAAGAAATGTTACCACCTGGCAAGGCACTTGCTATCTTACACCTCTT
ATTGGAGCTGTCTTAGCTGATGCTTACTGGGGAAGATATTGGACAATTGC
TGCTTTCTCCACAATTTACTTCATTGGAATGTGCACATTGACTCTCTCAG
CCTCAATTCCTGCTCTAAAGCCGGCTGAATGTGTGGGTGCTTTATGCCCT
TCGGCTACTCCAGCTCAGTATGCTGTATTCTTCTTTGGGCTTTATCTGAT
TGCGCTAGGGACTGGTGGGATTAAACCATGTGTTTCATCCTTCGGGGCAG
ATCAGTTTGATGATACTGATTCCAACGAAAGAGTAAAGAGGGGATCCTTC
TTTCACTGGGTTTATTTTTCTATCAACATTGGTGCCCTGATATCTAG
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