DN617842

Overview
NameDN617842
Unique NameDN617842
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617842 vs. ExPASy Swiss-Prot
Match: TAL_NEIM0 (Transaldolase OS=Neisseria meningitidis serogroup C (strain 053442) GN=tal PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.239e-17
Identity = 47/114 (41.23%), Postives = 66/114 (57.89%), Query Frame = 2
Query:  335 GQSPWYDNLCRPVT---DLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAK 667
            GQ  W DNL R +    +L  ++  GV GVTSNPAIFQKA +    Y D+   L Q     +  Y  + + D++ AC +  + ++ T G  G+VS+EVSP L+ D QGTVE A+
Sbjct:   11 GQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNPAIFQKAFAGDALYADEVAALKQQDLSPKQRYETMAVADVRAACGICLAEHESTGGKTGFVSLEVSPELSKDAQGTVEEAR 124          
BLAST of DN617842 vs. ExPASy Swiss-Prot
Match: TAL_NEIG2 (Transaldolase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=tal PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.239e-17
Identity = 47/114 (41.23%), Postives = 66/114 (57.89%), Query Frame = 2
Query:  335 GQSPWYDNLCRPVT---DLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAK 667
            GQ  W DNL R +    +L  ++  GV GVTSNPAIFQKA +    Y D+   L +     +  Y  + + D++ AC +  + ++ T G  G+VS+EVSP LA D QGTVE A+
Sbjct:   11 GQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNPAIFQKAFAGDALYADEVAALKRQNLSPKQRYETMAVADVRAACDVCLAEHESTGGKTGFVSLEVSPELAKDAQGTVEEAR 124          
BLAST of DN617842 vs. ExPASy Swiss-Prot
Match: TAL_NEIG1 (Transaldolase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=tal PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.239e-17
Identity = 47/114 (41.23%), Postives = 66/114 (57.89%), Query Frame = 2
Query:  335 GQSPWYDNLCRPVT---DLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAK 667
            GQ  W DNL R +    +L  ++  GV GVTSNPAIFQKA +    Y D+   L +     +  Y  + + D++ AC +  + ++ T G  G+VS+EVSP LA D QGTVE A+
Sbjct:   11 GQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNPAIFQKAFAGDALYADEVAALKRQNLSPKQRYETMAVADVRAACDVCLAEHESTGGKTGFVSLEVSPELAKDAQGTVEEAR 124          
BLAST of DN617842 vs. ExPASy Swiss-Prot
Match: TAL_NEIMA (Transaldolase OS=Neisseria meningitidis serogroup A GN=tal PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.230e-17
Identity = 47/114 (41.23%), Postives = 66/114 (57.89%), Query Frame = 2
Query:  335 GQSPWYDNLCRPVT---DLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAK 667
            GQ  W DNL R +    +L  ++  GV GVTSNPAIFQKA +    Y D+   L Q     +  Y  + + D++ AC +  + ++ T G  G+VS+EVSP L+ D QGTVE A+
Sbjct:   11 GQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNPAIFQKAFAGDALYADEVAALKQQDLTPKQRYETMAVADVRAACGVCLAEHESTGGKTGFVSLEVSPELSKDAQGTVEEAR 124          
BLAST of DN617842 vs. ExPASy Swiss-Prot
Match: TAL2_STRCO (Transaldolase 2 OS=Streptomyces coelicolor GN=tal2 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.233e-16
Identity = 51/116 (43.97%), Postives = 68/116 (58.62%), Query Frame = 2
Query:  332 EGQSPWYDNLCRP-VT--DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAK 667
            EG + W D+L R  +T  +L  LI    V GVT+NP+IFQKAIS  + Y+ Q  +L   G  +E A   +   D++DA  +   +YD T G DG VS+EV PRLA +T  TV  AK
Sbjct:   11 EGVAIWLDDLSRKRITSGNLAELIDQQHVVGVTTNPSIFQKAISQGDGYDQQLADLAVRGVTVEEAIRMITTADVRDAADILRPVYDNTGGKDGRVSIEVDPRLAHNTHATVAEAK 126          
BLAST of DN617842 vs. ExPASy Swiss-Prot
Match: TAL_FRASN (Transaldolase OS=Frankia sp. (strain EAN1pec) GN=tal PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16
Identity = 49/115 (42.61%), Postives = 65/115 (56.52%), Query Frame = 2
Query:  335 GQSPWYDNLCRP---VTDLLPLIAS-GVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAK 667
            G + W D++ R      +L  L  +  V GVTSNP IFQKAI     YN+Q R+L   G D+  A   +   DI+DAC +    YD + G DG VS+EV PRLA +T+ TV  A+
Sbjct:   12 GVAVWLDDISRERIRTGNLAELARTRSVVGVTSNPTIFQKAIGGGETYNEQLRDLAVRGVDVGEAVRAITAADIRDACDILRPAYDASAGVDGRVSLEVDPRLAHETERTVAEAR 126          
BLAST of DN617842 vs. ExPASy Swiss-Prot
Match: TAL1_STRAW (Transaldolase 1 OS=Streptomyces avermitilis GN=tal1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16
Identity = 50/116 (43.10%), Postives = 67/116 (57.76%), Query Frame = 2
Query:  332 EGQSPWYDNLCRP-VT--DLLPLIA-SGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAK 667
            EG S W D+L R  +T  +L  LIA   V GVT+NP+IFQ AI S   Y +Q  +L   G  ++ A   +   D++ A  +   +YD T G DG VS+EV PRLA DT+ T+  AK
Sbjct:   17 EGVSIWLDDLSRKRITSGNLAELIAHKHVVGVTTNPSIFQAAIGSGEGYEEQLADLAVRGVTVDEAVRMMTTADVRAAADILRPVYDATGGRDGRVSIEVDPRLAHDTEATIAEAK 132          
BLAST of DN617842 vs. ExPASy Swiss-Prot
Match: TAL_SACEN (Transaldolase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=tal PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 52/114 (45.61%), Postives = 70/114 (61.40%), Query Frame = 2
Query:  335 GQSPWYDNLCRPVTD---LLPLIAS-GVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAA 664
            G S W D+L R   +   L  LI+   V GVTSNP IF KA+S++  Y++Q REL   G  ++ A  EL  +DI++A  +F +IY+   G DG VS+EV PRLA DT+ TV  A
Sbjct:   14 GVSIWLDDLSRKRINSGNLAELISDYAVVGVTSNPTIFAKALSNAADYDEQVRELAARGASVDDAVRELTTRDIREAADIFRNIYEA--GHDGRVSLEVDPRLAHDTERTVAEA 125          
BLAST of DN617842 vs. ExPASy Swiss-Prot
Match: TAL_ACIC1 (Transaldolase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=tal PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 49/115 (42.61%), Postives = 65/115 (56.52%), Query Frame = 2
Query:  335 GQSPWYDNLCRP---VTDLLPLIASG-VRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAK 667
            G S W D++ R      +L  LI    V GVT+NP IF KAI  S  Y DQ R+L   G D+  A   L   D++ AC +   ++D T+G DG VS+EV PRLA DT+ T+  A+
Sbjct:   12 GVSIWIDDISRDRLQTGNLAALIRDRHVVGVTTNPTIFGKAIEGSARYQDQLRDLAVRGVDVNEALRALTAYDVRWACDVTRPVFDATDGVDGRVSIEVDPRLAHDTEATIAEAR 126          
BLAST of DN617842 vs. ExPASy Swiss-Prot
Match: TAL2_STRAW (Transaldolase 2 OS=Streptomyces avermitilis GN=tal2 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.781e-15
Identity = 49/117 (41.88%), Postives = 70/117 (59.83%), Query Frame = 2
Query:  329 QEGQSPWYDNLCRP-VT--DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAK 667
            +EG + W D+L R  +T  +L  LI    V GVT+NP+IFQKAIS  + Y+ Q  +L      +E A   +   D++DA  +   ++D T+G DG VS+EV PRLA +T+ TV  AK
Sbjct:   10 KEGVAIWLDDLSRKRITSGNLAELIDQQHVVGVTTNPSIFQKAISQGDGYDQQVSDLAARRVTVEEAIRMITTADVRDAADILRPVFDATDGQDGRVSIEVDPRLAHNTKATVAEAK 126          
The following BLAST results are available for this feature:
BLAST of DN617842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
TAL_NEIM04.239e-1741.23Transaldolase OS=Neisseria meningitidis serogroup ... [more]
TAL_NEIG24.239e-1741.23Transaldolase OS=Neisseria gonorrhoeae (strain NCC... [more]
TAL_NEIG14.239e-1741.23Transaldolase OS=Neisseria gonorrhoeae (strain ATC... [more]
TAL_NEIMA7.230e-1741.23Transaldolase OS=Neisseria meningitidis serogroup ... [more]
TAL2_STRCO1.233e-1643.97Transaldolase 2 OS=Streptomyces coelicolor GN=tal2... [more]
TAL_FRASN2.104e-1642.61Transaldolase OS=Frankia sp. (strain EAN1pec) GN=t... [more]
TAL1_STRAW3.588e-1643.10Transaldolase 1 OS=Streptomyces avermitilis GN=tal... [more]
TAL_SACEN6.121e-1645.61Transaldolase OS=Saccharopolyspora erythraea (stra... [more]
TAL_ACIC16.121e-1642.61Transaldolase OS=Acidothermus cellulolyticus (stra... [more]
TAL2_STRAW1.781e-1541.88Transaldolase 2 OS=Streptomyces avermitilis GN=tal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01M05_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617842 ID=DN617842; Name=DN617842; organism=Citrus sinensis; type=EST; length=670bp
ATCGTACTTGGTTGAAGCTTACAAATCGTCGCTCTTTATTTCTGAGTTTT
TAGATTCAAGGATCAACGAGTCTTTAATGGCGACCATTTCGAAGCTTACA
AATCCAGCTGTTTCTTCATCATCTTTGAAACCCAGATCATCATCATCCTC
ACTGCCTAAATCTTTGATCAGCCTTCAAACCAAAACTGGGTTCAATTCAA
AAGTTGCATCTTCTCAGTTGACCCTCAGAAATAACCACCCTTTGAAGGCC
TCTTTGGTTGTGAAATGTTCCCAATCTGGTGGAAATGGAAGTAGTGCAAA
GAGGACAACTCTTCATGATCTCTATGAGCAGGAAGGGCAGAGCCCTTGGT
ATGATAACCTTTGCCGCCCCGTCACAGATTTGCTTCCGCTCATTGCAAGT
GGTGTTAGAGGTGTTACCAGCAACCCTGCGATTTTCCAGAAAGCAATATC
TTCATCGAATGCTTACAATGATCAATTTAGGGAACTTGTACAATCTGGAA
AAGATATTGAAGCTGCATATTGGGAACTTGTGATTAAGGACATTCAAGAT
GCATGCAAACTTTTTGAGTCAATCTATGATGAAACCAATGGCGGTGATGG
CTATGTTTCTGTCGAAGTTTCTCCCAGACTCGCTGATGATACCCAAGGGA
CTGTGGAGGCAGCAAAATGG
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