DN617857

Overview
NameDN617857
Unique NameDN617857
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13555 contig Csv1_Contig13555:15..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.247e-20
Identity = 48/127 (37.80%), Postives = 70/127 (55.12%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNL 516
            PPGP   PI+GNL+ +  + +R +H LS+K+GP+M L+            E AE  LKTHD     RP   A +  + N  NI    Y   WR+LRK+ + E F+ K++ S+ Y+R EE  L ++ L
Sbjct:   33 PPGPAKLPIVGNLHQLQGMVHRCLHELSKKHGPVMHLQLGFVPLVLISSSEAAEEALKTHDIECCTRPNTNAARVFSRNNKNIGLGAYSDEWRELRKVAVREYFSVKKVQSFRYVREEENHLMVKKL 159          
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.247e-20
Identity = 49/119 (41.18%), Postives = 70/119 (58.82%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEE 492
            PPGP   PIIGNL+ +G  P+ S+  LSEKYGP+M L+            E  +  LKT DA    RP +      T+N  +I +  Y  YWR++RK+ ++EL+TAKR+ S+++ R EE
Sbjct:   30 PPGPPRLPIIGNLHQLGSKPHSSMFKLSEKYGPLMALRFGSVSTVVASTPETVKEVLKTFDAECCSRPYMTYPARLTYNLKDIGFCPYTKYWREVRKMTVVELYTAKRVQSFQHTRKEE 148          
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.247e-20
Identity = 52/131 (39.69%), Postives = 75/131 (57.25%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS 528
            PPGP   PIIGNL+ +G L + S H LS ++GP+M L+            E A+  LK+ D     RPKL A    T N+ +I ++QYG  WR+++K+  +ELF  K+   + YIR EE  L ++ L +SS
Sbjct:   31 PPGPTGLPIIGNLHQLGRLLHSSFHKLSLEHGPVMLLRFGVVPMVVISSKEAAKQVLKSRDLETCSRPKLVANGLFTRNFKDIAFAQYGEDWREMKKLVGLELFNPKKHKFFRYIREEEGDLLVKKLSKSS 161          
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.247e-20
Identity = 51/159 (32.08%), Postives = 80/159 (50.31%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYES-SGXXXXXXXXXXXXXXEVMSRMVLGKKY 609
            PP P+  PIIGNL+ +G  P+RS+  LS+KYGP+M L             + A   LKTHD +++ RPK +      +   ++ +S +G YW Q+R I ++ L + KR+ SY  +R EET   +  + +                   + SR+ LG+ Y
Sbjct:   37 PPSPRKLPIIGNLHQLGSHPHRSLRKLSQKYGPVMLLHLGSKPVIVASSVDAARDILKTHDHVWATRPKYSIADSLLYGSKDVGFSPFGEYWWQVRSIVVLHLLSNKRVQSYRDVREEETANMIEKIRQGCDASVINLGEHLCFLTNNITSRVALGRTY 195          
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.077e-19
Identity = 48/166 (28.92%), Postives = 86/166 (51.81%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS------GXXXXXXXXXXXXXXEVMSRMVLGKKYTN 615
            PPGP+PWP++GNL  I P+  R     +E+YGP++ +             E+A+  LK +D   + RP+  + +  + N  ++ W+ YGP++ ++RK+C +ELFT KRL +   IR +E    + ++Y ++      G                ++R+  GK++ N
Sbjct:   32 PPGPRPWPVLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRFMN 197          
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.077e-19
Identity = 49/130 (37.69%), Postives = 77/130 (59.23%), Query Frame = 1
Query:  139 PGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS 528
            P P  +PIIGNL+ +G L ++S+  LS+KYGP+M LK            E A+  L+ +D     RP LA G+  ++N  +++ S Y  YW++LRK+C  ELF+A ++ S + I+ EE    + ++ ESS
Sbjct:   33 PSPPGFPIIGNLHQLGELQHQSLWKLSKKYGPVMLLKLGKVPTLILSSSETAKQALRDYDLHCCSRPSLAGGRELSYNNLDMSSSPYNEYWKELRKLCSQELFSANKIQSIQPIKDEEVKKVIDSIAESS 162          
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.407e-19
Identity = 47/130 (36.15%), Postives = 73/130 (56.15%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYES 525
            PPGP  WP++G L L+G +P+ ++  +++KYGP+M LK            E A+AFLKT D  FS RP  A   +  +N  ++ ++ YGP W+ LRK+  + +   K L  +E +R +E    L  + ES
Sbjct:   38 PPGPIGWPVLGALRLLGTMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYMLYAMAES 167          
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.399e-19
Identity = 51/162 (31.48%), Postives = 88/162 (54.32%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRP-KLAAGKYTTFNYSN--ITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYES--SGXXXXXXXXXXXXXXEVMSRMVLGKK 606
            PP PK  PIIG+L+L+ P+P++  + LS ++GPIMQL             E A+ FLKTH+  FS RP +  A K   ++  +    ++ +GPYW+ ++K+C+ EL + + ++ +  +R +ET  F+  ++    +G               ++SRM L +K
Sbjct:   30 PPSPKALPIIGHLHLVSPIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVKGLAYDSQDFLFAFAPFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQETKRFISRVFRKGVAGEAVDFGDELMTLSNNIVSRMTLSQK 191          
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.399e-19
Identity = 47/130 (36.15%), Postives = 73/130 (56.15%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYES 525
            PPGP  WP++G L L+G +P+ ++  +++KYGP+M LK            E A+AFLKT D  FS RP  A   +  +N  ++ ++ YGP W+ LRK+  + +   K L  +E +R +E    L  + ES
Sbjct:   38 PPGPIGWPVLGALPLLGTMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYMLYAMAES 167          
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.399e-19
Identity = 49/157 (31.21%), Postives = 80/157 (50.96%), Query Frame = 1
Query:  139 PGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESSGXXXXXXXXXXXXXXEVMSRMVLGKKY 609
            P P   P+IGNL+ +   P+RS+  LS +YGP+M L             E A   LKTHD +F+ RP+    +   +   N+  + YG YWRQ++ + ++ L + K + S++ +R EE  L +  + +SS               +V+ R+ LG+KY
Sbjct:   31 PSPPRLPLIGNLHQLSQHPHRSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKSSSKPVNLSKILSSLTNDVICRVALGRKY 187          
The following BLAST results are available for this feature:
BLAST of DN617857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
C71BP_ARATH8.247e-2037.80Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71BB_ARATH8.247e-2041.18Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C71B8_ARATH8.247e-2039.69Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C71A4_SOLME8.247e-2032.08Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C98A1_SORBI1.077e-1928.92Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71BQ_ARATH1.077e-1937.69Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C75A7_EUSGR1.407e-1936.15Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C93A1_SOYBN2.399e-1931.48Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C75A5_EUSGR2.399e-1936.15Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71AN_ARATH2.399e-1931.21Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01M13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617857 ID=DN617857; Name=DN617857; organism=Citrus sinensis; type=EST; length=633bp
ACCAGTAAACTGAGCTAATGTTTACTANCAATGGAGCTCATTCATCACTC
TTGGGCTTATTACTTGGCCGCATGGTTAGCAACCCTAGCCCTCATACTCC
TCTCCCTCCGTCTTCGCCGCCGGGAACTCAACTTACCGCCTGGCCCAAAG
CCATGGCCGATCATCGGAAACCTCAACCTCATAGGCCCACTTCCATATCG
GTCCATCCATGCTCTGTCCGAAAAATATGGGCCTATCATGCAACTCAAAT
TCGGATCATTCCCCGTTGTTGTGGGATCTTCCGTTGAGATGGCGGAGGCT
TTCCTTAAAACCCACGACGCTCTGTTTTCTTACCGGCCCAAACTGGCCGC
AGGTAAGTACACAACCTTCAATTACTCAAATATTACATGGTCACAATACG
GACCATACTGGCGTCAATTACGTAAAATATGCTTGATGGAATTGTTTACT
GCTAAACGCCTCAACTCATATGAATACATAAGAGTAGAAGAAACGATGTT
GTTTCTCAGAAACTTGTATGAATCATCTGGCAAGCCTATTATATTGAAGG
ATAATCTTTTAGATTTGAATCTTGAAGTTATGAGCCGTATGGTTTTAGGG
AAAAAATACACAAATGAGATTGTGGCACGACAT
back to top