DN617853

Overview
NameDN617853
Unique NameDN617853
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length617
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.979e-16
Identity = 40/89 (44.94%), Postives = 61/89 (68.54%), Query Frame = -1
Query:  318 EDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 584
            E++L+  + +  P+SVA +V D    YK+G+  +  C N    +NHAV+ VGYGV++ VPYW++KNSWG  WG+ GYF+++  KN CG+
Sbjct:  239 ENKLRELLVVNGPISVAIDVSDLIN-YKAGI--ADICENNE-GLNHAVLLVGYGVKNDVPYWILKNSWGAEWGEEGYFRVQRDKNSCGM 323          
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: CATC_MOUSE (Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.979e-16
Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = -1
Query:  306 PVSVAFEVVDGFRFYKSGVYSSTKCGN--TPMDV-NHAVVAVGYGVED--GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCA 548
            P++VAFEV D F  Y SG+Y  T   +   P ++ NHAV+ VGYG +   G+ YW+IKNSWG NWG+ GYF++  G + C I + A
Sbjct:  368 PMAVAFEVHDDFLHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYGRDPVTGIEYWIIKNSWGSNWGESGYFRIRRGTDECAIESIA 453          
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.196e-16
Identity = 45/109 (41.28%), Postives = 64/109 (58.72%), Query Frame = -1
Query:  294 NITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 602
            N+ +  E+ L  AV   +PVSVA +     F+FY  GV++    G+   D+NH V  VGYG   DG  YW+++NSWG  WG+ GY +M+      + +CGIA  ASYP+
Sbjct:  241 NVPVNDENALLKAVAN-QPVSVAIDAGGSDFQFYSEGVFT----GDCNTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEQGYIRMQRNISKKEGLCGIAMMASYPI 344          
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.196e-16
Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = -1
Query:  318 EDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 584
            E++L+  + L  P+ VA +  D    Y+ G+     C N  +  NHAV+ VGYGVE+ VPYW++KNSWG +WG+ G+FK++   N CGI
Sbjct:  229 EEKLKDVLRLAGPIPVAIDASDILN-YEQGIIKY--CANNGL--NHAVLLVGYGVENNVPYWILKNSWGTDWGEQGFFKIQQNVNACGI 312          
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.196e-16
Identity = 44/105 (41.90%), Postives = 59/105 (56.19%), Query Frame = -1
Query:  291 AEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 587
            +ED L  AV  + P++   +   + F+ YK G+Y    C +    V H V+ VGYG +    DG  YWLIKNSWG+ WG  GY K+   K N CGIA+ A YP +
Sbjct:  232 SEDILMAAVATIGPITAGIDASHESFKNYKGGIYHEPNCSSDT--VTHGVLVVGYGFKGIETDGNHYWLIKNSWGKRWGIRGYMKLAKDKNNHCGIASYAHYPTI 334          
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.787e-16
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = -1
Query:  318 EDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 584
            E++L+  + +V P+ VA +  D    Y+ G+     C N     NHAV+ VGYGVE+ VPYW++KN+WGE+WG+ GYF+++   N CGI
Sbjct:  230 EEKLKDLLRIVGPIPVAIDASDIVN-YRRGIMRY--CSN--YGFNHAVLLVGYGVENNVPYWILKNTWGEDWGEQGYFRVQQNINACGI 313          
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: CATC_HUMAN (Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.787e-16
Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = -1
Query:  306 PVSVAFEVVDGFRFYKSGVYSSTKCGN--TPMDV-NHAVVAVGYGVED--GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCA 548
            P++VAFEV D F  YK G+Y  T   +   P ++ NHAV+ VGYG +   G+ YW++KNSWG  WG++GYF++  G + C I + A
Sbjct:  369 PMAVAFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIA 454          
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.864e-16
Identity = 47/104 (45.19%), Postives = 59/104 (56.73%), Query Frame = -1
Query:  291 EDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV----EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 584
            ED L +AV  + P+SVA +     F FYK G+Y    C +    V H+++ VGYG      DG  YWL+KNS G  WG+ GY K+   K N CGIAT A YP V
Sbjct:  232 EDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSSCV--VTHSMLLVGYGFTGRESDGRKYWLVKNSMGTQWGNKGYMKISRDKGNHCGIATYALYPRV 333          
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: CATC_BOVIN (Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.864e-16
Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = -1
Query:  306 PVSVAFEVVDGFRFYKSGVYSSTKCGN--TPMDV-NHAVVAVGYGVE--DGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCA 548
            P++VAFEV D F  Y+ GVY  T   +   P ++ NHAV+ VGYG +   G+ YW++KNSWG +WG++GYF++  G + C I + A
Sbjct:  369 PMAVAFEVYDDFLHYRKGVYHHTGLRDPFNPFELTNHAVLLVGYGTDAASGLDYWIVKNSWGTSWGENGYFRIRRGTDECAIESIA 454          
BLAST of DN617853 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.158e-15
Identity = 49/124 (39.52%), Postives = 65/124 (52.42%), Query Frame = -1
Query:  291 ITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP-------------------YWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 599
            +T G+E  L+ AV  V PVSVA +     F+ Y SG+Y   +C +  +D  H V+AVGYG   G                     YW++KNSWG +WG  GY  M   + N CGIA+ AS+PVV
Sbjct:  224 VTAGSESSLESAVN-VNPVSVAIDASHQSFQLYTSGIYYEPECSSENLD--HGVLAVGYGSGSGSSSGQSSGQSSGNLSASSSNEYWIVKNSWGTSWGIEGYILMSRNRDNNCGIASSASFPVV 344          
The following BLAST results are available for this feature:
BLAST of DN617853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CATV_GVCP3.979e-1644.94Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
CATC_MOUSE3.979e-1647.67Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=... [more]
CYSEP_VIGMU5.196e-1641.28Vignain OS=Vigna mungo PE=1 SV=1[more]
CATV_NPVEP5.196e-1643.82Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CATR_MOUSE5.196e-1641.90Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATV_NPVHC6.787e-1643.82Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CATC_HUMAN6.787e-1645.35Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=... [more]
CATM_MOUSE8.864e-1645.19Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]
CATC_BOVIN8.864e-1645.35Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 ... [more]
CYSP5_DICDI1.158e-1539.52Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01M11_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617853 ID=DN617853; Name=DN617853; organism=Citrus sinensis; type=EST; length=617bp
TTTTTTTTTTTTCCATATAACAACTACCGTTGCATTGACAAAATATATAT
AACATCGGTTGGTGTCCTAGTCACAATGACTGTTTACATGGACATAGATC
TCAGAATTTATTTTGAACATCAAGCAGCCATGCATTGCTATTGTAGATTA
TATGGACATTAATCTCCGAATTTATTTCGTACATAAAGCCAACCATTCTG
CTATCATTCTTGAGTGAAATAATATAAGTTTTATGAGCAAATGACTTGCT
GATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTAAGCCACAACTGGG
TATGATGCACAAGTTGCAATACCACACATGTTCTTCCCCATCTCCATCTT
AAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAGCC
AATATGGAACACCATCTTCAACTCCGTACCCAACAGCAACGACGGCATGG
TTCACATCCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAACTCCACT
CTTGTAAAATCGGAATCCATCTACTACTTCAAATGCCACACTCACAGGTC
GAACAAGACCAACTGCATGCTGTAATTCATCTTCAGCACCCAAGGTAATG
TTGACTGAGTCCAGGAC
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