DN617848

Overview
NameDN617848
Unique NameDN617848
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length454
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7238 contig Csv1_Contig7238:40..493. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_ERWT9 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=metE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.907e-19
Identity = 43/100 (43.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:  142 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 441
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W+Q  +AG+  +P   F++YD VL T+ MLG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLQRELKKAQESYWAGNSTQEELLTVGRELRARHWQQQKDAGVNLLPVGDFAWYDHVLTTSLMLGNVPARHQNKDGSVDLDTLFRLGRGRA 104
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_SALSV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella schwarzengrund (strain CVM19633) GN=metE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.490e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:  142 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 441
            +H +G+PR+G +RELK A ES+W G S+ E L  V  +LR+  W+Q  +AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_SALPK (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella paratyphi A (strain AKU_12601) GN=metE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.490e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:  142 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 441
            +H +G+PR+G +RELK A ES+W G S+ E L  V  +LR+  W+Q  +AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_SALPB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=metE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.490e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:  142 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 441
            +H +G+PR+G +RELK A ES+W G S+ E L  V  +LR+  W+Q  +AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_SALPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella paratyphi A GN=metE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.490e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:  142 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 441
            +H +G+PR+G +RELK A ES+W G S+ E L  V  +LR+  W+Q  +AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_SALG2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=metE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.490e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:  142 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 441
            +H +G+PR+G +RELK A ES+W G S+ E L  V  +LR+  W+Q  +AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_SALEP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella enteritidis PT4 (strain P125109) GN=metE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.490e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:  142 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 441
            +H +G+PR+G +RELK A ES+W G S+ E L  V  +LR+  W+Q  +AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_SALA4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella agona (strain SL483) GN=metE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.490e-19
Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:  142 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 441
            +H +G+PR+G +RELK A ES+W G S+ E L  V  +LR+  W+Q  +AGI  +P   F++YD VL T+ +LG VP R+  N G +  D  F + RG A
Sbjct:    5 THTLGFPRVGLRRELKKAQESYWAGNSTREALLAVGRELRARHWEQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNNDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_LISW6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=metE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.490e-19
Identity = 46/101 (45.54%), Postives = 60/101 (59.41%), Query Frame = 1 
Query:  133 KMASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARG 435
            K  S  +GYPR+G KRE K ALE FW+G  + E+L   +  LR    K+  E GI  IP   FS+YDQVLDT+   G +P R+   GG +  + YF +ARG
Sbjct:    3 KAISSNLGYPRLGEKREWKRALEKFWNGTITEEELLAETKALRLHALKKQQEKGIDLIPVGDFSFYDQVLDTSVTFGIIPKRFQHEGGNVSLNTYFDIARG 103
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_SCHPO (Probable 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Schizosaccharomyces pombe GN=SPAC9.09 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.248e-19
Identity = 44/98 (44.90%), Postives = 60/98 (61.22%), Query Frame = 1 
Query:  142 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARG 435
            S ++G+PR+G  RELK A E++W GK+SAE+L   +  LR   WK     G+  IPSN FS YDQ++D +     +PPRY  +G     D YF+M RG
Sbjct:    4 SAVLGFPRIGKNRELKKATEAYWSGKTSAEELLATAKQLRLEHWKLQKAQGVDIIPSNDFSLYDQIMDHSFSFNVIPPRYRLSGLS-SLDTYFAMGRG 100
The following BLAST results are available for this feature:
BLAST of DN617848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
METE_ERWT91.907e-1943.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALSV2.490e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALPK2.490e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALPB2.490e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALPA2.490e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALG22.490e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALEP2.490e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALA42.490e-1944.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISW62.490e-1945.545-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SCHPO4.248e-1944.90Probable 5-methyltetrahydropteroyltriglutamate--ho... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01M08_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617848 ID=DN617848; Name=DN617848; organism=Citrus sinensis; type=EST; length=454bp
GTGACCAGTAACCACCAAACCAGATTGATTTTTGGTTATAAATAACGGAG
AGGGCACTCCTCCAAACTCGCCGCTCTCTTCTCTCTTTCTCCTCTCGACT
CTCAATTTCTCTGCTCTTCTTTCTCTGTTTGTAAAATGGCATCTCACATC
GTTGGATACCCACGCATGGGCCCCAAGAGGGAGCTCAAGTTCGCGTTGGA
ATCCTTCTGGGATGGCAAGAGCAGCGCCGAGGATTTGCAAAAGGTGTCCG
CTGATCTCAGATCCTCCATCTGGAAACAGATGTCCGAGGCCGGGATCAAA
TACATTCCCAGCAACACTTTCTCCTACTACGACCAAGTGCTCGACACCAC
CGCAATGCTCGGTGCCGTGCCACCTAGGTATAACTGGAACGGCGGCGAGA
TTGGATTCGATGTTTACTTCTCCATGGCCAGAGGAAACGCCTCTGTTCCC
GCTA
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