DN617848

Overview
NameDN617848
Unique NameDN617848
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length454
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7238 contig Csv1_Contig7238:40..493. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_SHIDS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=metE PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 7.246e-19
Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 1 
Query:  142 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 441
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  +AGI  +P   F++YD VL T+ +LG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_SHIBS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=metE PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 7.246e-19
Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 1 
Query:  142 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 441
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  +AGI  +P   F++YD VL T+ +LG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_SHIB3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=metE PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 7.246e-19
Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 1 
Query:  142 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 441
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  +AGI  +P   F++YD VL T+ +LG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_ESCF3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=metE PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 7.246e-19
Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 1 
Query:  142 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 441
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  +AGI  +P   F++YD VL T+ +LG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_ECOLI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain K12) GN=metE PE=1 SV=6)

HSP 1 Score: 92.8189 bits (229), Expect = 7.246e-19
Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 1 
Query:  142 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 441
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  +AGI  +P   F++YD VL T+ +LG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_ECOL5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 7.246e-19
Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 1 
Query:  142 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 441
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  +AGI  +P   F++YD VL T+ +LG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_ECODH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain K12 / DH10B) GN=metE PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 7.246e-19
Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 1 
Query:  142 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 441
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  +AGI  +P   F++YD VL T+ +LG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_ECO5E (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=metE PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 7.246e-19
Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 1 
Query:  142 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 441
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  +AGI  +P   F++YD VL T+ +LG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_ECO57 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O157:H7 GN=metE PE=3 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 7.246e-19
Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 1 
Query:  142 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 441
            +H +G+PR+G +RELK A ES+W G S+ E+L  V  +LR+  W Q  +AGI  +P   F++YD VL T+ +LG VP R+    G +  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRGRA 104
[Close]
BLAST of DN617848 vs. ExPASy Swiss-Prot
Match: METE_KLEP7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=metE PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 9.464e-19
Identity = 42/100 (42.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:  142 SHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVSADLRSSIWKQMSEAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYNWNGGEIGFDVYFSMARGNA 441
            +H +G+PR+G +RELK A ES+W G ++ E+L  V  +LR+  W+Q  +AG+  +P   F++YD VL T+ +LG VP R+    G I  D  F + RG A
Sbjct:    5 NHTLGFPRVGLRRELKKAQESYWAGNATREELLAVGRELRARHWEQQKQAGVDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSIDIDTLFRIGRGRA 104
The following BLAST results are available for this feature:
BLAST of DN617848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
METE_SHIDS7.246e-1943.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHIBS7.246e-1943.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHIB37.246e-1943.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ESCF37.246e-1943.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOLI7.246e-1943.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOL57.246e-1943.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECODH7.246e-1943.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO5E7.246e-1943.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO577.246e-1943.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_KLEP79.464e-1942.005-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01M08_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617848 ID=DN617848; Name=DN617848; organism=Citrus sinensis; type=EST; length=454bp
GTGACCAGTAACCACCAAACCAGATTGATTTTTGGTTATAAATAACGGAG
AGGGCACTCCTCCAAACTCGCCGCTCTCTTCTCTCTTTCTCCTCTCGACT
CTCAATTTCTCTGCTCTTCTTTCTCTGTTTGTAAAATGGCATCTCACATC
GTTGGATACCCACGCATGGGCCCCAAGAGGGAGCTCAAGTTCGCGTTGGA
ATCCTTCTGGGATGGCAAGAGCAGCGCCGAGGATTTGCAAAAGGTGTCCG
CTGATCTCAGATCCTCCATCTGGAAACAGATGTCCGAGGCCGGGATCAAA
TACATTCCCAGCAACACTTTCTCCTACTACGACCAAGTGCTCGACACCAC
CGCAATGCTCGGTGCCGTGCCACCTAGGTATAACTGGAACGGCGGCGAGA
TTGGATTCGATGTTTACTTCTCCATGGCCAGAGGAAACGCCTCTGTTCCC
GCTA
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