DN617854

Overview
NameDN617854
Unique NameDN617854
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:143..772. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.127e-21
Identity = 58/142 (40.85%), Postives = 80/142 (56.34%), Query Frame = 3
Query:  195 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLT---ADV-LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDC 608
            F  +  ++ KIY++++E   RF  F  NL  I  TN K  SY LGLN FAD S +EF+    G+      TT+ +++      DV +PE  DWR+ G V+PVK+QG CGSCW FS   ++E       G     SEQ+L+DC
Sbjct:   48 FESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDC 189          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.473e-21
Identity = 59/149 (39.60%), Postives = 81/149 (54.36%), Query Frame = 3
Query:  195 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG----LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTA---DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAF 620
            +A +   +GK Y +V E + R+A F  NL  I   N        S+RLGLN+FAD + EE++   LG         K + +  A   + LPE+ DWR  G V+ +KDQG CGSCW FS   ++E       G  ISLSEQ+LVDC  ++
Sbjct:   40 YAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSY 188          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.473e-21
Identity = 57/138 (41.30%), Postives = 82/138 (59.42%), Query Frame = 3
Query:  237 VEEMKLRFATFSKNLDLI--RSTNCKGLSYRLGLNKFADWSWEEFQRHRLGA----AQNCSATTKGNHKLTADV----LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAF 620
            + +   RF  F  NL  I   + + K  +Y+LGL KF D + +E+++  LGA    A+  +     N K +A V    +PET DWR+ G V+P+KDQG CGSCW FSTT ++E       G+ ISLSEQ+LVDC +++
Sbjct:   67 INDQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSY 204          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.473e-21
Identity = 67/166 (40.36%), Postives = 86/166 (51.81%), Query Frame = 3
Query:  147 ETSVLQVIGQARHALS--FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAF 620
            + +VL + G A  A S  +  F  +YG+ Y   EE   R   F +N   I   N K     +++ L +NKF D + EEF     G     SA     +  K T     E  DWR  G V+PVKDQG CGSCW FSTTGSLE  +    G  ISL+EQQLVDC++ +
Sbjct:    2 KVAVLFLCGVALAAASPSWEHFKGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAVMKGNIPRRSAPVSVFYPKKETGPQATEV-DWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPY 166          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.473e-21
Identity = 61/154 (39.61%), Postives = 82/154 (53.25%), Query Frame = 3
Query:  192 SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHK--------LTADVLPETK--DWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA 611
            S+  F  ++G+ Y  +EE + R   F  NL  I   N K     ++Y L +N+F+D + E+F           +A  KG  K         + D  PE+   DWR  G V+PVKDQG CGSCW FSTTG +E  +    G+ +SLSEQQLVDCA
Sbjct:   19 SWEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKF-----------NAVMKGYKKGPRPAAVFTSTDAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDCA 161          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.923e-21
Identity = 60/149 (40.27%), Postives = 85/149 (57.05%), Query Frame = 3
Query:  195 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLS---YRLGLNKFADWSWEEFQRHRLGAAQNCSATTK-GNHKL-----TADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQ 614
            F  +   +G++Y + EE   R   F  N + IR  N    S   +RLGLNKFAD + +EF +  L A ++ S   K  N K+     + D  P + DWR+ G+++ VK QG CG  W FS TG++EAA+  A G  +SLSEQ+LVDC +
Sbjct:   44 FQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQEFSKKYLQAPKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDCVE 192          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21
Identity = 58/155 (37.42%), Postives = 84/155 (54.19%), Query Frame = 3
Query:  162 QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKG--ISLSEQQLVDCAQAF 620
            Q + +  +  +F  +   + + Y S EE   R+  F  N+D +   N KG    LGLN FAD S EE++   LG   + S+          D   +  DWR  G V+P+K+QG CG CW+FSTTG+ E A + A GK   +SLSEQ L+DC+ ++
Sbjct:   19 QQLSEVEYRNAFTNWMIAHQRHYSS-EEFNGRYNIFKANMDYVNEWNTKGSETVLGLNVFADISNEEYRATYLGTPFDASSLEMTESDKIFDASAQV-DWRTQGAVTPIKNQGQCGGCWSFSTTGATEGAQYLANGKKNLVSLSEQNLIDCSGSY 171          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.280e-21
Identity = 57/142 (40.14%), Postives = 74/142 (52.11%), Query Frame = 3
Query:  213 RYGKIYESVEEMKLRFATFSKNLDLIRSTNCK-GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFTTR 629
            +YGK Y S+ E + RF  F + L  I   N     SY++GLN+FAD + EEF+   LG     + T   N        VLP   DWR +G V  +K QG CG CW FS   ++E       G  ISLSEQ+L+DC +   TR
Sbjct:   48 KYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKTKVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR 189          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21
Identity = 58/156 (37.18%), Postives = 86/156 (55.13%), Query Frame = 3
Query:  162 QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKG-NHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKG--ISLSEQQLVDCAQAF 620
            Q + + ++  +F  +   + + Y S EE   RF  F  N+D I   N KG    LGLN FAD + EE++   LG   + S+     + K+   V   + DWR  G V+P+K+QG CG CW+FS TG+ E A + A G     S+SEQQL+DC+ ++
Sbjct:   19 QQLSELQYRNAFTNWMIAHQRHYSS-EEFNGRFNIFKANMDYINEWNTKGSETVLGLNVFADITNEEYRATYLGTPFDASSLEMTPSEKVFGGVQANSVDWRAKGAVTPIKNQGECGGCWSFSATGATEGAQYIANGDSDLTSVSEQQLIDCSGSY 173          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21
Identity = 52/146 (35.62%), Postives = 84/146 (57.53%), Query Frame = 3
Query:  195 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK-GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTK---GNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAF 620
            F  +   YG++Y+  +E  LRF  F  N++ I + N + G SY LG+N+F D +  EF     G +   +   +       +    +P++ DWR+SG V+ VK+QG CGSCW F++  ++E+ Y    G  +SLSEQQ++DCA ++
Sbjct:   37 FEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLSLPLNIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDCAVSY 182          
The following BLAST results are available for this feature:
BLAST of DN617854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
PAPA1_CARPA1.127e-2140.85Papain OS=Carica papaya PE=1 SV=1[more]
ORYA_ORYSJ1.473e-2139.60Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
GCP1_ARATH1.473e-2141.30Germination-specific cysteine protease 1 OS=Arabid... [more]
CYSP2_HOMAM1.473e-2140.36Digestive cysteine proteinase 2 OS=Homarus america... [more]
CYSP1_HOMAM1.473e-2139.61Digestive cysteine proteinase 1 OS=Homarus america... [more]
P34_SOYBN1.923e-2140.27P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CYSP7_DICDI2.512e-2137.42Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]
ACTN_ACTDE3.280e-2140.14Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
CYSP6_DICDI9.545e-2137.18Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
ANAN_ANACO9.545e-2135.62Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01M11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617854 ID=DN617854; Name=DN617854; organism=Citrus sinensis; type=EST; length=630bp
AATCATTAGGCATGGCTCGCCCCGTACAGTTGGTCTCGTCCGTCATCTTG
TTGCTTTGCTGCGCTGCCGCAGCATCAGCATCAGCATCAAGCTTCGACGA
CTCCAATCCGATCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGA
CCTCCGTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTCTCTCCTTTGCC
CGTTTTGCTCGCAGGTATGGGAAGATTTACGAGTCCGTTGAGGAGATGAA
GCTCCGGTTCGCGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACCA
ATTGTAAAGGCCTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGACTGG
AGCTGGGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCGCAAAACTGCTC
TGCCACTACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAA
CGAAAGACTGGAGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGT
CACTGTGGATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGC
TTACCACCAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTG
TAGACTGTGCCCAAGCTTTCACAACCAGGG
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