DN617858

Overview
NameDN617858
Unique NameDN617858
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length767
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5753 contig Csv1_Contig5753:1..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617858 vs. ExPASy Swiss-Prot
Match: CP6A1_MUSDO (Cytochrome P450 6A1 OS=Musca domestica GN=CYP6A1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.567e-11
Identity = 50/140 (35.71%), Postives = 73/140 (52.14%), Query Frame = -3
Query:  364 EELDRVVG--KERWVEEKDIVNLPFIDAIVKETMRLHPVSP-TLVPRMASEDCKVAG---YDIPKGTRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRD-FELLPFGTGRRICPGMSLGLKVVQSSLANLLHGF 762
            EE++ V    KE  +    ++N+P++D ++ ET+R +PV   + + R    D  V     Y +PKGT V + V  I  DP L+ NP EF P+RF  +   VK RD  + L FG G R C GM  G    +  LA ++  F
Sbjct:  333 EEVNEVFDQFKEDNISYDALMNIPYLDQVLNETLRKYPVGVGSALTRQTLNDYVVPHNPKYVLPKGTLVFIPVLGIHYDPELYPNPEEFDPERFSPEM--VKQRDSVDWLGFGDGPRNCIGMRFGKMQSRLGLALVIRHF 470          
BLAST of DN617858 vs. ExPASy Swiss-Prot
Match: CP191_CARAU (Cytochrome P450 19 type 1 OS=Carassius auratus GN=cyp19a1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.567e-11
Identity = 43/134 (32.09%), Postives = 72/134 (53.73%), Query Frame = -3
Query:  361 EELDRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFS 762
            +E+   +G ER VE  D+  L  ++  +KE++R HPV    + R A ED ++ GY + KGT +++N+  + +    ++ PNEF  + F      V  R F+  PFG G R C G  + + + ++ L  LL  F+
Sbjct:  332 QEIQSQIG-ERDVESADLQKLNVLERFIKESLRFHPV-VDFIMRRALEDDEIDGYRVAKGTNLILNIGRMHKS-EFFQKPNEFNLENF---ENTVPSRYFQ--PFGCGPRACVGKHIAMVMTKAILVTLLSRFT 457          
BLAST of DN617858 vs. ExPASy Swiss-Prot
Match: CP4S3_DROME (Probable cytochrome P450 4s3 OS=Drosophila melanogaster GN=Cyp4s3 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11
Identity = 36/121 (29.75%), Postives = 64/121 (52.89%), Query Frame = -3
Query:  364 VEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGF 726
            +E ++  ++P+++A++KET+R++P  P    R   ED +V    +PKG  +   ++ + RDP  + +P  F P RFL    + +   F    F  G R C G    +  +++SLA LL  +
Sbjct:  340 LEGREKESMPYLEAVIKETLRIYPSVP-FFSRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFLVN--EKQMHPFAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSY 457          
BLAST of DN617858 vs. ExPASy Swiss-Prot
Match: C2G1L_HUMAN (Putative cytochrome P450 2G1-like protein OS=Homo sapiens PE=5 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11
Identity = 36/114 (31.58%), Postives = 60/114 (52.63%), Query Frame = -3
Query:  361 LPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPALWENPNEFYPQRFLGKSIDVKGRDFELLPFGTGRRICPGMSLGLKVVQSSLANLLHGFS 702
            +P+ D ++ E  RL  + P  VP    +D +  GY +PKGT V   + ++ +DP  +  P+ FYPQ FL +    K ++   +PF +G+RIC G ++    +     + L  FS
Sbjct:    1 MPYTDVVIHEIQRLVDIVPMGVPHNIIQDTQFRGYLLPKGTDVFPLLGSVLKDPKYFRYPDAFYPQHFLDEQGRFK-KNEAFVPFSSGKRICLGEAMARMELFLYFTSTLQNFS 113          
The following BLAST results are available for this feature:
BLAST of DN617858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 494
Match NameE-valueIdentityDescription
CP6A1_MUSDO7.567e-1135.71Cytochrome P450 6A1 OS=Musca domestica GN=CYP6A1 P... [more]
CP191_CARAU7.567e-1132.09Cytochrome P450 19 type 1 OS=Carassius auratus GN=... [more]
CP4S3_DROME9.883e-1129.75Probable cytochrome P450 4s3 OS=Drosophila melanog... [more]
C2G1L_HUMAN9.883e-1131.58Putative cytochrome P450 2G1-like protein OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01M13_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617858 ID=DN617858; Name=DN617858; organism=Citrus sinensis; type=EST; length=767bp
TTTTTTTTTTTTTTTTTAAAATATCACCACTAACAAAGTTCATTATTTAA
AAGGCACAATATCTAAGCCCAAAAAGATTACGTTGGCTAGGGTACACTGG
CTCTCGTTATATCTTCAAATTCAGGACCATGTTCGCACTAGCAAACCAAA
GCAAGACCATCAAGAAGCGCTTATTCAAAATATATTAAAAGCGAACCAAG
CCATAATTAGTTCTTTTGGATGCCAGAATCACAGACTATAAAGATGGAAT
GAAAGCCTTGGCTGAGCCACGACTTCAAGCGGAAATTTTTTCGGAGTGGA
AAGGCCAAAAGTTTCCTCCATATTAAGCTCCTGATTGCTCATATTTCCAG
GCAATTTCCATGAAAATCCATGTAAAAGATTAGCCAAACTTGATTGAACA
ACCTTAAGCCCTAGACTCATCCCTGGGCAAATTCTTCTTCCTGTACCAAA
AGGCAGCAACTCAAAATCACGCCCTTTCACATCAATTGATTTTCCAAGGA
ACCTCTGAGGGTAAAATTCATTAGGATTTTCCCACAAAGCAGGGTCTCTC
CCTATCGTCCATACATTAACTAGGACTCGGGTGCCTTTAGGGATGTCGTA
GCCGGCAACTTTGCAATCTTCACTAGCCATTCTTGGCACCAGTGTTGGAG
ACACCGGGTGTAGACGCATTGTTTCTTTAACTATGGCGTCGATGAATGGG
AGATTAACGATATCTTTCTCTTCAACCCATCTTTCTTTTCCGACTACTCT
ATCTAGTTCTTCGGTTG
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