DN617833

Overview
NameDN617833
Unique NameDN617833
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length494
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13457 contig Csv1_Contig13457:67..558. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 3.277e-29
Identity = 61/118 (51.69%), Postives = 80/118 (67.80%), Query Frame = -1
Query:  141 EVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLG---LDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRAL 485
            EV GF +P   +++VN WAIGRD  +W+NP  F PERFL      +D +G +FELIPFGAGRRIC G  +    +  +LG+L++SFDWKL DGV    ++MEE FG+ LQK  PL A+
Sbjct:  396 EVDGFHIPKNTRLIVNIWAIGRDPKVWENPLDFTPERFLSEKHAKIDPRGNHFELIPFGAGRRICAGARMGAASVEYILGTLVHSFDWKLPDGVV--EVNMEESFGIALQKKVPLSAI 511          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 9.534e-29
Identity = 54/115 (46.96%), Postives = 78/115 (67.83%), Query Frame = -1
Query:  138 VAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALP 482
            +  + +P   Q++VN W IGRD   W +P +F PERFL   +D +G +F LIPFGAGRRICPGLP+A + + L++ + + + DW L +G++   + +EEKFGLTLQK  PL  +P
Sbjct:  369 ILNYTIPKDCQIMVNAWGIGRDPKTWTDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPLFIVP 483          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.626e-28
Identity = 54/115 (46.96%), Postives = 78/115 (67.83%), Query Frame = -1
Query:  138 VAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALP 482
            +  + +P   Q++VN W IGRD   W +P +F PERFL   +D +G +F LIPFGAGRRICPGLP+A + + L++ + + + DW L +G++   + +EEKFGLTLQK  PL  +P
Sbjct:  370 ILNYTIPKDCQIMVNAWGIGRDPKTWIDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPLFIVP 484          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.124e-28
Identity = 51/119 (42.86%), Postives = 82/119 (68.91%), Query Frame = -1
Query:  135 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALPI 491
            D ++ G+ +P    + VN WAI R+ ++W +P +F+PERF+   +D KG NFEL+PFG+GRRICPG+ + + +++L L +L+  FDWKL +G+  + +D+EE +GL   K  PL  +P+
Sbjct:  373 DVKIGGYNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDNQIDYKGLNFELLPFGSGRRICPGIGMGMALIHLTLINLLYRFDWKLPEGMEVEDVDLEESYGLVCPKKVPLELIPV 491          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 2.774e-28
Identity = 61/117 (52.14%), Postives = 81/117 (69.23%), Query Frame = -1
Query:  141 VAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLG---LDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRAL 482
            + G+ +P   ++ VN WAIGRD  +W+NP  F+PERFL      ++ +G +FELIPFGAGRRIC G  + I M+  +LG+LI+SFDWKL + V    I+MEE FGL LQKA PL A+
Sbjct:  383 IDGYYIPKNTRLSVNIWAIGRDPDVWENPLEFIPERFLSEKNAKIEHRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLIHSFDWKLPNDVV--DINMEETFGLALQKAVPLEAI 497          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 2.774e-28
Identity = 58/119 (48.74%), Postives = 84/119 (70.59%), Query Frame = -1
Query:  129 EVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALPIAI 485
            +V G+ +P   ++LVNTWAIGRD +LW NP  F PERF+   +D +G++FEL+PFG+GRRICPG+ L I ++ L L +L+  FDW+  DG+T + ID EE   LT+ K  PL+ +P+ +
Sbjct:  383 KVQGYDIPPKRRILVNTWAIGRDPTLWINPEEFNPERFINNPVDYRGQHFELLPFGSGRRICPGMGLGITIVELGLLNLLYFFDWRAPDGMTHKDIDTEEAGILTVVKKVPLKLVPVRV 501          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 3.623e-28
Identity = 51/119 (42.86%), Postives = 82/119 (68.91%), Query Frame = -1
Query:  135 DTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALPI 491
            D ++ G+ +P    + VN WAI R+ ++W +P +F+PERF+   +D KG NFEL+PFG+GRRICPG+ + + +++L L +L+  FDWKL +G+    +D+EE +GL   K  PL+ +P+
Sbjct:  373 DVKIGGYNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDSQIDYKGLNFELLPFGSGRRICPGIGMGMALVHLTLINLLYRFDWKLPEGMKVADVDLEESYGLVCPKKIPLQLIPV 491          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 4.732e-28
Identity = 62/118 (52.54%), Postives = 81/118 (68.64%), Query Frame = -1
Query:  141 EVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFL---GLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRAL 485
            EV G  +P G ++ VN WAIGRD SLW+NP  F P+RFL      +D +G +FELIPFGAGRRIC G  L I ++  +LG+L++SFDW+L   V    ++M+E FGL LQKA PL A+
Sbjct:  383 EVNGHYIPKGTRLSVNIWAIGRDPSLWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFDWELPSSVI--ELNMDEPFGLALQKAVPLAAM 498          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 6.180e-28
Identity = 63/121 (52.07%), Postives = 84/121 (69.42%), Query Frame = -1
Query:  135 EVAGFMVPNGAQVLVNTWAIGRDASLW-DNPYSFVPERFL---GLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALPI 485
            +V G+ +P G ++ VN WAIGRD S+W DNP  F PERFL      +D +G +FELIPFGAGRRIC G  + I ++  +LG+L++SFDWKL  G +   ++M+E FGL LQKA PL A+ I
Sbjct:  388 DVNGYYIPKGTRLNVNIWAIGRDPSVWGDNPNEFDPERFLYGRNAKIDPRGNHFELIPFGAGRRICAGTRMGILLVEYILGTLVHSFDWKL--GFSEDELNMDETFGLALQKAVPLAAMVI 506          
BLAST of DN617833 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 6.180e-28
Identity = 58/122 (47.54%), Postives = 83/122 (68.03%), Query Frame = -1
Query:  129 ADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPQTIDMEEKFGLTLQKARPLRALPIAI 494
            A  +V G+ +P   ++LVN  AIGRD  LW NP  F PERF+   +D +G+++EL+PFG+GRRICPG+P+ I  + L L +L+  FDWKL DG+T + ID EE   LT+ K  PL+ +P+ +
Sbjct:  380 AHIKVQGYDIPPKRRILVNVSAIGRDPKLWTNPEEFDPERFMDSSVDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDWKLPDGMTHKDIDTEEAGTLTIVKKVPLQLVPVRV 501          
The following BLAST results are available for this feature:
BLAST of DN617833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
C75A6_CAMME3.277e-2951.69Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C80B1_ESCCA9.534e-2946.96(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C80B2_ESCCA1.626e-2846.96(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C71BD_ARATH2.124e-2842.86Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C75A2_SOLME2.774e-2852.14Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C71BG_ARATH2.774e-2848.74Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71BC_ARATH3.623e-2842.86Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C75A5_EUSGR4.732e-2852.54Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C75A4_GENTR6.180e-2852.07Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C71BK_ARATH6.180e-2847.54Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L24_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617833 ID=DN617833; Name=DN617833; organism=Citrus sinensis; type=EST; length=494bp
TCAAAATAGATTTATTCGAATAAGAATAAACATTGTACAAGCATACCGAG
TAAGGACAAAGTCCATGCTACAACCTGGAAATTCATTTCATTATAGCACC
AAAAAAAAAAAAAAAATGCTACTAATTAAATGGCAATAGGAAGAGCACGA
AGGGGCCGAGCCTTCTGCAAGGTGAGACCAAATTTCTCTTCCATATCTAT
GGTCTGTGGAGTAACCCCATCTTCAAGTTTCCAATCAAAAGAATTAATAA
GTGAACCTAACATCAAATATAACATTCTTATTGCCAACGGCAAGCCAGGA
CATATTCGTCGTCCGGCGCCAAACGGTATTAGTTCAAAATTCCGACCTTT
GACATCAAGATCTAACCCCAAGAACCTCTCTGGAACAAAAGAGTATGGGT
TGTCCCATAAGCTAGCATCTCTTCCTATAGCCCATGTGTTGACTAAGACT
TGTGCACCATTTGGCACCATGAATCCGGCAACTTCTGTATCTGC
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