DN617849

Overview
NameDN617849
Unique NameDN617849
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617849 vs. ExPASy Swiss-Prot
Match: G3P_SCLSC (Glyceraldehyde-3-phosphate dehydrogenase OS=Sclerotinia sclerotiorum GN=GPD PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.605e-26
Identity = 57/78 (73.08%), Postives = 65/78 (83.33%), Query Frame = -3
Query:  321 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 554
            DEIK  IK  + G LKGIL YTEDDVVSTD  GD+ SSIFDAKAGI+L+K FVKLVSWYDNEWGYS RV+DL+ ++SK
Sbjct:  256 DEIKEVIKKAANGPLKGILAYTEDDVVSTDMNGDNHSSIFDAKAGISLNKNFVKLVSWYDNEWGYSRRVLDLLHYISK 333          
BLAST of DN617849 vs. ExPASy Swiss-Prot
Match: G3P_CRYCU (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus curvatus GN=GPD PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.403e-26
Identity = 55/78 (70.51%), Postives = 67/78 (85.90%), Query Frame = -3
Query:  321 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 554
            D+IK  IK  SEG+LKGILGYTED+VVSTDF+G + SS+FDAKAGI L+ KFVKL+SWYDNE+GYS RV DLI +++K
Sbjct:  255 DQIKEVIKKASEGELKGILGYTEDEVVSTDFLGSTESSVFDAKAGIPLNDKFVKLISWYDNEYGYSRRVCDLIAYVAK 332          
BLAST of DN617849 vs. ExPASy Swiss-Prot
Match: G3P2_KLULA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces lactis GN=GAP2 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.444e-26
Identity = 58/78 (74.36%), Postives = 67/78 (85.90%), Query Frame = -3
Query:  321 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 554
            DEIKA IK  SE +LKGILGYTED VVS+DF+GD+ SSIFDA AGI LS KFVKLV+WYDNE+GYSTRVVDL+  ++K
Sbjct:  253 DEIKAVIKKASENELKGILGYTEDAVVSSDFLGDTNSSIFDAAAGIQLSPKFVKLVTWYDNEYGYSTRVVDLVELVAK 330          
BLAST of DN617849 vs. ExPASy Swiss-Prot
Match: G3P_COTJA (Glyceraldehyde-3-phosphate dehydrogenase OS=Coturnix coturnix japonica GN=GAPDH PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 5.804e-26
Identity = 57/80 (71.25%), Postives = 65/80 (81.25%), Query Frame = -3
Query:  315 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSKTQ 554
            D+IK  +KA +EG LKGILGYTED VVS DF GDS SS FDA AGIAL+  FVKLVSWYDNE+GYS RVVDL+VHM+  +
Sbjct:  254 DDIKRVVKAAAEGPLKGILGYTEDQVVSCDFNGDSHSSTFDAGAGIALNDNFVKLVSWYDNEFGYSNRVVDLMVHMASKE 333          
BLAST of DN617849 vs. ExPASy Swiss-Prot
Match: G3P3_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhizomucor racemosus GN=GPD3 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.804e-26
Identity = 59/78 (75.64%), Postives = 67/78 (85.90%), Query Frame = -3
Query:  324 DEIKAAIKAESEGK-LKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMS 554
            DEIKA IK  SE + LKGILGYTED VVSTDFVGD+ SSIFDAKAGI LS  FVKL+SWYDNE+GYSTRVVDL+ +++
Sbjct:  256 DEIKATIKKASESEELKGILGYTEDQVVSTDFVGDAHSSIFDAKAGIQLSPTFVKLISWYDNEFGYSTRVVDLLAYVA 333          
BLAST of DN617849 vs. ExPASy Swiss-Prot
Match: G3P1_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Saccharomyces cerevisiae GN=TDH1 PE=1 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 5.804e-26
Identity = 54/78 (69.23%), Postives = 68/78 (87.18%), Query Frame = -3
Query:  321 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 554
            D+IK A+KA +EG +KG+LGYTED VVS+DF+GD+ +SIFDA AGI LS KFVKL+SWYDNE+GYS RVVDLI +++K
Sbjct:  254 DQIKKAVKAAAEGPMKGVLGYTEDAVVSSDFLGDTHASIFDASAGIQLSPKFVKLISWYDNEYGYSARVVDLIEYVAK 331          
BLAST of DN617849 vs. ExPASy Swiss-Prot
Match: G3P1_CANGA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Candida glabrata GN=GPD1 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.804e-26
Identity = 57/78 (73.08%), Postives = 67/78 (85.90%), Query Frame = -3
Query:  321 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 554
            DEIKAAIK  SEG++KGIL YTED VVSTDF+GD+ SSIFDA AGI LS +FVKLVSWYDNE+G+S RVVD++  +SK
Sbjct:  254 DEIKAAIKKASEGEMKGILAYTEDAVVSTDFLGDTHSSIFDASAGIQLSPRFVKLVSWYDNEYGFSARVVDMVELVSK 331          
BLAST of DN617849 vs. ExPASy Swiss-Prot
Match: G3P_AJECA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ajellomyces capsulata GN=GPD PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.580e-26
Identity = 55/78 (70.51%), Postives = 66/78 (84.62%), Query Frame = -3
Query:  321 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 554
            D+IK  IK  SEG+LKGILGY+ED +VS+D  GDSRSSIFDA AGIAL+  F+KL+SWYDNEWGYS RVVDLI +++K
Sbjct:  255 DQIKQTIKKASEGELKGILGYSEDALVSSDLNGDSRSSIFDASAGIALNDHFIKLISWYDNEWGYSRRVVDLIAYIAK 332          
BLAST of DN617849 vs. ExPASy Swiss-Prot
Match: G3P_USTMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ustilago maydis GN=GAPD PE=3 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 9.900e-26
Identity = 55/78 (70.51%), Postives = 65/78 (83.33%), Query Frame = -3
Query:  321 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 554
            DEIKA +K  SE +LKGILGYTED VVS DF+G+S SSIFDA AGI+L+  FVKLVSWYDNEWGYS R +DL+V M++
Sbjct:  256 DEIKAEVKRASENELKGILGYTEDAVVSQDFIGNSHSSIFDAAAGISLNNNFVKLVSWYDNEWGYSNRCLDLLVFMAQ 333          
BLAST of DN617849 vs. ExPASy Swiss-Prot
Match: G3P_DEBHA (Glyceraldehyde-3-phosphate dehydrogenase OS=Debaryomyces hansenii GN=GPD PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.900e-26
Identity = 57/78 (73.08%), Postives = 65/78 (83.33%), Query Frame = -3
Query:  321 DEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMSK 554
            +EI  AIKA S G+LKGILGYTED VVSTDF+G   SSIFD KAGI LS  FVKL+SWYDNE+GYSTRVVDL+ H++K
Sbjct:  255 EEISEAIKAASNGELKGILGYTEDAVVSTDFLGSDYSSIFDQKAGILLSPTFVKLISWYDNEFGYSTRVVDLLEHVAK 332          
The following BLAST results are available for this feature:
BLAST of DN617849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
G3P_SCLSC2.605e-2673.08Glyceraldehyde-3-phosphate dehydrogenase OS=Sclero... [more]
G3P_CRYCU3.403e-2670.51Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
G3P2_KLULA4.444e-2674.36Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P_COTJA5.804e-2671.25Glyceraldehyde-3-phosphate dehydrogenase OS=Coturn... [more]
G3P3_RHIRA5.804e-2675.64Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhiz... [more]
G3P1_YEAST5.804e-2669.23Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Sacc... [more]
G3P1_CANGA5.804e-2673.08Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Cand... [more]
G3P_AJECA7.580e-2670.51Glyceraldehyde-3-phosphate dehydrogenase OS=Ajello... [more]
G3P_USTMA9.900e-2670.51Glyceraldehyde-3-phosphate dehydrogenase OS=Ustila... [more]
G3P_DEBHA9.900e-2673.08Glyceraldehyde-3-phosphate dehydrogenase OS=Debary... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01M09_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617849 ID=DN617849; Name=DN617849; organism=Citrus sinensis; type=EST; length=556bp
TTTTTTTTTTTTTTTTTGAAGAACCGGTCTTCGATACTAACTAGATGAAA
AATTATAAAAGCAAGTTTCCAATAGACAATTGTTTTCTCGCTAACAAAAC
ATAAGTTGGTTCACCAACTCTTCTTGCATACTACAAGGGAAAATCTAAGC
ACAACCCTGCATGAACAGGTAAGGCTCTGGATAATGTCTTGGAAACAATT
TTATTTAAACTCAAACCCTCTACATAGAAACACAAACACCACATTTAGCA
CAAAGAAACACCACACTTAGCACAACTAAGCGTGTTACATACTCAAGCCA
CGCCGAGTAAGTTACTGGGTCTTCGACATGTGGACAATCAAATCCACCAC
ACGAGTACTGTAGCCCCACTCATTGTCATACCATGAGACAAGCTTCACAA
ATTTCTTACTCAAAGCAATACCAGCCTTGGCATCAAAGATACTTGACCTA
CTGTCACCAACAAAGTCGGTGGATACCACATCATCCTCAGTGTATCCCAA
GATACCCTTTAGTTTCCCCTCTGACTCCGCCTTGATGGCAGCTTTGATTT
CATCAT
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