DN617853

Overview
NameDN617853
Unique NameDN617853
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length617
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:907..1522. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.017e-17
Identity = 50/116 (43.10%), Postives = 69/116 (59.48%), Query Frame = -1
Query:  273 NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVVA*SAPE 602
            ++   +E++L  AV   +PVSVA E     F FY  GV++  +CG    +++H V  VGYGV EDG  YW +KNSWG +WG+ GY ++E        +CGIA  ASYPV   S P+
Sbjct:  250 DVPANSEEDLARAVAN-QPVSVAVEASGKAFMFYSEGVFTG-ECGT---ELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKTYSKPK 360          
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 8.017e-17
Identity = 46/109 (42.20%), Postives = 63/109 (57.80%), Query Frame = -1
Query:  294 NITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 602
            N+    ED L  AV   +PVSVA +     F+FY  GV++    G+   D+NH V  VGYG   DG  YW+++NSWG  WG+HGY +M+      + +CGIA   SYP+
Sbjct:  241 NVPANDEDALLKAVAN-QPVSVAIDAGGSDFQFYSEGVFT----GDCSTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEHGYIRMQRNISKKEGLCGIAMLPSYPI 344          
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 87.0409 bits (214), Expect = 8.017e-17
Identity = 48/107 (44.86%), Postives = 62/107 (57.94%), Query Frame = -1
Query:  294 NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM---GKNMCGIATCASYPV 602
            N+    E  LQ AV   +PVSVA +   D F+ Y SG+++   CG     V+HAV  VGYG E G+ YW++KNSW   WG+ GY ++     G   CGIAT  SYPV
Sbjct:  241 NVPYNNEWALQTAV-TYQPVSVALDAAGDAFKQYSSGIFTGP-CGTA---VDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 342          
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 8.017e-17
Identity = 48/110 (43.64%), Postives = 62/110 (56.36%), Query Frame = -1
Query:  297 VLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSG-VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-GKNMCGIATCASYP 617
            V  S  +T G+E  LQ  +    PV+V  +     F+ YK G +YS TKC +  M  NH V AVGYG      YW+I+NSWG +WGD GYF +     NMCGI   ++YP
Sbjct:  195 VTGSRRVTDGSETGLQTIIAENGPVAVGMDASRPSFQLYKKGTIYSDTKCRSRMM--NHCVTAVGYGSNSNGKYWIIRNSWGTSWGDAGYFLLARDSNNMCGIGRDSNYP 302          
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.047e-16
Identity = 47/104 (45.19%), Postives = 59/104 (56.73%), Query Frame = -1
Query:  291 EDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 584
            E  L  AV  V P+SVA +      +FY SG+Y    C +  +D  H V+ VGYG E    +   YWL+KNSWG  WG  GY K+   + N CG+AT ASYPVV
Sbjct:  232 EKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLD--HGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333          
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.367e-16
Identity = 46/102 (45.10%), Postives = 58/102 (56.86%), Query Frame = -1
Query:  291 GAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 590
            G ED L+ AV    PV V  +     F  Y+SGVY    C      VNH V+ +GYG  +G  YWL+KNSWG N+G+ GY +M   K N CGIA+  SYP +
Sbjct:  232 GREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPAC---TQKVNHGVLVIGYGDLNGKEYWLVKNSWGSNFGEQGYIRMARNKGNHCGIASYPSYPEI 330          
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.786e-16
Identity = 48/102 (47.06%), Postives = 58/102 (56.86%), Query Frame = -1
Query:  294 GAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV-PYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPV 590
            G E  L+HAV    PV V        FRFYK GVYS   CG      +HAV+AVGYG       YW++KNSWG +WG  GY  M   + NMC IA+ AS+P+
Sbjct:  298 GDELALKHAVAKRGPVVVGISGSKRSFRFYKDGVYSEGNCGRP----DHAVLAVGYGTHPSYGDYWIVKNSWGTDWGKDGYVYMARNRGNMCHIASAASFPI 395          
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.333e-16
Identity = 49/103 (47.57%), Postives = 58/103 (56.31%), Query Frame = -1
Query:  291 GAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 590
            G E  LQHAV    PVSV  +     F  Y  GVY    C +     NHAV AVGYG + +G  YW++KNSWG  WG+ GY KM   + N C IAT + YPVV
Sbjct:  223 GDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYYEPNCDS--WYANHAVTAVGYGTDANGGDYWIVKNSWGAWWGESGYIKMARNRDNNCAIATYSVYPVV 323          
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.046e-16
Identity = 47/109 (43.12%), Postives = 60/109 (55.05%), Query Frame = -1
Query:  288 ITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKME----MGKNMCGIATCASYPVVA 599
            +T   E  LQ AV   +PVSV  E     F+ Y SG+++   CG      NH VV VGYG + G  YW+++NSWG+NWG+ GY  ME        +CGIA   SYP  A
Sbjct:  112 VTRNNESALQSAVAS-QPVSVTVEAAGAPFQHYSSGIFTGP-CGTAQ---NHGVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTKA 215          
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.979e-16
Identity = 49/115 (42.61%), Postives = 67/115 (58.26%), Query Frame = -1
Query:  276 NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVVA*SAP 602
            ++   +E++L  AV   +PVSVA E     F FY  GV++   CG    +++H V  VGYGV EDG  YW +KNSWG +WG+ GY ++E        +CGIA  ASYPV   + P
Sbjct:  250 DVPANSEEDLARAVAN-QPVSVAVEASGKAFMFYSEGVFTGD-CGT---ELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKTYNKP 359          
The following BLAST results are available for this feature:
BLAST of DN617853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CYSP2_HORVU8.017e-1743.10Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSEP_PHAVU8.017e-1742.20Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
ACTN_ACTCH8.017e-1744.86Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
ACP1_ENTHI8.017e-1743.64Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
CATL1_MOUSE1.047e-1645.19Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CATS_SAIBB1.367e-1645.10Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CATL_BRUPA1.786e-1647.06Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
CRUST_PANBO2.333e-1647.57Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
ERVB_TABDI3.046e-1643.12Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CYSP1_HORVU3.979e-1642.61Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01M11_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617853 ID=DN617853; Name=DN617853; organism=Citrus sinensis; type=EST; length=617bp
TTTTTTTTTTTTCCATATAACAACTACCGTTGCATTGACAAAATATATAT
AACATCGGTTGGTGTCCTAGTCACAATGACTGTTTACATGGACATAGATC
TCAGAATTTATTTTGAACATCAAGCAGCCATGCATTGCTATTGTAGATTA
TATGGACATTAATCTCCGAATTTATTTCGTACATAAAGCCAACCATTCTG
CTATCATTCTTGAGTGAAATAATATAAGTTTTATGAGCAAATGACTTGCT
GATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTAAGCCACAACTGGG
TATGATGCACAAGTTGCAATACCACACATGTTCTTCCCCATCTCCATCTT
AAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAGCC
AATATGGAACACCATCTTCAACTCCGTACCCAACAGCAACGACGGCATGG
TTCACATCCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAACTCCACT
CTTGTAAAATCGGAATCCATCTACTACTTCAAATGCCACACTCACAGGTC
GAACAAGACCAACTGCATGCTGTAATTCATCTTCAGCACCCAAGGTAATG
TTGACTGAGTCCAGGAC
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