DN617857

Overview
NameDN617857
Unique NameDN617857
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13555 contig Csv1_Contig13555:15..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.116e-15
Identity = 43/133 (32.33%), Postives = 69/133 (51.88%), Query Frame = 1
Query:  136 PPGPKPWPIIGNL-NLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESSG 531
            PPGP   P++G L +L+   P  ++  L+ KYGP+M L+              A+  L+  D  F+ RP L   +   +   +I ++ YG YWR LRK+C +EL + K +     IR  ET+  +RN+  ++G
Sbjct:   36 PPGPWNLPLVGGLLHLLRSQPQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNIEAAAG 168          
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 6.116e-15
Identity = 47/164 (28.66%), Postives = 78/164 (47.56%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLNLIGPL-PYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEET--MLFLRNLYESSGXXXXXXXXXXXXXXEVMSRMVLGKKYTNE 618
            PPGP P P+IGNL  +  L P R     ++KYGPI+  +            E+A+  LKT D  F+ RP     ++ ++   ++  + Y PY+R++RK+ +  LF+  R+ +++++R EE   M+   N                     V+ R   GKKY  +
Sbjct:   31 PPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFGKKYNED 194          
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.116e-15
Identity = 41/133 (30.83%), Postives = 74/133 (55.64%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLNLI-GPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESSG 531
            PPGP   P++G+L+L+ G LP  ++  +++KYGP+  ++            E  +  +K  D   + R +    +   ++  +I +S Y  +WRQ+RKIC+ EL +A+ + S+ +IR +E    LR+L  S+G
Sbjct:   35 PPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAG 167          
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.116e-15
Identity = 41/133 (30.83%), Postives = 74/133 (55.64%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLNLI-GPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESSG 531
            PPGP   P++G+L+L+ G LP  ++  +++KYGP+  ++            E  +  +K  D   + R +    +   ++  +I +S Y  +WRQ+RKIC+ EL +A+ + S+ +IR +E    LR+L  S+G
Sbjct:   35 PPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAG 167          
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.043e-14
Identity = 40/133 (30.08%), Postives = 75/133 (56.39%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLNLI-GPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESSG 531
            PPGP   P+IG+L+L+ G LP  ++ +++++YGP+  ++            E  +  +K  D   + R +    +   ++  +I +S Y  +WRQ+RKIC+ EL +++ + S+ +IR +E    LR+L  S+G
Sbjct:   36 PPGPPKLPLIGHLHLLWGKLPQHALASVAKEYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACANRFESIGTRIMWYDNEDIIFSPYSEHWRQMRKICVSELLSSRNVRSFGFIRQDEVSRLLRHLRSSAG 168          
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.324e-14
Identity = 37/116 (31.90%), Postives = 61/116 (52.59%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIR 483
            PPGP   PI GN+  +G  PY+ +  L +KYGP++ LK            + +E   K HD  F+ R      +  ++   ++  + YGP+WR  R+IC +E+F  K+++  E +R
Sbjct:   36 PPGPPGLPIFGNMFELGTEPYKKMAVLRQKYGPVLWLKLGSTYTMVVQTAQASEELFKNHDISFANRVIPDVNQAHSYYQGSLAIAPYGPFWRFQRRICTIEMFVHKKISETEPVR 151          
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.964e-14
Identity = 42/133 (31.58%), Postives = 69/133 (51.88%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLNLI-GPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESSG 531
            PP P   P+IG+L+ + G LP     ++++KYGP+  ++            E A+  +K  D  F+ R      +   ++  +I +S Y  +WRQ+R+IC+ EL + K + S+ YIR EE    +R L  S G
Sbjct:   35 PPSPPKLPVIGHLHFLWGGLPQHVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLLGSSGG 167          
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.964e-14
Identity = 42/133 (31.58%), Postives = 69/133 (51.88%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLNLI-GPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESSG 531
            PP P   P+IG+L+ + G LP     ++++KYGP+  ++            E A+  +K  D  F+ R      +   ++  +I +S Y  +WRQ+R+IC+ EL + K + S+ YIR EE    +R L  S G
Sbjct:   35 PPSPPKLPVIGHLHFLWGGLPQHVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLLGSSGG 167          
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.762e-14
Identity = 42/132 (31.82%), Postives = 68/132 (51.52%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITW-SQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS 528
            PPGP   PIIGN++L+G  P+RS   LS+ YGP+M LK            E A   L+THD + S R    A +      +++ W       WR LR++ + +L + +R+ + + +R+ +    +  + ESS
Sbjct:   39 PPGPPRLPIIGNIHLVGKHPHRSFAELSKTYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSINHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIEATKALRMNKVKELVSFISESS 170          
BLAST of DN617857 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.153e-13
Identity = 40/132 (30.30%), Postives = 73/132 (55.30%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLNLI-GPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS 528
            PPGP   P+IG+L+L+ G LP  ++ +++++YGP+  ++            E  +  +K  D   + R +    K   ++  +I +S Y  +WRQ+RKIC+ EL +A+ + S+ +IR +E    L +L  S+
Sbjct:   36 PPGPPKLPLIGHLHLLWGKLPQHALASVAKQYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACADRFESIGTKIMWYDNDDIIFSPYSVHWRQMRKICVSELLSARNVRSFGFIRQDEVSRLLGHLRSSA 167          
The following BLAST results are available for this feature:
BLAST of DN617857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
C99A3_ORYSJ6.116e-1532.33Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C83A1_ARATH6.116e-1528.66Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C7D95_MENSP6.116e-1530.83Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D95_MENGR6.116e-1530.83Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71DF_MENPI1.043e-1430.08Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C76A2_SOLME2.324e-1431.90Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C71DI_MENSP3.964e-1431.58Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR3.964e-1431.58Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C76C1_ARATH6.762e-1431.82Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C71DD_MENPI1.153e-1330.30Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01M13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617857 ID=DN617857; Name=DN617857; organism=Citrus sinensis; type=EST; length=633bp
ACCAGTAAACTGAGCTAATGTTTACTANCAATGGAGCTCATTCATCACTC
TTGGGCTTATTACTTGGCCGCATGGTTAGCAACCCTAGCCCTCATACTCC
TCTCCCTCCGTCTTCGCCGCCGGGAACTCAACTTACCGCCTGGCCCAAAG
CCATGGCCGATCATCGGAAACCTCAACCTCATAGGCCCACTTCCATATCG
GTCCATCCATGCTCTGTCCGAAAAATATGGGCCTATCATGCAACTCAAAT
TCGGATCATTCCCCGTTGTTGTGGGATCTTCCGTTGAGATGGCGGAGGCT
TTCCTTAAAACCCACGACGCTCTGTTTTCTTACCGGCCCAAACTGGCCGC
AGGTAAGTACACAACCTTCAATTACTCAAATATTACATGGTCACAATACG
GACCATACTGGCGTCAATTACGTAAAATATGCTTGATGGAATTGTTTACT
GCTAAACGCCTCAACTCATATGAATACATAAGAGTAGAAGAAACGATGTT
GTTTCTCAGAAACTTGTATGAATCATCTGGCAAGCCTATTATATTGAAGG
ATAATCTTTTAGATTTGAATCTTGAAGTTATGAGCCGTATGGTTTTAGGG
AAAAAATACACAAATGAGATTGTGGCACGACAT
back to top