DN617841

Overview
NameDN617841
Unique NameDN617841
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2701 contig Csv1_Contig2701:1067..1651. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL_ARTS2 (Transaldolase OS=Arthrobacter sp. (strain FB24) GN=tal PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 7.769e-19
Identity = 51/114 (44.74%), Postives = 68/114 (59.65%), Query Frame = -1 
Query:  242 GAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVS-RTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSLKLVS 580
            GA  QR LWAST VK+P+YPDTLYV  L+ P  V+TMP++ L A  DHG V+  T+     +A    +AL+ LGI +N V   LE EG+D F  S+  LL  ++    S +  S
Sbjct:  258 GALPQRPLWASTGVKDPSYPDTLYVTELVAPGVVNTMPEKTLDATFDHGVVTGDTVTRGYDDANATLNALDALGISYNDVVALLESEGLDKFVASWKELLGDVEGALASARKAS 371
[Close]
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL_MYCLE (Transaldolase OS=Mycobacterium leprae GN=tal PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.015e-18
Identity = 49/111 (44.14%), Postives = 69/111 (62.16%), Query Frame = -1 
Query:  254 KGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSL 583
            +GA+ QR LWAST VKNP Y DTLYV  L+ P+TV+TMP+  + A  DHG +   TI      ++ ++ +L  +G+D   V   LE EGV  F KS++ LL   QE+ +S+
Sbjct:  263 RGAQVQRPLWASTGVKNPDYADTLYVTELVAPNTVNTMPETTIDAVADHGVIRGDTISGTTLSSQKVFDSLVAVGVDLIDVFAVLEHEGVQKFVKSWNELLKETQEQLDSV 373
[Close]
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL_MYCLB (Transaldolase OS=Mycobacterium leprae (strain Br4923) GN=tal PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.015e-18
Identity = 49/111 (44.14%), Postives = 69/111 (62.16%), Query Frame = -1 
Query:  254 KGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSL 583
            +GA+ QR LWAST VKNP Y DTLYV  L+ P+TV+TMP+  + A  DHG +   TI      ++ ++ +L  +G+D   V   LE EGV  F KS++ LL   QE+ +S+
Sbjct:  263 RGAQVQRPLWASTGVKNPDYADTLYVTELVAPNTVNTMPETTIDAVADHGVIRGDTISGTTLSSQKVFDSLVAVGVDLIDVFAVLEHEGVQKFVKSWNELLKETQEQLDSV 373
[Close]
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL_MYCTU (Transaldolase OS=Mycobacterium tuberculosis GN=tal PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.855e-18
Identity = 47/100 (47.00%), Postives = 63/100 (63.00%), Query Frame = -1 
Query:  284 GAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLL 580
            GA+ QR LWAST VKNP Y DTLYV  L+ P TV+TMP++ + A  DHG +   T+    S+A+ ++  L  +GID   V   LE EGV  F+ S++ LL
Sbjct:  262 GARVQRPLWASTGVKNPDYSDTLYVTELVAPHTVNTMPEKTIDAVADHGVIQGDTVTGTASDAQAVFDQLGAIGIDLTDVFAVLEEEGVRKFEASWNELL 361
[Close]
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL_MYCTA (Transaldolase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=tal PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.855e-18
Identity = 47/100 (47.00%), Postives = 63/100 (63.00%), Query Frame = -1 
Query:  284 GAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLL 580
            GA+ QR LWAST VKNP Y DTLYV  L+ P TV+TMP++ + A  DHG +   T+    S+A+ ++  L  +GID   V   LE EGV  F+ S++ LL
Sbjct:  262 GARVQRPLWASTGVKNPDYSDTLYVTELVAPHTVNTMPEKTIDAVADHGVIQGDTVTGTASDAQAVFDQLGAIGIDLTDVFAVLEEEGVRKFEASWNELL 361
[Close]
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL_MYCBT (Transaldolase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=tal PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.855e-18
Identity = 47/100 (47.00%), Postives = 63/100 (63.00%), Query Frame = -1 
Query:  284 GAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLL 580
            GA+ QR LWAST VKNP Y DTLYV  L+ P TV+TMP++ + A  DHG +   T+    S+A+ ++  L  +GID   V   LE EGV  F+ S++ LL
Sbjct:  262 GARVQRPLWASTGVKNPDYSDTLYVTELVAPHTVNTMPEKTIDAVADHGVIQGDTVTGTASDAQAVFDQLGAIGIDLTDVFAVLEEEGVRKFEASWNELL 361
[Close]
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL_MYCBP (Transaldolase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=tal PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.855e-18
Identity = 47/100 (47.00%), Postives = 63/100 (63.00%), Query Frame = -1 
Query:  284 GAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLL 580
            GA+ QR LWAST VKNP Y DTLYV  L+ P TV+TMP++ + A  DHG +   T+    S+A+ ++  L  +GID   V   LE EGV  F+ S++ LL
Sbjct:  262 GARVQRPLWASTGVKNPDYSDTLYVTELVAPHTVNTMPEKTIDAVADHGVIQGDTVTGTASDAQAVFDQLGAIGIDLTDVFAVLEEEGVRKFEASWNELL 361
[Close]
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL_MYCBO (Transaldolase OS=Mycobacterium bovis GN=tal PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.855e-18
Identity = 47/100 (47.00%), Postives = 63/100 (63.00%), Query Frame = -1 
Query:  284 GAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLL 580
            GA+ QR LWAST VKNP Y DTLYV  L+ P TV+TMP++ + A  DHG +   T+    S+A+ ++  L  +GID   V   LE EGV  F+ S++ LL
Sbjct:  262 GARVQRPLWASTGVKNPDYSDTLYVTELVAPHTVNTMPEKTIDAVADHGVIQGDTVTGTASDAQAVFDQLGAIGIDLTDVFAVLEEEGVRKFEASWNELL 361
[Close]
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL_THEFY (Transaldolase OS=Thermobifida fusca (strain YX) GN=tal PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.035e-18
Identity = 48/106 (45.28%), Postives = 65/106 (61.32%), Query Frame = -1 
Query:  266 GAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVS-RTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEK 580
            GA+ QR LWAST VK+P  PDTLYV  L+ P TV+TMP   L A  DHG ++  T+  +   A     A+E +G+  + V   LE EGVD F KS++ LLD + ++
Sbjct:  258 GARPQRPLWASTGVKDPELPDTLYVTELVAPGTVNTMPQATLDAVADHGTITGDTVRGHYDAARAHLDAVESVGVSMSDVVETLEDEGVDKFVKSWEELLDRVAQQ 363
[Close]
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL2_STRCO (Transaldolase 2 OS=Streptomyces coelicolor GN=tal2 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.035e-18
Identity = 49/112 (43.75%), Postives = 69/112 (61.61%), Query Frame = -1 
Query:  254 KKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVS-RTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSL 586
            K GA KQR LWAST VK+ AY DT+YV  L+ P+TV+TMP+  L A  DHG ++   +  +   A     A+EKLGI ++ V   LE EGVD F+ +++ LL + + +   L
Sbjct:  256 KAGANKQRPLWASTGVKDKAYSDTMYVTDLVAPNTVNTMPEATLLATEDHGEITGDAVAGSYERARADLDAIEKLGISYDEVVQLLEKEGVDKFEDAWNDLLKSTEAELKRL 367
The following BLAST results are available for this feature:
BLAST of DN617841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
TAL_ARTS27.769e-1944.74Transaldolase OS=Arthrobacter sp. (strain FB24) GN... [more]
TAL_MYCLE1.015e-1844.14Transaldolase OS=Mycobacterium leprae GN=tal PE=3 ... [more]
TAL_MYCLB1.015e-1844.14Transaldolase OS=Mycobacterium leprae (strain Br49... [more]
TAL_MYCTU3.855e-1847.00Transaldolase OS=Mycobacterium tuberculosis GN=tal... [more]
TAL_MYCTA3.855e-1847.00Transaldolase OS=Mycobacterium tuberculosis (strai... [more]
TAL_MYCBT3.855e-1847.00Transaldolase OS=Mycobacterium bovis (strain BCG /... [more]
TAL_MYCBP3.855e-1847.00Transaldolase OS=Mycobacterium bovis (strain BCG /... [more]
TAL_MYCBO3.855e-1847.00Transaldolase OS=Mycobacterium bovis GN=tal PE=3 S... [more]
TAL_THEFY5.035e-1845.28Transaldolase OS=Thermobifida fusca (strain YX) GN... [more]
TAL2_STRCO5.035e-1843.75Transaldolase 2 OS=Streptomyces coelicolor GN=tal2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01M05_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617841 ID=DN617841; Name=DN617841; organism=Citrus sinensis; type=EST; length=586bp
TTTTTTTTTTTTTTTTCGGCACTAAAACACTTATCATACATAATAATTAT
TGTCATACAGATTATGAGAAGTGGATTGAAAACCCACTAGATTTATTTCA
GTCACAAGGGAAAATAAGAGTCCGTTTGGGGCAGCTGCGCTGCATTCTTG
GTGAAAATTTCTCCAAAAACATAGGTGAGGGCACAGCGCAGCTGCCCCAA
GTGGGTTTTAAGCAAAAAAAAAAACCAATTACAGTTTACAGACTAACCAG
CTTGAGAGAGTTTGCCTTCTCTTGCAGGGTATCCAGCAGACTATCAAAGC
TCTTCTTGAAAGAATCTACCCCTTCAAGTTCGAGTTGAGTGCCAACGTAG
TTCCAATCAATTCCCAACTTCTCCAGTGCACTGTAAATGCCTTCAGCTTC
AGAAACATTCAAGTCAATTGTTCTTGAAACTGCACCATGATCAACAAATG
CTTGGAGAGCTTGGTCTGGCATGGTTGAAACCGTATCAGGTCCAATGAGA
GGAGCAACATATAGAGTGTCAGGGTAGGCAGGATTCTTTACACTGGTTGA
GGCCCACAGAAGTCTCTGCTTCTTTGCACCTTTCTT
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