DN617854

Overview
NameDN617854
Unique NameDN617854
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:143..772. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CYSP_PLAFA (Trophozoite cysteine proteinase OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.362e-17
Identity = 53/175 (30.29%), Postives = 86/175 (49.14%), Query Frame = 3
Query:  168 IGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNC--KGLSYRLGLNKFADWSWEE----------------------FQRHRLGAAQNCSATTKG--NHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQ 614
            I   ++A  F +F + + K+Y++++E   +F  F  N   I++ N   K   Y+  +N+F+D+S EE                      F+ H           T G  N K     +PE  D+RE GIV   KDQG CGSCW F++ G++E+ + +     +S SEQ++VDC++
Sbjct:  216 INNIKYASKFFKFMKEHNKVYKNIDEQMRKFEIFKINYISIKNHNKLNKNAMYKKKVNQFSDYSEEELKEYFKTLLHVPNHMIEKYSKPFENHLKDNILISEFYTNGKRNEKDIFSKVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNIESVFAKKNKNILSFSEQEVVDCSK 390          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.362e-17
Identity = 51/146 (34.93%), Postives = 71/146 (48.63%), Query Frame = 3
Query:  189 LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQN------CSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDC 608
            L F +F  +Y K Y+S +E K R+  F  N++ I   N +  S    +N+FAD    E      G A        C               P + DWR    ++ VKDQG CG+CW F++ G+LE+ Y   + + I LSEQQLVDC
Sbjct:   38 LYFEKFITQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMPKNEIVIRHTGLASGELGLNFCETIVVDGPAQRQR--PVSFDWRSMNKITSVKDQGMCGACWRFASLGALESQYAIKYDRLIDLSEQQLVDC 181          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.362e-17
Identity = 51/146 (34.93%), Postives = 70/146 (47.95%), Query Frame = 3
Query:  195 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL--------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDC 608
            F  F  +Y K+Y+  +E + RF  F +NL  I + N    S    +N  AD S  E  +   G   +     K N   T  V+        P++ DWR+   V+ VK Q  CGSCW FS   ++E+ YH      + LSEQQLVDC
Sbjct:   43 FNEFVVKYNKVYKDDQEKEARFEIFKQNLADINARNALEDSAMFEINSRADISSNELLQKLTGLKLSLMRGEKKNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDC 188          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 1.426e-16
Identity = 43/99 (43.43%), Postives = 57/99 (57.58%), Query Frame = 3
Query:  315 SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA 611
            S+ + +N F D + EEF++   G         K   +     +P + DWRE G ++PVKDQG CGSCW FS TG+LE       GK ISL+EQ LVDC+
Sbjct:   15 SFTMAMNAFGDMTNEEFRQVMNGFQYQKHRKGKQFQERLLPEIPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCS 113          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.863e-16
Identity = 56/144 (38.89%), Postives = 74/144 (51.39%), Query Frame = 3
Query:  210 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLNKFADWSWEE----FQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQA 617
            + YGK Y+   E   R   + KNL  +   N +   G+ SY LG+N   D + EE        R+ +    + T K +       LP++ DWRE G V+ VK QG CGSCW FS  G+LEA      GK +SLS Q LVDC+ A
Sbjct:   33 KTYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISLMSSLRVPSQWPRNVTYKSDPN---QKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTA 173          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 5.420e-16
Identity = 55/138 (39.86%), Postives = 78/138 (56.52%), Query Frame = 3
Query:  222 KIYESVEEMKLRFATFSKNLDLIRSTNCKGLS----YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN---HKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQ 614
            ++Y + EE   R A + KN+ +I   N +       + + +N F D + EEF R  +G  +N     KG      L  D LP++ DWR+ G V+PVK+Q  CGSCW FS TG+LE    +  GK +SLSEQ LVDC++
Sbjct:   38 RLYGANEE-GWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEF-RQMMGCFRN-QKFRKGKVFREPLFLD-LPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR 171          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 5.420e-16
Identity = 52/134 (38.81%), Postives = 75/134 (55.97%), Query Frame = 3
Query:  222 KIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLG----LNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA 611
            ++Y + EE + R A + KN+ +I+  N +  + + G    +N F D + EEF++   G         +   +     +P+T DWRE G V+PVK+QG CGSCW FS +G LE       GK ISLSEQ LVDC+
Sbjct:   38 RLYGTNEE-EWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGRLFQEPLMLQIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCS 170          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.078e-16
Identity = 54/140 (38.57%), Postives = 75/140 (53.57%), Query Frame = 3
Query:  210 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLNKFADWSWEEFQRHRLGAAQ--NCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA 611
            + + K Y+   E ++R   + KNL  I   N +   G+ +Y++G+N   D + EE    R+GA +    S  T      +   LP+T DWRE G V+ VK QG CG+CW FS  G+LE       GK ISLS Q LVDC+
Sbjct:   41 KTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEISC-RMGALRISRQSPKTVTFRSYSNRTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCS 179          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 7.078e-16
Identity = 51/136 (37.50%), Postives = 76/136 (55.88%), Query Frame = 3
Query:  222 KIYESVEEMKLRFATFSKNLDLIRSTNCKGLS----YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQA 617
            ++Y + EE + R A + KN+ +I+  N +  +    + + +N F D + EEF++   G         +   +     +P++ DWRE G V+PVK+QG CGSCW FS +G LE       GK ISLSEQ LVDC+ A
Sbjct:   38 RLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHA 172          
BLAST of DN617854 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.078e-16
Identity = 36/57 (63.16%), Postives = 44/57 (77.19%), Query Frame = 3
Query:  444 PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQ 614
            P + DWRE G V+PVKDQG CGSCW FSTTG+LE  + +  GK +SLSEQ LVDC++
Sbjct:    2 PRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSR 58          
The following BLAST results are available for this feature:
BLAST of DN617854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
CYSP_PLAFA8.362e-1730.29Trophozoite cysteine proteinase OS=Plasmodium falc... [more]
CATV_NPVSE8.362e-1734.93Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]
CATV_GVXN8.362e-1734.93Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATL6_HUMAN1.426e-1643.43Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CATS_BOVIN1.863e-1638.89Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATL2_HUMAN5.420e-1639.86Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CATL1_RAT5.420e-1638.81Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CATS_MOUSE7.078e-1638.57Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATL1_MOUSE7.078e-1637.50Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CATL1_CHICK7.078e-1663.16Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01M11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617854 ID=DN617854; Name=DN617854; organism=Citrus sinensis; type=EST; length=630bp
AATCATTAGGCATGGCTCGCCCCGTACAGTTGGTCTCGTCCGTCATCTTG
TTGCTTTGCTGCGCTGCCGCAGCATCAGCATCAGCATCAAGCTTCGACGA
CTCCAATCCGATCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGA
CCTCCGTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTCTCTCCTTTGCC
CGTTTTGCTCGCAGGTATGGGAAGATTTACGAGTCCGTTGAGGAGATGAA
GCTCCGGTTCGCGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACCA
ATTGTAAAGGCCTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGACTGG
AGCTGGGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCGCAAAACTGCTC
TGCCACTACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAA
CGAAAGACTGGAGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGT
CACTGTGGATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGC
TTACCACCAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTG
TAGACTGTGCCCAAGCTTTCACAACCAGGG
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